Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:55:30 (27056): wrapper (7.7.26015): starting
23:55:30 (27056): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:55:30] Arguments: --nthreads 8
[2025-11-26 23:55:30] Threads: 8
[2025-11-26 23:55:30] Checking for CVMFS
[2025-11-26 23:55:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:55:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:55:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:55:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:55:31] 2.11.2.0 2756 74288 85904 153347 3 81 18404766 20275200 1 130560 0 22770388 99.909 3578876 30850 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 23:55:31] CVMFS is ok
[2025-11-26 23:55:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:55:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:55:31] Further information can be found at the LHC@home message board.
[2025-11-26 23:55:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:55:31] Checking for apptainer binary...
[2025-11-26 23:55:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:55:31] Running /usr/bin/apptainer --version
[2025-11-26 23:55:31] apptainer version 1.3.2-1.el7
[2025-11-26 23:55:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:55:32] c-115-14.aglt2.org
[2025-11-26 23:55:32] apptainer works
[2025-11-26 23:55:32] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:55:32] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:55:32] Starting ATLAS job with PandaID=6897488212
[2025-11-26 23:55:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:54:00]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:54:00] 2025-11-27 15:53:12,896 | INFO     | monitor loop #2909: job 0:6897488212 is in state 'finished'
[2025-11-27 10:54:00] 2025-11-27 15:53:12,896 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:54:00] 2025-11-27 15:53:13,427 | INFO     | PID=30728 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 10:54:00] 2025-11-27 15:53:14,428 | INFO     | time since job start (39445s) is within the limit (172800.0s)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,204 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 10:54:00] 2025-11-27 15:53:15,208 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-27 10:54:00] 2025-11-27 15:53:15,210 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897488212/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,211 | INFO     | extracted standard info from prmon json
[2025-11-27 10:54:00] 2025-11-27 15:53:15,211 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:54:00] 2025-11-27 15:53:15,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:54:00] 2025-11-27 15:53:15,221 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:54:00] 2025-11-27 15:53:15,221 | INFO     | sum of square deviations: 83594235541.8159
[2025-11-27 10:54:00] 2025-11-27 15:53:15,229 | INFO     | sum of deviations: 655785211852.0002
[2025-11-27 10:54:00] 2025-11-27 15:53:15,229 | INFO     | mean x: 1764239054.131579
[2025-11-27 10:54:00] 2025-11-27 15:53:15,229 | INFO     | mean y: 3236820.1764705884
[2025-11-27 10:54:00] 2025-11-27 15:53:15,230 | INFO     | intersect: -13836974462.00589
[2025-11-27 10:54:00] 2025-11-27 15:53:15,230 | INFO     | chi2: 6.151721227820613
[2025-11-27 10:54:00] 2025-11-27 15:53:15,231 | INFO     | sum of square deviations: 81668305262.30586
[2025-11-27 10:54:00] 2025-11-27 15:53:15,239 | INFO     | sum of deviations: 896542967506.6538
[2025-11-27 10:54:00] 2025-11-27 15:53:15,239 | INFO     | mean x: 1764238901.6365054
[2025-11-27 10:54:00] 2025-11-27 15:53:15,239 | INFO     | mean y: 3255876.7925117007
[2025-11-27 10:54:00] 2025-11-27 15:53:15,240 | INFO     | intersect: -19364306302.72924
[2025-11-27 10:54:00] 2025-11-27 15:53:15,240 | INFO     | chi2: 3.0058798211572393
