Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:23 (3790629): wrapper (7.7.26015): starting
00:03:23 (3790629): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:03:23] Arguments: --nthreads 8
[2025-11-27 00:03:23] Threads: 8
[2025-11-27 00:03:23] Checking for CVMFS
[2025-11-27 00:03:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:25] 2.13.2.0 14352 35362 225656 153347 1 518 35917230 40960001 25849 16776704 0 275864408 99.679 222611868 48624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:03:25] CVMFS is ok
[2025-11-27 00:03:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:25] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:25] Checking for apptainer binary...
[2025-11-27 00:03:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:25] Running /usr/bin/apptainer --version
[2025-11-27 00:03:26] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:27] c-208-36.aglt2.org
[2025-11-27 00:03:27] apptainer works
[2025-11-27 00:03:27] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:03:27] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:03:27] Starting ATLAS job with PandaID=6898175052
[2025-11-27 00:03:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:16:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:16:09] 2025-11-27 14:15:18,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:16:09] 2025-11-27 14:15:18,017 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:16:09] 2025-11-27 14:15:18,017 | INFO     | sum of square deviations: 48286321737.717476
[2025-11-27 09:16:09] 2025-11-27 14:15:18,021 | INFO     | sum of deviations: 857193397193.6958
[2025-11-27 09:16:09] 2025-11-27 14:15:18,021 | INFO     | mean x: 1764236510.9107807
[2025-11-27 09:16:09] 2025-11-27 14:15:18,021 | INFO     | mean y: 2842929.0353159853
[2025-11-27 09:16:09] 2025-11-27 14:15:18,021 | INFO     | intersect: -31316417553.369194
[2025-11-27 09:16:09] 2025-11-27 14:15:18,022 | INFO     | chi2: 12.527376308665916
[2025-11-27 09:16:09] 2025-11-27 14:15:18,022 | INFO     | sum of square deviations: 46952751470.17313
[2025-11-27 09:16:09] 2025-11-27 14:15:18,026 | INFO     | sum of deviations: 1033564132499.442
[2025-11-27 09:16:09] 2025-11-27 14:15:18,026 | INFO     | mean x: 1764236358.424015
[2025-11-27 09:16:09] 2025-11-27 14:15:18,026 | INFO     | mean y: 2863080.8874296434
[2025-11-27 09:16:09] 2025-11-27 14:15:18,026 | INFO     | intersect: -38833016909.59289
[2025-11-27 09:16:09] 2025-11-27 14:15:18,026 | INFO     | chi2: 9.388101238565577
[2025-11-27 09:16:09] 2025-11-27 14:15:18,026 | INFO     | current chi2=9.388101238565577 (change=25.05931803077329 %)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,026 | INFO     | sum of square deviations: 45643907220.680145
[2025-11-27 09:16:09] 2025-11-27 14:15:18,030 | INFO     | sum of deviations: 1030512332688.8177
[2025-11-27 09:16:09] 2025-11-27 14:15:18,030 | INFO     | mean x: 1764236205.933712
[2025-11-27 09:16:09] 2025-11-27 14:15:18,030 | INFO     | mean y: 2862714.909090909
[2025-11-27 09:16:09] 2025-11-27 14:15:18,030 | INFO     | intersect: -39828678419.393654
[2025-11-27 09:16:09] 2025-11-27 14:15:18,030 | INFO     | chi2: 9.319848767296245
[2025-11-27 09:16:09] 2025-11-27 14:15:18,031 | INFO     | current chi2=9.319848767296245 (change=0.727010388308942 %)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,031 | INFO     | right removable region: 527
[2025-11-27 09:16:09] 2025-11-27 14:15:18,031 | INFO     | sum of square deviations: 46952288480.17313
[2025-11-27 09:16:09] 2025-11-27 14:15:18,035 | INFO     | sum of deviations: 637079763479.0468
