Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:53 (1042364): wrapper (7.7.26015): starting
00:03:53 (1042364): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:03:53] Arguments: --nthreads 8
[2025-11-27 00:03:53] Threads: 8
[2025-11-27 00:03:53] Checking for CVMFS
[2025-11-27 00:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:55] 2.13.3.0 10223 31023 243436 153347 2 755 38921305 40960001 62174 16776704 0 406127555 99.764 252059037 50664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:55] CVMFS is ok
[2025-11-27 00:03:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:55] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:55] Checking for apptainer binary...
[2025-11-27 00:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:55] Running /usr/bin/apptainer --version
[2025-11-27 00:03:55] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:56] c8-7-6.aglt2.org
[2025-11-27 00:03:56] apptainer works
[2025-11-27 00:03:56] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:03:56] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:03:56] Starting ATLAS job with PandaID=6897487282
[2025-11-27 00:03:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:01:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:01:30] 2025-11-27 12:00:25,246 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.980898437499
[2025-11-27 07:01:30] 2025-11-27 12:00:25,257 | INFO     | using path: /tmp/boinchome/slots/13/PanDA_Pilot-6897487282/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,257 | INFO     | extracted standard info from prmon json
[2025-11-27 07:01:30] 2025-11-27 12:00:25,257 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:01:30] 2025-11-27 12:00:25,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:01:30] 2025-11-27 12:00:25,262 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:01:30] 2025-11-27 12:00:25,262 | INFO     | sum of square deviations: 20750631618.41386
[2025-11-27 07:01:30] 2025-11-27 12:00:25,264 | INFO     | sum of deviations: 297455445145.2411
[2025-11-27 07:01:30] 2025-11-27 12:00:25,264 | INFO     | mean x: 1764232409.5517242
[2025-11-27 07:01:30] 2025-11-27 12:00:25,264 | INFO     | mean y: 2817285.726600985
[2025-11-27 07:01:30] 2025-11-27 12:00:25,264 | INFO     | intersect: -25287041180.903664
[2025-11-27 07:01:30] 2025-11-27 12:00:25,264 | INFO     | chi2: 6.719347111607328
[2025-11-27 07:01:30] 2025-11-27 12:00:25,265 | INFO     | sum of square deviations: 19993720848.768166
[2025-11-27 07:01:30] 2025-11-27 12:00:25,267 | INFO     | sum of deviations: 421808284593.33936
[2025-11-27 07:01:30] 2025-11-27 12:00:25,267 | INFO     | mean x: 1764232257.0897756
[2025-11-27 07:01:30] 2025-11-27 12:00:25,267 | INFO     | mean y: 2842310.5461346633
[2025-11-27 07:01:30] 2025-11-27 12:00:25,267 | INFO     | intersect: -37217232312.68851
[2025-11-27 07:01:30] 2025-11-27 12:00:25,268 | INFO     | chi2: 3.7864770332791733
[2025-11-27 07:01:30] 2025-11-27 12:00:25,268 | INFO     | current chi2=3.7864770332791733 (change=43.64814065434678 %)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,268 | INFO     | sum of square deviations: 19255291242.11101
[2025-11-27 07:01:30] 2025-11-27 12:00:25,270 | INFO     | sum of deviations: 442858609958.5552
[2025-11-27 07:01:30] 2025-11-27 12:00:25,270 | INFO     | mean x: 1764232104.6111112
[2025-11-27 07:01:30] 2025-11-27 12:00:25,270 | INFO     | mean y: 2846616.6464646463
[2025-11-27 07:01:30] 2025-11-27 12:00:25,270 | INFO     | intersect: -40573292568.59893
[2025-11-27 07:01:30] 2025-11-27 12:00:25,270 | INFO     | chi2: 3.488944801394947
[2025-11-27 07:01:30] 2025-11-27 12:00:25,270 | INFO     | current chi2=3.488944801394947 (change=7.857758789218296 %)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,270 | INFO     | right removable region: 395
[2025-11-27 07:01:30] 2025-11-27 12:00:25,271 | INFO     | sum of square deviations: 19992965058.76817
[2025-11-27 07:01:30] 2025-11-27 12:00:25,273 | INFO     | sum of deviations: 157405166678.3464
[2025-11-27 07:01:30] 2025-11-27 12:00:25,273 | INFO     | mean x: 1764232562.0897756
[2025-11-27 07:01:30] 2025-11-27 12:00:25,273 | INFO     | mean y: 2845448.9625935163
[2025-11-27 07:01:30] 2025-11-27 12:00:25,273 | INFO     | intersect: -13887006290.328007
[2025-11-27 07:01:30] 2025-11-27 12:00:25,273 | INFO     | chi2: 3.456339167681903
[2025-11-27 07:01:30] 2025-11-27 12:00:25,273 | INFO     | current chi2=3.456339167681903 (change=48.561383862559296 %)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,273 | INFO     | sum of square deviations: 19254072217.65656
[2025-11-27 07:01:30] 2025-11-27 12:00:25,275 | INFO     | sum of deviations: 128938936975.82822
[2025-11-27 07:01:30] 2025-11-27 12:00:25,275 | INFO     | mean x: 1764232714.6161616
[2025-11-27 07:01:30] 2025-11-27 12:00:25,275 | INFO     | mean y: 2851317.3080808083
[2025-11-27 07:01:30] 2025-11-27 12:00:25,275 | INFO     | intersect: -11811703454.74597
