Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:36:36 (3077008): wrapper (7.7.26015): starting
23:36:36 (3077008): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:36:36] Arguments: --nthreads 8
[2025-11-26 23:36:36] Threads: 8
[2025-11-26 23:36:36] Checking for CVMFS
[2025-11-26 23:36:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:36:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:36:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:36:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:36:38] 2.13.2.0 6122 36087 384520 153347 3 369 30613962 40960001 16497 16776704 0 75081798 99.609 80084384 39902 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 23:36:38] CVMFS is ok
[2025-11-26 23:36:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:36:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:36:38] Further information can be found at the LHC@home message board.
[2025-11-26 23:36:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:36:38] Checking for apptainer binary...
[2025-11-26 23:36:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:36:38] Running /usr/bin/apptainer --version
[2025-11-26 23:36:38] apptainer version 1.4.4-1.el9
[2025-11-26 23:36:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:36:39] c-210-35-2.aglt2.org
[2025-11-26 23:36:39] apptainer works
[2025-11-26 23:36:39] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:36:39] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:36:39] Starting ATLAS job with PandaID=6898120867
[2025-11-26 23:36:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:21:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:21:55] 2025-11-28 00:21:22,494 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:21:55] 2025-11-28 00:21:22,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:21:55] 2025-11-28 00:21:22,512 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:21:55] 2025-11-28 00:21:22,514 | INFO     | sum of square deviations: 486520548424.3477
[2025-11-27 19:21:55] 2025-11-28 00:21:22,537 | INFO     | sum of deviations: 4313180176051.2803
[2025-11-27 19:21:55] 2025-11-28 00:21:22,537 | INFO     | mean x: 1764253806.3820999
[2025-11-27 19:21:55] 2025-11-28 00:21:22,537 | INFO     | mean y: 2907624.359724613
[2025-11-27 19:21:55] 2025-11-28 00:21:22,537 | INFO     | intersect: -15637838830.964035
[2025-11-27 19:21:55] 2025-11-28 00:21:22,538 | INFO     | chi2: 11.386961066034994
[2025-11-27 19:21:55] 2025-11-28 00:21:22,540 | INFO     | sum of square deviations: 480267808953.83856
[2025-11-27 19:21:55] 2025-11-28 00:21:22,571 | INFO     | sum of deviations: 4640533530053.616
[2025-11-27 19:21:55] 2025-11-28 00:21:22,571 | INFO     | mean x: 1764253653.889369
[2025-11-27 19:21:55] 2025-11-28 00:21:22,571 | INFO     | mean y: 2915605.4969749353
[2025-11-27 19:21:55] 2025-11-28 00:21:22,571 | INFO     | intersect: -17043986318.300575
[2025-11-27 19:21:55] 2025-11-28 00:21:22,572 | INFO     | chi2: 9.093679510609766
[2025-11-27 19:21:55] 2025-11-28 00:21:22,573 | INFO     | current chi2=9.093679510609766 (change=20.139539795789972 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,573 | INFO     | right removable region: 1156
[2025-11-27 19:21:55] 2025-11-28 00:21:22,574 | INFO     | sum of square deviations: 480266545519.0598
[2025-11-27 19:21:55] 2025-11-28 00:21:22,596 | INFO     | sum of deviations: 3831343377894.8105
[2025-11-27 19:21:55] 2025-11-28 00:21:22,597 | INFO     | mean x: 1764253958.8902333
[2025-11-27 19:21:55] 2025-11-28 00:21:22,597 | INFO     | mean y: 2919372.9040622297
[2025-11-27 19:21:55] 2025-11-28 00:21:22,597 | INFO     | intersect: -14071479073.927881
[2025-11-27 19:21:55] 2025-11-28 00:21:22,598 | INFO     | chi2: 6.963620859593528