[2025-11-27 10:54:00] 2025-11-27 15:53:15,240 | INFO     | current chi2=3.0058798211572393 (change=51.13758068939447 %)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,241 | INFO     | sum of square deviations: 79772189495.26407
[2025-11-27 10:54:00] 2025-11-27 15:53:15,249 | INFO     | sum of deviations: 970840300224.6885
[2025-11-27 10:54:00] 2025-11-27 15:53:15,249 | INFO     | mean x: 1764238749.1415095
[2025-11-27 10:54:00] 2025-11-27 15:53:15,249 | INFO     | mean y: 3261840.970125786
[2025-11-27 10:54:00] 2025-11-27 15:53:15,249 | INFO     | intersect: -21467805804.556355
[2025-11-27 10:54:00] 2025-11-27 15:53:15,250 | INFO     | chi2: 2.5718142501753607
[2025-11-27 10:54:00] 2025-11-27 15:53:15,250 | INFO     | current chi2=2.5718142501753607 (change=14.440549749416359 %)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,250 | INFO     | right removable region: 635
[2025-11-27 10:54:00] 2025-11-27 15:53:15,251 | INFO     | sum of square deviations: 81668056382.30588
[2025-11-27 10:54:00] 2025-11-27 15:53:15,259 | INFO     | sum of deviations: 452051197607.1896
[2025-11-27 10:54:00] 2025-11-27 15:53:15,259 | INFO     | mean x: 1764239206.6365054
[2025-11-27 10:54:00] 2025-11-27 15:53:15,259 | INFO     | mean y: 3252918.9235569425
[2025-11-27 10:54:00] 2025-11-27 15:53:15,259 | INFO     | intersect: -9762210856.682856
[2025-11-27 10:54:00] 2025-11-27 15:53:15,260 | INFO     | chi2: 3.751865485505247
[2025-11-27 10:54:00] 2025-11-27 15:53:15,260 | INFO     | current chi2=3.751865485505247 (change=39.01112637325358 %)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,261 | INFO     | sum of square deviations: 79771770059.82355
[2025-11-27 10:54:00] 2025-11-27 15:53:15,268 | INFO     | sum of deviations: 414757629474.3777
[2025-11-27 10:54:00] 2025-11-27 15:53:15,268 | INFO     | mean x: 1764239359.1383648
[2025-11-27 10:54:00] 2025-11-27 15:53:15,269 | INFO     | mean y: 3255915.882075472
[2025-11-27 10:54:00] 2025-11-27 15:53:15,269 | INFO     | intersect: -9169559653.747044
[2025-11-27 10:54:00] 2025-11-27 15:53:15,269 | INFO     | chi2: 3.720177966894017
[2025-11-27 10:54:00] 2025-11-27 15:53:15,269 | INFO     | current chi2=3.720177966894017 (change=0.8445803489930552 %)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,270 | INFO     | left removable region: 20
[2025-11-27 10:54:00] 2025-11-27 15:53:15,270 | INFO     | sum of square deviations: 72128102162.13667
[2025-11-27 10:54:00] 2025-11-27 15:53:15,277 | INFO     | sum of deviations: 669932499026.7263
[2025-11-27 10:54:00] 2025-11-27 15:53:15,278 | INFO     | mean x: 1764239328.6487806
[2025-11-27 10:54:00] 2025-11-27 15:53:15,278 | INFO     | mean y: 3286232.369105691
[2025-11-27 10:54:00] 2025-11-27 15:53:15,278 | INFO     | intersect: -16383132193.920166
[2025-11-27 10:54:00] 2025-11-27 15:53:15,278 | INFO     | chi2: 0.08919575947968057
[2025-11-27 10:54:00] 2025-11-27 15:53:15,279 | INFO     | current memory leak: 9.29 B/s (using 615 data points, chi2=0.09)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,279 | INFO     | could have reported an average CPU frequency of 2396 MHz (25 samples)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,279 | INFO     | ..............................
[2025-11-27 10:54:00] 2025-11-27 15:53:15,279 | INFO     | . Timing measurements:
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | . get job = 0 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | . initial setup = 2 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | . payload setup = 8 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | . stage-in = 0 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | . payload execution = 39404 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | . stage-out = 3 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | . log creation = 0 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,280 | INFO     | ..............................