[2025-11-27 09:16:09] 2025-11-27 14:15:18,035 | INFO     | mean x: 1764236663.424015
[2025-11-27 09:16:09] 2025-11-27 14:15:18,035 | INFO     | mean y: 2868086.1369606005
[2025-11-27 09:16:09] 2025-11-27 14:15:18,035 | INFO     | intersect: -23935464051.38721
[2025-11-27 09:16:09] 2025-11-27 14:15:18,035 | INFO     | chi2: 7.84286033941941
[2025-11-27 09:16:09] 2025-11-27 14:15:18,035 | INFO     | current chi2=7.84286033941941 (change=37.39423047430893 %)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,036 | INFO     | sum of square deviations: 45643046384.9375
[2025-11-27 09:16:09] 2025-11-27 14:15:18,039 | INFO     | sum of deviations: 442694618122.9376
[2025-11-27 09:16:09] 2025-11-27 14:15:18,039 | INFO     | mean x: 1764236815.9375
[2025-11-27 09:16:09] 2025-11-27 14:15:18,039 | INFO     | mean y: 2890733.664772727
[2025-11-27 09:16:09] 2025-11-27 14:15:18,039 | INFO     | intersect: -17108546941.267021
[2025-11-27 09:16:09] 2025-11-27 14:15:18,040 | INFO     | chi2: 4.405616841825142
[2025-11-27 09:16:09] 2025-11-27 14:15:18,040 | INFO     | current chi2=4.405616841825142 (change=43.82640196100597 %)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,040 | INFO     | sum of square deviations: 44358459153.19702
[2025-11-27 09:16:09] 2025-11-27 14:15:18,044 | INFO     | sum of deviations: 353098910079.2352
[2025-11-27 09:16:09] 2025-11-27 14:15:18,044 | INFO     | mean x: 1764236968.4455068
[2025-11-27 09:16:09] 2025-11-27 14:15:18,044 | INFO     | mean y: 2901342.37667304
[2025-11-27 09:16:09] 2025-11-27 14:15:18,044 | INFO     | intersect: -14040646665.640757
[2025-11-27 09:16:09] 2025-11-27 14:15:18,044 | INFO     | chi2: 3.5722186575530364
[2025-11-27 09:16:09] 2025-11-27 14:15:18,044 | INFO     | current chi2=3.5722186575530364 (change=18.916719592138858 %)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,044 | INFO     | left removable region: 30
[2025-11-27 09:16:09] 2025-11-27 14:15:18,045 | INFO     | sum of square deviations: 38067642917.70958
[2025-11-27 09:16:09] 2025-11-27 14:15:18,048 | INFO     | sum of deviations: 437526359992.6759
[2025-11-27 09:16:09] 2025-11-27 14:15:18,048 | INFO     | mean x: 1764237090.4044266
[2025-11-27 09:16:09] 2025-11-27 14:15:18,048 | INFO     | mean y: 2934348.056338028
[2025-11-27 09:16:09] 2025-11-27 14:15:18,048 | INFO     | intersect: -20274134920.385807
[2025-11-27 09:16:09] 2025-11-27 14:15:18,048 | INFO     | chi2: 0.1119656107566102
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | current memory leak: 11.49 B/s (using 497 data points, chi2=0.11)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | could have reported an average CPU frequency of 3782 MHz (21 samples)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | ..............................
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | . Timing measurements:
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | . get job = 0 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | . initial setup = 5 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | . payload setup = 91 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | . stage-in = 0 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,049 | INFO     | . payload execution = 32814 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,050 | INFO     | . stage-out = 3 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,050 | INFO     | . log creation = 0 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,050 | INFO     | ..............................