[2025-11-27 19:21:55] 2025-11-28 00:21:22,598 | INFO     | current chi2=6.963620859593528 (change=38.84566023181898 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,600 | INFO     | sum of square deviations: 474066357576.1172
[2025-11-27 19:21:55] 2025-11-28 00:21:22,622 | INFO     | sum of deviations: 3426365046102.721
[2025-11-27 19:21:55] 2025-11-28 00:21:22,622 | INFO     | mean x: 1764254111.3984375
[2025-11-27 19:21:55] 2025-11-28 00:21:22,622 | INFO     | mean y: 2929334.292534722
[2025-11-27 19:21:55] 2025-11-28 00:21:22,623 | INFO     | intersect: -12748404995.032928
[2025-11-27 19:21:55] 2025-11-28 00:21:22,624 | INFO     | chi2: 4.008913514156685
[2025-11-27 19:21:55] 2025-11-28 00:21:22,624 | INFO     | current chi2=4.008913514156685 (change=42.43061770610687 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,625 | INFO     | sum of square deviations: 467919892092.64166
[2025-11-27 19:21:55] 2025-11-28 00:21:22,647 | INFO     | sum of deviations: 3176191812075.552
[2025-11-27 19:21:55] 2025-11-28 00:21:22,648 | INFO     | mean x: 1764254263.9049695
[2025-11-27 19:21:55] 2025-11-28 00:21:22,648 | INFO     | mean y: 2935537.885789015
[2025-11-27 19:21:55] 2025-11-28 00:21:22,648 | INFO     | intersect: -11972639858.949244
[2025-11-27 19:21:55] 2025-11-28 00:21:22,649 | INFO     | chi2: 2.9446322552303363
[2025-11-27 19:21:55] 2025-11-28 00:21:22,649 | INFO     | current chi2=2.9446322552303363 (change=26.547872763232476 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,651 | INFO     | sum of square deviations: 461827266705.28625
[2025-11-27 19:21:55] 2025-11-28 00:21:22,673 | INFO     | sum of deviations: 3081448187935.4863
[2025-11-27 19:21:55] 2025-11-28 00:21:22,673 | INFO     | mean x: 1764254416.4054291
[2025-11-27 19:21:55] 2025-11-28 00:21:22,673 | INFO     | mean y: 2937908.985989492
[2025-11-27 19:21:55] 2025-11-28 00:21:22,673 | INFO     | intersect: -11768689637.55069
[2025-11-27 19:21:55] 2025-11-28 00:21:22,674 | INFO     | chi2: 2.8858238680265087
[2025-11-27 19:21:55] 2025-11-28 00:21:22,675 | INFO     | current chi2=2.8858238680265087 (change=1.9971385934311685 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,675 | INFO     | left removable region: 40
[2025-11-27 19:21:55] 2025-11-28 00:21:22,676 | INFO     | sum of square deviations: 430997795323.494
[2025-11-27 19:21:55] 2025-11-28 00:21:22,697 | INFO     | sum of deviations: 3167914103188.1074
[2025-11-27 19:21:55] 2025-11-28 00:21:22,698 | INFO     | mean x: 1764254843.407706
[2025-11-27 19:21:55] 2025-11-28 00:21:22,698 | INFO     | mean y: 2953434.685483871
[2025-11-27 19:21:55] 2025-11-28 00:21:22,698 | INFO     | intersect: -12964648396.906849
[2025-11-27 19:21:55] 2025-11-28 00:21:22,699 | INFO     | chi2: 0.43298971712056894
[2025-11-27 19:21:55] 2025-11-28 00:21:22,699 | INFO     | current memory leak: 7.35 B/s (using 1116 data points, chi2=0.43)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,700 | INFO     | could have reported an average CPU frequency of 2827 MHz (42 samples)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,700 | INFO     | ..............................
[2025-11-27 19:21:55] 2025-11-28 00:21:22,700 | INFO     | . Timing measurements:
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | . get job = 0 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | . initial setup = 6 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | . payload setup = 40 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | . stage-in = 0 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | . payload execution = 70898 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | . stage-out = 3 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | . log creation = 1 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,701 | INFO     | ..............................