[2025-11-27 10:54:00] 2025-11-27 15:53:15,359 | INFO     | 
[2025-11-27 10:54:00] 2025-11-27 15:53:15,359 | INFO     | job summary report
[2025-11-27 10:54:00] 2025-11-27 15:53:15,360 | INFO     | --------------------------------------------------
[2025-11-27 10:54:00] 2025-11-27 15:53:15,360 | INFO     | PanDA job id: 6897488212
[2025-11-27 10:54:00] 2025-11-27 15:53:15,360 | INFO     | task id: 47556161
[2025-11-27 10:54:00] 2025-11-27 15:53:15,360 | INFO     | errors: (none)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,360 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:54:00] 2025-11-27 15:53:15,361 | INFO     | pilot state: finished 
[2025-11-27 10:54:00] 2025-11-27 15:53:15,361 | INFO     | transexitcode: 0
[2025-11-27 10:54:00] 2025-11-27 15:53:15,361 | INFO     | exeerrorcode: 0
[2025-11-27 10:54:00] 2025-11-27 15:53:15,361 | INFO     | exeerrordiag: 
[2025-11-27 10:54:00] 2025-11-27 15:53:15,361 | INFO     | exitcode: 0
[2025-11-27 10:54:00] 2025-11-27 15:53:15,361 | INFO     | exitmsg: OK
[2025-11-27 10:54:00] 2025-11-27 15:53:15,362 | INFO     | cpuconsumptiontime: 305819 s
[2025-11-27 10:54:00] 2025-11-27 15:53:15,362 | INFO     | nevents: 1000
[2025-11-27 10:54:00] 2025-11-27 15:53:15,362 | INFO     | neventsw: 0
[2025-11-27 10:54:00] 2025-11-27 15:53:15,362 | INFO     | pid: 4869
[2025-11-27 10:54:00] 2025-11-27 15:53:15,362 | INFO     | pgrp: 4869
[2025-11-27 10:54:00] 2025-11-27 15:53:15,362 | INFO     | corecount: 8
[2025-11-27 10:54:00] 2025-11-27 15:53:15,363 | INFO     | event service: False
[2025-11-27 10:54:00] 2025-11-27 15:53:15,363 | INFO     | sizes: {0: 2284151, 1: 2284293, 6: 2284555, 11: 2284583, 39416: 2327948, 39420: 2336942, 39423: 2337126, 39428: 2337436}
[2025-11-27 10:54:00] 2025-11-27 15:53:15,363 | INFO     | --------------------------------------------------
[2025-11-27 10:54:00] 2025-11-27 15:53:15,363 | INFO     | 
[2025-11-27 10:54:00] 2025-11-27 15:53:15,363 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 10:54:00] 2025-11-27 15:53:15,390 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,407 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,407 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,407 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,407 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,409 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:54:00] 2025-11-27 15:53:15,409 | INFO     | job 6897488212 has completed (purged errors)
[2025-11-27 10:54:00] 2025-11-27 15:53:15,409 | INFO     | overall cleanup function is called
[2025-11-27 10:54:00] 2025-11-27 15:53:16,422 | INFO     | --- collectZombieJob: --- 10, [4869]
[2025-11-27 10:54:00] 2025-11-27 15:53:16,422 | INFO     | zombie collector waiting for pid 4869
[2025-11-27 10:54:00] 2025-11-27 15:53:16,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:54:00] 2025-11-27 15:53:16,423 | INFO     | collected zombie processes
[2025-11-27 10:54:00] 2025-11-27 15:53:16,423 | INFO     | will attempt to kill all subprocesses of pid=4869
[2025-11-27 10:54:00] 2025-11-27 15:53:16,507 | INFO     | process IDs to be killed: [4869] (in reverse order)
[2025-11-27 10:54:00] 2025-11-27 15:53:16,563 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:54:00] 2025-11-27 15:53:16,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:54:00] 2025-11-27 15:53:16,568 | INFO     | did not find any defunct processes belonging to 4869
[2025-11-27 10:54:00] 2025-11-27 15:53:16,572 | INFO     | did not find any defunct processes belonging to 4869
[2025-11-27 10:54:00] 2025-11-27 15:53:16,574 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:54:00] 2025-11-27 15:53:16,574 | INFO     | ready for new job
[2025-11-27 10:54:00] 2025-11-27 15:53:16,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:54:00] 2025-11-27 15:53:16,577 | INFO     | ***************************************
[2025-11-27 10:54:00] 2025-11-27 15:53:16,577 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:54:00] 2025-11-27 15:53:16,577 | INFO     | ***************************************
[2025-11-27 10:54:00] 2025-11-27 15:53:16,577 | INFO     | 
[2025-11-27 10:54:00] 2025-11-27 15:53:16,578 | INFO     | architecture information:
[2025-11-27 10:54:00] 2025-11-27 15:53:16,579 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:54:00] 2025-11-27 15:53:16,597 | INFO     | cat /etc/os-release:
[2025-11-27 10:54:00] NAME="CentOS Linux"
[2025-11-27 10:54:00] VERSION="7 (Core)"
[2025-11-27 10:54:00] ID="centos"
[2025-11-27 10:54:00] ID_LIKE="rhel fedora"