[2025-11-27 07:01:30] 2025-11-27 12:00:25,276 | INFO     | chi2: 3.3770167209622994
[2025-11-27 07:01:30] 2025-11-27 12:00:25,276 | INFO     | current chi2=3.3770167209622994 (change=2.2949844581602044 %)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,276 | INFO     | left removable region: 20
[2025-11-27 07:01:30] 2025-11-27 12:00:25,276 | INFO     | sum of square deviations: 16351127519.02932
[2025-11-27 07:01:30] 2025-11-27 12:00:25,278 | INFO     | sum of deviations: 233979749683.00534
[2025-11-27 07:01:30] 2025-11-27 12:00:25,278 | INFO     | mean x: 1764232684.1546667
[2025-11-27 07:01:30] 2025-11-27 12:00:25,278 | INFO     | mean y: 2890884.4826666666
[2025-11-27 07:01:30] 2025-11-27 12:00:25,278 | INFO     | intersect: -25242751738.062973
[2025-11-27 07:01:30] 2025-11-27 12:00:25,278 | INFO     | chi2: 0.042664948545637314
[2025-11-27 07:01:30] 2025-11-27 12:00:25,278 | INFO     | current memory leak: 14.31 B/s (using 375 data points, chi2=0.04)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | could have reported an average CPU frequency of 3768 MHz (17 samples)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | ..............................
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . Timing measurements:
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . get job = 0 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . initial setup = 2 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . payload setup = 48 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . stage-in = 0 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . payload execution = 24787 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . stage-out = 3 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | . log creation = 0 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,279 | INFO     | ..............................
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | 
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | job summary report
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | --------------------------------------------------
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | PanDA job id: 6897487282
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | task id: 47556161
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | errors: (none)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | pilot state: finished 
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | transexitcode: 0
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | exeerrorcode: 0
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | exeerrordiag: 
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | exitcode: 0
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | exitmsg: OK
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | cpuconsumptiontime: 134365 s
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | nevents: 1000
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | neventsw: 0
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | pid: 1094700
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | pgrp: 1094700
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | corecount: 8
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | event service: False
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | sizes: {0: 2284095, 1: 2284294, 11: 2284294, 22: 2284322, 31: 2284612, 33: 2284640, 24839: 2320951, 24840: 2320950, 24844: 2330002, 24845: 2330058, 24858: 2330368}
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | --------------------------------------------------
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | 
[2025-11-27 07:01:30] 2025-11-27 12:00:25,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/13
[2025-11-27 07:01:30] 2025-11-27 12:00:25,340 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | job 6897487282 has completed (purged errors)
[2025-11-27 07:01:30] 2025-11-27 12:00:25,341 | INFO     | overall cleanup function is called
[2025-11-27 07:01:30] 2025-11-27 12:00:26,363 | INFO     | --- collectZombieJob: --- 10, [1094700]
[2025-11-27 07:01:30] 2025-11-27 12:00:26,363 | INFO     | zombie collector waiting for pid 1094700
[2025-11-27 07:01:30] 2025-11-27 12:00:26,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:01:30] 2025-11-27 12:00:26,363 | INFO     | collected zombie processes
[2025-11-27 07:01:30] 2025-11-27 12:00:26,363 | INFO     | will attempt to kill all subprocesses of pid=1094700
[2025-11-27 07:01:30] 2025-11-27 12:00:27,327 | INFO     | process IDs to be killed: [1094700] (in reverse order)
[2025-11-27 07:01:30] 2025-11-27 12:00:27,659 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:01:30] 2025-11-27 12:00:27,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:01:30] 2025-11-27 12:00:27,689 | INFO     | did not find any defunct processes belonging to 1094700
[2025-11-27 07:01:30] 2025-11-27 12:00:27,717 | INFO     | did not find any defunct processes belonging to 1094700