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | 
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | job summary report
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | --------------------------------------------------
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | PanDA job id: 6898120867
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | task id: 47556161
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | errors: (none)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | pilot state: finished 
[2025-11-27 19:21:55] 2025-11-28 00:21:22,787 | INFO     | transexitcode: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | exeerrorcode: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | exeerrordiag: 
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | exitcode: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | exitmsg: OK
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | cpuconsumptiontime: 242210 s
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | nevents: 1000
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | neventsw: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | pid: 3091076
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | pgrp: 3091076
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | corecount: 8
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | event service: False
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284292, 12: 2284320, 23: 2284348, 29: 2284638, 34: 2284794, 70942: 2344077, 70947: 2353127, 70957: 2353317}
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | --------------------------------------------------
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | 
[2025-11-27 19:21:55] 2025-11-28 00:21:22,788 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 19:21:55] 2025-11-28 00:21:22,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,841 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,841 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,841 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,842 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,842 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | job 6898120867 has completed (purged errors)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,855 | INFO     | overall cleanup function is called
[2025-11-27 19:21:55] 2025-11-28 00:21:23,879 | INFO     | --- collectZombieJob: --- 10, [3091076]
[2025-11-27 19:21:55] 2025-11-28 00:21:23,879 | INFO     | zombie collector waiting for pid 3091076
[2025-11-27 19:21:55] 2025-11-28 00:21:23,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:21:55] 2025-11-28 00:21:23,879 | INFO     | collected zombie processes
[2025-11-27 19:21:55] 2025-11-28 00:21:23,879 | INFO     | will attempt to kill all subprocesses of pid=3091076
[2025-11-27 19:21:55] 2025-11-28 00:21:24,274 | INFO     | process IDs to be killed: [3091076] (in reverse order)
[2025-11-27 19:21:55] 2025-11-28 00:21:24,361 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:21:55] 2025-11-28 00:21:24,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:21:55] 2025-11-28 00:21:24,371 | INFO     | did not find any defunct processes belonging to 3091076
[2025-11-27 19:21:55] 2025-11-28 00:21:24,380 | INFO     | did not find any defunct processes belonging to 3091076
[2025-11-27 19:21:55] 2025-11-28 00:21:24,382 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:21:55] 2025-11-28 00:21:24,382 | INFO     | ready for new job
[2025-11-27 19:21:55] 2025-11-28 00:21:24,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:21:55] 2025-11-28 00:21:24,387 | INFO     | ***************************************
[2025-11-27 19:21:55] 2025-11-28 00:21:24,387 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:21:55] 2025-11-28 00:21:24,387 | INFO     | ***************************************
[2025-11-27 19:21:55] 2025-11-28 00:21:24,387 | INFO     | 
[2025-11-27 19:21:55] 2025-11-28 00:21:24,390 | INFO     | architecture information:
[2025-11-27 19:21:55] 2025-11-28 00:21:24,391 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:21:55] 2025-11-28 00:21:24,416 | INFO     | cat /etc/os-release:
[2025-11-27 19:21:55] NAME="CentOS Linux"
[2025-11-27 19:21:55] VERSION="7 (Core)"
[2025-11-27 19:21:55] ID="centos"
[2025-11-27 19:21:55] ID_LIKE="rhel fedora"
[2025-11-27 19:21:55] VERSION_ID="7"
[2025-11-27 19:21:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:21:55] ANSI_COLOR="0;31"
[2025-11-27 19:21:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:21:55] HOME_URL="https://www.centos.org/"
[2025-11-27 19:21:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:21:55] 
[2025-11-27 19:21:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:21:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:21:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:21:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:21:55] 
[2025-11-27 19:21:55] 2025-11-28 00:21:24,417 | INFO     | ***************************************
[2025-11-27 19:21:55] 2025-11-28 00:21:24,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 19:21:55] 2025-11-28 00:21:24,950 | INFO     | sufficient remaining disk space (71801241600 B)
[2025-11-27 19:21:55] 2025-11-28 00:21:24,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:21:55] 2025-11-28 00:21:24,951 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:21:55] 2025-11-28 00:21:24,951 | INFO     | update_server=False
[2025-11-27 19:21:55] 2025-11-28 00:21:24,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:21:55] 2025-11-28 00:21:25,225 | INFO     | all payload control threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:25,397 | INFO     | all data control threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:25,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:25,686 | INFO     | aborting loop
[2025-11-27 19:21:55] 2025-11-28 00:21:25,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:25,958 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:26,034 | INFO     | [job] validate thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:26,072 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:26,231 | INFO     | [payload] control thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:26,246 | INFO     | all job control threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:26,402 | INFO     | [data] control thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:26,561 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:26,692 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:26,754 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:27,071 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:27,072 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:27,252 | INFO     | [job] control thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:27,293 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:27,312 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:27,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:27,874 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:28,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:28,808 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:32,407 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:46,708 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:21:55] 2025-11-28 00:21:47,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127856424768)>', '<ExcThread(monitor, started 140127510710016)>']