[2025-11-27 10:54:00] VERSION_ID="7"
[2025-11-27 10:54:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:54:00] ANSI_COLOR="0;31"
[2025-11-27 10:54:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:54:00] HOME_URL="https://www.centos.org/"
[2025-11-27 10:54:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:54:00] 
[2025-11-27 10:54:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:54:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:54:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:54:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:54:00] 
[2025-11-27 10:54:00] 2025-11-27 15:53:16,598 | INFO     | ***************************************
[2025-11-27 10:54:00] 2025-11-27 15:53:17,101 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 10:54:00] 2025-11-27 15:53:17,123 | INFO     | sufficient remaining disk space (17489199104 B)
[2025-11-27 10:54:00] 2025-11-27 15:53:17,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:54:00] 2025-11-27 15:53:17,124 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:54:00] 2025-11-27 15:53:17,124 | INFO     | update_server=False
[2025-11-27 10:54:00] 2025-11-27 15:53:17,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:54:00] 2025-11-27 15:53:17,124 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:54:00] 2025-11-27 15:53:17,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:54:00] 2025-11-27 15:53:17,125 | INFO     | aborting loop
[2025-11-27 10:54:00] 2025-11-27 15:53:17,252 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:54:00] 2025-11-27 15:53:17,370 | INFO     | all payload control threads have been joined
[2025-11-27 10:54:00] 2025-11-27 15:53:17,690 | INFO     | all job control threads have been joined
[2025-11-27 10:54:00] 2025-11-27 15:53:18,073 | INFO     | all data control threads have been joined
[2025-11-27 10:54:00] 2025-11-27 15:53:18,130 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,130 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,131 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,152 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,205 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,261 | INFO     | [job] validate thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,376 | INFO     | [payload] control thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,695 | INFO     | [job] control thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,698 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:18,740 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:19,078 | INFO     | [data] control thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:19,153 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:19,176 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:19,258 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:20,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:54:00] 2025-11-27 15:53:24,155 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:54:00] 2025-11-27 15:53:47,637 | INFO     | PID=30728 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 10:54:00] 2025-11-27 15:53:47,637 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:54:00] 2025-11-27 15:53:47,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:54:00] 2025-11-27 15:53:47,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:54:00] 2025-11-27 15:53:54,598 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:54:00] 2025-11-27 15:53:55,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690127656768)>', '<ExcThread(monitor, started 139689155610368)>']
[2025-11-27 10:54:00] 2025-11-27 15:53:55,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:54:00] 2025-11-27 15:53:55,679 | INFO     | [monitor] control thread has ended
[2025-11-27 10:54:00] 2025-11-27 15:54:00,111 | INFO     | all workflow threads have been joined
[2025-11-27 10:54:00] 2025-11-27 15:54:00,111 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:54:00] 2025-11-27 15:54:00,112 | INFO     | traces error code: 0
[2025-11-27 10:54:00] 2025-11-27 15:54:00,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:54:00] 2025-11-27 15:54:00,229 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:54:00] 2025-11-27 15:54:00,233 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:54:00] 2025-11-27 15:54:00,238 [wrapper] pilotpid: 30728
[2025-11-27 10:54:00] 2025-11-27 15:54:00,243 [wrapper] Pilot exit status: 0
[2025-11-27 10:54:00] 2025-11-27 15:54:00,259 [wrapper] pandaids: 6897488212
[2025-11-27 10:54:00] 2025-11-27 15:54:00,311 [wrapper] cleanup supervisor_pilot 29026 30729