[2025-11-27 07:01:30] 2025-11-27 12:00:27,718 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:01:30] 2025-11-27 12:00:27,718 | INFO     | ready for new job
[2025-11-27 07:01:30] 2025-11-27 12:00:27,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:01:30] 2025-11-27 12:00:27,720 | INFO     | ***************************************
[2025-11-27 07:01:30] 2025-11-27 12:00:27,720 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:01:30] 2025-11-27 12:00:27,720 | INFO     | ***************************************
[2025-11-27 07:01:30] 2025-11-27 12:00:27,720 | INFO     | 
[2025-11-27 07:01:30] 2025-11-27 12:00:27,724 | INFO     | architecture information:
[2025-11-27 07:01:30] 2025-11-27 12:00:27,725 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:01:30] 2025-11-27 12:00:27,777 | INFO     | cat /etc/os-release:
[2025-11-27 07:01:30] NAME="CentOS Linux"
[2025-11-27 07:01:30] VERSION="7 (Core)"
[2025-11-27 07:01:30] ID="centos"
[2025-11-27 07:01:30] ID_LIKE="rhel fedora"
[2025-11-27 07:01:30] VERSION_ID="7"
[2025-11-27 07:01:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:01:30] ANSI_COLOR="0;31"
[2025-11-27 07:01:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:01:30] HOME_URL="https://www.centos.org/"
[2025-11-27 07:01:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:01:30] 
[2025-11-27 07:01:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:01:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:01:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:01:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:01:30] 
[2025-11-27 07:01:30] 2025-11-27 12:00:27,777 | INFO     | ***************************************
[2025-11-27 07:01:30] 2025-11-27 12:00:28,280 | INFO     | executing command: df -mP /tmp/boinchome/slots/13
[2025-11-27 07:01:30] 2025-11-27 12:00:28,318 | INFO     | sufficient remaining disk space (159902597120 B)
[2025-11-27 07:01:30] 2025-11-27 12:00:28,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:01:30] 2025-11-27 12:00:28,318 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:01:30] 2025-11-27 12:00:28,318 | INFO     | update_server=False
[2025-11-27 07:01:30] 2025-11-27 12:00:28,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:01:30] 2025-11-27 12:00:28,433 | INFO     | all data control threads have been joined
[2025-11-27 07:01:30] 2025-11-27 12:00:28,438 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 07:01:30] 2025-11-27 12:00:28,439 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 07:01:30] 2025-11-27 12:00:28,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:30] 2025-11-27 12:00:28,439 | INFO     | will abort loop
[2025-11-27 07:01:30] 2025-11-27 12:00:28,809 | INFO     | all job control threads have been joined
[2025-11-27 07:01:30] 2025-11-27 12:00:28,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:01:30] 2025-11-27 12:00:29,324 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:29,439 | INFO     | [data] control thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:29,445 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:29,754 | INFO     | all payload control threads have been joined
[2025-11-27 07:01:30] 2025-11-27 12:00:29,815 | INFO     | [job] control thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:29,872 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:29,984 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:29,991 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:30,012 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:30,052 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:30,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:30] 2025-11-27 12:00:30,400 | INFO     | [job] validate thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:30,602 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:30,759 | INFO     | [payload] control thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:30,957 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:31,345 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:31,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:01:30] 2025-11-27 12:00:35,569 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:39,351 | INFO     | job.realtimelogging is not enabled
[2025-11-27 07:01:30] 2025-11-27 12:00:40,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:01:30] 2025-11-27 12:00:41,971 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:01:30] 2025-11-27 12:00:42,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140193085380416)>', '<ExcThread(monitor, started 140192723740416)>']
[2025-11-27 07:01:30] 2025-11-27 12:00:47,401 | INFO     | all workflow threads have been joined
[2025-11-27 07:01:30] 2025-11-27 12:00:47,401 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:01:30] 2025-11-27 12:00:47,401 | INFO     | traces error code: 0
[2025-11-27 07:01:30] 2025-11-27 12:00:47,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:01:30] 2025-11-27 12:00:58,374 | INFO     | PID=1058874 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:01:30] 2025-11-27 12:00:58,374 | INFO     | .. there are 65 such processes running