[2025-11-27 19:21:55] 2025-11-28 00:21:52,728 | INFO     | all workflow threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:52,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:21:55] 2025-11-28 00:21:52,742 | INFO     | traces error code: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:52,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:21:55] 2025-11-28 00:21:55,545 | INFO     | PID=3082269 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:21:55] 2025-11-28 00:21:55,545 | INFO     | .. there are 17 such processes running
[2025-11-27 19:21:55] 2025-11-28 00:21:55,545 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:21:55] 2025-11-28 00:21:55,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:21:55] 2025-11-28 00:21:55,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:21:55] 2025-11-28 00:21:55,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:21:55] 2025-11-28 00:21:55,545 | INFO     | [monitor] control thread has ended
[2025-11-27 19:21:55] 2025-11-28 00:21:55,697 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:21:55] 2025-11-28 00:21:55,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:21:55] 2025-11-28 00:21:55,702 [wrapper] pilotpid: 3082269
[2025-11-27 19:21:55] 2025-11-28 00:21:55,704 [wrapper] Pilot exit status: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:55,737 [wrapper] pandaids: 6898120867
[2025-11-27 19:21:55] 2025-11-28 00:21:55,803 [wrapper] cleanup supervisor_pilot 1238335 3082270
[2025-11-27 19:21:55] 2025-11-28 00:21:55,805 [wrapper] Test setup, not cleaning
[2025-11-27 19:21:55] 2025-11-28 00:21:55,808 [wrapper] apfmon messages muted
[2025-11-27 19:21:55] 2025-11-28 00:21:55,811 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:21:55] 2025-11-28 00:21:55,814 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:21:55]  *** Error codes and diagnostics ***
[2025-11-27 19:21:55]     "exeErrorCode": 0,
[2025-11-27 19:21:55]     "exeErrorDiag": "",
[2025-11-27 19:21:55]     "pilotErrorCode": 0,
[2025-11-27 19:21:55]     "pilotErrorDiag": "",
[2025-11-27 19:21:55]  *** Listing of results directory ***
[2025-11-27 19:21:55] total 1323124
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-27 19:21:55] -rwx------. 1 boincer umatlas     36292 Nov 25 22:50 runpilot2-wrapper.sh
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       100 Nov 26 23:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:21:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 23:36 run_atlas
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       105 Nov 26 23:36 job.xml
[2025-11-27 19:21:55] -rw-r--r--. 2 boincer umatlas 407843680 Nov 26 23:36 EVNT.47483658._002449.pool.root.1
[2025-11-27 19:21:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:36 start_atlas.sh
[2025-11-27 19:21:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 23:36 shared
[2025-11-27 19:21:55] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 23:36 input.tar.gz
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas         0 Nov 26 23:36 boinc_lockfile
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 23:36 pandaJob.out
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas        57 Nov 26 23:36 setup.sh.local
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas    991570 Nov 26 23:37 agis_schedconf.cvmfs.json
[2025-11-27 19:21:55] drwx------. 5 boincer umatlas      4096 Nov 26 23:37 pilot3
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:10 boinc_task_state.xml
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 19:18 init_data.xml
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas 919670105 Nov 27 19:20 HITS.47556161._004312.pool.root.1
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas      1059 Nov 27 19:21 memory_monitor_summary.json
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas        95 Nov 27 19:21 pilot_heartbeat.json
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas   2293324 Nov 27 19:21 log.47556161._004312.job.log.tgz.1
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas      8623 Nov 27 19:21 heartbeat.json
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:21 boinc_mmap_file
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:21 wrapper_checkpoint.txt
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas       823 Nov 27 19:21 pilotlog.txt
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas   9438070 Nov 27 19:21 log.47556161._004312.job.log.1
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas       353 Nov 27 19:21 output.list
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:21 runtime_log
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas  11755520 Nov 27 19:21 result.tar.gz
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas       662 Nov 27 19:21 xi1NDmniLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFsMKDmC1rnun.diag
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 19:21 runtime_log.err
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      2251 Nov 27 19:21 stderr.txt
[2025-11-27 19:21:56] HITS file was successfully produced:
[2025-11-27 19:21:56] -rw-------. 1 boincer umatlas 919670105 Nov 27 19:20 shared/HITS.pool.root.1
[2025-11-27 19:21:56]  *** Contents of shared directory: ***
[2025-11-27 19:21:56] total 1308488
[2025-11-27 19:21:56] -rw-r--r--. 2 boincer umatlas 407843680 Nov 26 23:36 ATLAS.root_0
[2025-11-27 19:21:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:36 start_atlas.sh
[2025-11-27 19:21:56] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 23:36 input.tar.gz
[2025-11-27 19:21:56] -rw-------. 1 boincer umatlas 919670105 Nov 27 19:20 HITS.pool.root.1
[2025-11-27 19:21:56] -rw-------. 1 boincer umatlas  11755520 Nov 27 19:21 result.tar.gz
19:21:57 (3077008): run_atlas exited; CPU time 243657.312848
19:21:57 (3077008): called boinc_finish(0)

</stderr_txt>
]]>

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