[2025-11-27 10:54:00] 2025-11-27 15:54:00,316 [wrapper] Test setup, not cleaning
[2025-11-27 10:54:00] 2025-11-27 15:54:00,321 [wrapper] apfmon messages muted
[2025-11-27 10:54:00] 2025-11-27 15:54:00,325 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:54:00] 2025-11-27 15:54:00,329 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:54:00]  *** Error codes and diagnostics ***
[2025-11-27 10:54:00]     "exeErrorCode": 0,
[2025-11-27 10:54:00]     "exeErrorDiag": "",
[2025-11-27 10:54:00]     "pilotErrorCode": 0,
[2025-11-27 10:54:00]     "pilotErrorDiag": "",
[2025-11-27 10:54:00]  *** Listing of results directory ***
[2025-11-27 10:54:00] total 1299236
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 10:54:00] -rwx------ 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas       100 Nov 26 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:54:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 23:55 run_atlas
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas       105 Nov 26 23:55 job.xml
[2025-11-27 10:54:00] -rw-r--r-- 2 boincer umatlas 407598242 Nov 26 23:55 EVNT.47483658._002264.pool.root.1
[2025-11-27 10:54:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 23:55 start_atlas.sh
[2025-11-27 10:54:00] drwxrwx--x 2 boincer umatlas      4096 Nov 26 23:55 shared
[2025-11-27 10:54:00] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 23:55 input.tar.gz
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas         0 Nov 26 23:55 boinc_lockfile
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 23:55 pandaJob.out
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas        57 Nov 26 23:55 setup.sh.local
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas    991570 Nov 26 23:55 agis_schedconf.cvmfs.json
[2025-11-27 10:54:00] drwx------ 5 boincer umatlas      4096 Nov 26 23:55 pilot3
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas       533 Nov 27 10:42 boinc_task_state.xml
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas      5912 Nov 27 10:46 init_data.xml
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas 904212392 Nov 27 10:52 HITS.47556161._002473.pool.root.1
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas        95 Nov 27 10:52 pilot_heartbeat.json
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas      1060 Nov 27 10:52 memory_monitor_summary.json
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas   1516240 Nov 27 10:53 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas   1903431 Nov 27 10:53 log.47556161._002473.job.log.tgz.1
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas      8675 Nov 27 10:53 heartbeat.json
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 10:53 boinc_mmap_file
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas        29 Nov 27 10:53 wrapper_checkpoint.txt
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas      4746 Nov 27 10:54 pilotlog.txt
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas   5440669 Nov 27 10:54 log.47556161._002473.job.log.1
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas       353 Nov 27 10:54 output.list
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas       620 Nov 27 10:54 runtime_log
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas   7362560 Nov 27 10:54 result.tar.gz
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 10:54 runtime_log.err
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas       668 Nov 27 10:54 jIjMDmMXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqXMKDmW16LHm.diag
[2025-11-27 10:54:00] -rw-r--r-- 1 boincer umatlas     21401 Nov 27 10:54 stderr.txt
[2025-11-27 10:54:00] HITS file was successfully produced:
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas 904212392 Nov 27 10:52 shared/HITS.pool.root.1
[2025-11-27 10:54:00]  *** Contents of shared directory: ***
[2025-11-27 10:54:00] total 1288860
[2025-11-27 10:54:00] -rw-r--r-- 2 boincer umatlas 407598242 Nov 26 23:55 ATLAS.root_0
[2025-11-27 10:54:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 23:55 start_atlas.sh
[2025-11-27 10:54:00] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 23:55 input.tar.gz
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas 904212392 Nov 27 10:52 HITS.pool.root.1
[2025-11-27 10:54:00] -rw------- 1 boincer umatlas   7362560 Nov 27 10:54 result.tar.gz
10:54:01 (27056): run_atlas exited; CPU time 303826.863445
10:54:01 (27056): called boinc_finish(0)

</stderr_txt>
]]>

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