[2025-11-27 07:01:30] 2025-11-27 12:00:58,374 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:01:30] 2025-11-27 12:00:58,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:01:30] 2025-11-27 12:00:58,374 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:01:30] 2025-11-27 12:00:58,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:01:30] 2025-11-27 12:00:58,375 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 07:01:30] 2025-11-27 12:00:58,375 | INFO     | [monitor] control thread has ended
[2025-11-27 07:01:30] 2025-11-27 12:00:58,529 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:01:30] 2025-11-27 12:00:58,538 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:01:30] 2025-11-27 12:00:58,566 [wrapper] pilotpid: 1058874
[2025-11-27 07:01:30] 2025-11-27 12:00:58,573 [wrapper] Pilot exit status: 0
[2025-11-27 07:01:30] 2025-11-27 12:00:58,591 [wrapper] pandaids: 6897487282
[2025-11-27 07:01:30] 2025-11-27 12:00:58,774 [wrapper] cleanup supervisor_pilot 3881271 1058875
[2025-11-27 07:01:30] 2025-11-27 12:00:58,782 [wrapper] Test setup, not cleaning
[2025-11-27 07:01:30] 2025-11-27 12:00:58,789 [wrapper] apfmon messages muted
[2025-11-27 07:01:30] 2025-11-27 12:00:58,794 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:01:30] 2025-11-27 12:00:58,797 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:01:30]  *** Error codes and diagnostics ***
[2025-11-27 07:01:30]     "exeErrorCode": 0,
[2025-11-27 07:01:30]     "exeErrorDiag": "",
[2025-11-27 07:01:30]     "pilotErrorCode": 0,
[2025-11-27 07:01:30]     "pilotErrorDiag": "",
[2025-11-27 07:01:30]  *** Listing of results directory ***
[2025-11-27 07:01:30] total 1296548
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 07:01:30] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:01:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 07:01:30] -rw-r--r--. 2 boincer umatlas 410186763 Nov 27 00:03 EVNT.47483658._002250.pool.root.1
[2025-11-27 07:01:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 07:01:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 07:01:30] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:03 input.tar.gz
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 00:03 pandaJob.out
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas    991570 Nov 27 00:04 agis_schedconf.cvmfs.json
[2025-11-27 07:01:30] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas       532 Nov 27 06:52 boinc_task_state.xml
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 06:57 init_data.xml
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas 903813309 Nov 27 06:59 HITS.47556161._002337.pool.root.1
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas      1058 Nov 27 07:00 memory_monitor_summary.json
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas   1686141 Nov 27 07:00 log.47556161._002337.job.log.tgz.1
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas      8596 Nov 27 07:00 heartbeat.json
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas       893 Nov 27 07:00 pilotlog.txt
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas        95 Nov 27 07:00 pilot_heartbeat.json
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas   3185844 Nov 27 07:00 log.47556161._002337.job.log.1
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas       353 Nov 27 07:00 output.list
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:00 runtime_log
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas   4894720 Nov 27 07:00 result.tar.gz
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas      9351 Nov 27 07:00 runtime_log.err
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas       660 Nov 27 07:00 87EMDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsbJKDmiZ7AAn.diag
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:01 boinc_mmap_file
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:01 wrapper_checkpoint.txt
[2025-11-27 07:01:30] -rw-r--r--. 1 boincer umatlas     21277 Nov 27 07:01 stderr.txt
[2025-11-27 07:01:30] HITS file was successfully produced:
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas 903813309 Nov 27 06:59 shared/HITS.pool.root.1
[2025-11-27 07:01:30]  *** Contents of shared directory: ***
[2025-11-27 07:01:30] total 1288592
[2025-11-27 07:01:30] -rw-r--r--. 2 boincer umatlas 410186763 Nov 27 00:03 ATLAS.root_0
[2025-11-27 07:01:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 07:01:30] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:03 input.tar.gz
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas 903813309 Nov 27 06:59 HITS.pool.root.1
[2025-11-27 07:01:30] -rw-------. 1 boincer umatlas   4894720 Nov 27 07:00 result.tar.gz
07:01:32 (1042364): run_atlas exited; CPU time 134719.494560
07:01:32 (1042364): called boinc_finish(0)

</stderr_txt>
]]>

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