[2025-11-27 09:16:09] 2025-11-27 14:15:18,100 | INFO     | 
[2025-11-27 09:16:09] 2025-11-27 14:15:18,100 | INFO     | job summary report
[2025-11-27 09:16:09] 2025-11-27 14:15:18,100 | INFO     | --------------------------------------------------
[2025-11-27 09:16:09] 2025-11-27 14:15:18,100 | INFO     | PanDA job id: 6898175052
[2025-11-27 09:16:09] 2025-11-27 14:15:18,100 | INFO     | task id: 47556161
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | errors: (none)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | pilot state: finished 
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | transexitcode: 0
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | exeerrorcode: 0
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | exeerrordiag: 
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | exitcode: 0
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | exitmsg: OK
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | cpuconsumptiontime: 139115 s
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | nevents: 1000
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | neventsw: 0
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | pid: 3908831
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | pgrp: 3908831
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | corecount: 8
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | event service: False
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | sizes: {0: 2283436, 1: 2284122, 2: 2284150, 3: 2284321, 13: 2284349, 24: 2284405, 35: 2284561, 44: 2284851, 46: 2284879, 32909: 2324703, 32912: 2333699, 32914: 233
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | --------------------------------------------------
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | 
[2025-11-27 09:16:09] 2025-11-27 14:15:18,101 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | job 6898175052 has completed (purged errors)
[2025-11-27 09:16:09] 2025-11-27 14:15:18,120 | INFO     | overall cleanup function is called
[2025-11-27 09:16:09] 2025-11-27 14:15:19,134 | INFO     | --- collectZombieJob: --- 10, [3908831]
[2025-11-27 09:16:09] 2025-11-27 14:15:19,134 | INFO     | zombie collector waiting for pid 3908831
[2025-11-27 09:16:09] 2025-11-27 14:15:19,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:16:09] 2025-11-27 14:15:19,134 | INFO     | collected zombie processes
[2025-11-27 09:16:09] 2025-11-27 14:15:19,134 | INFO     | will attempt to kill all subprocesses of pid=3908831
[2025-11-27 09:16:09] 2025-11-27 14:15:19,567 | INFO     | process IDs to be killed: [3908831] (in reverse order)
[2025-11-27 09:16:09] 2025-11-27 14:15:19,726 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:16:09] 2025-11-27 14:15:19,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:16:09] 2025-11-27 14:15:19,750 | INFO     | did not find any defunct processes belonging to 3908831
[2025-11-27 09:16:09] 2025-11-27 14:15:19,773 | INFO     | did not find any defunct processes belonging to 3908831
[2025-11-27 09:16:09] 2025-11-27 14:15:19,778 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:16:09] 2025-11-27 14:15:19,780 | INFO     | ready for new job
[2025-11-27 09:16:09] 2025-11-27 14:15:19,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:16:09] 2025-11-27 14:15:19,783 | INFO     | ***************************************
[2025-11-27 09:16:09] 2025-11-27 14:15:19,783 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:16:09] 2025-11-27 14:15:19,783 | INFO     | ***************************************
[2025-11-27 09:16:09] 2025-11-27 14:15:19,783 | INFO     | 
[2025-11-27 09:16:09] 2025-11-27 14:15:19,788 | INFO     | architecture information:
[2025-11-27 09:16:09] 2025-11-27 14:15:19,793 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:16:09] 2025-11-27 14:15:19,811 | INFO     | cat /etc/os-release:
[2025-11-27 09:16:09] NAME="CentOS Linux"
[2025-11-27 09:16:09] VERSION="7 (Core)"
[2025-11-27 09:16:09] ID="centos"
[2025-11-27 09:16:09] ID_LIKE="rhel fedora"
[2025-11-27 09:16:09] VERSION_ID="7"
[2025-11-27 09:16:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:16:09] ANSI_COLOR="0;31"
[2025-11-27 09:16:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:16:09] HOME_URL="https://www.centos.org/"
[2025-11-27 09:16:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:16:09] 
[2025-11-27 09:16:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:16:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:16:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:16:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:16:09] 
[2025-11-27 09:16:09] 2025-11-27 14:15:19,812 | INFO     | ***************************************
[2025-11-27 09:16:09] 2025-11-27 14:15:20,314 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-11-27 09:16:09] 2025-11-27 14:15:20,343 | INFO     | sufficient remaining disk space (159235702784 B)
[2025-11-27 09:16:09] 2025-11-27 14:15:20,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:16:09] 2025-11-27 14:15:20,345 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:16:09] 2025-11-27 14:15:20,345 | INFO     | update_server=False
[2025-11-27 09:16:09] 2025-11-27 14:15:20,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:16:09] 2025-11-27 14:15:20,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:16:09] 2025-11-27 14:15:20,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:16:09] 2025-11-27 14:15:20,350 | INFO     | aborting loop
[2025-11-27 09:16:09] 2025-11-27 14:15:20,840 | INFO     | all job control threads have been joined
[2025-11-27 09:16:09] 2025-11-27 14:15:20,851 | INFO     | all data control threads have been joined
[2025-11-27 09:16:09] 2025-11-27 14:15:20,885 | INFO     | all payload control threads have been joined
[2025-11-27 09:16:09] 2025-11-27 14:15:21,350 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:21,356 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:21,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:16:09] 2025-11-27 14:15:21,477 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:21,846 | INFO     | [job] control thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:21,856 | INFO     | [data] control thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:21,876 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:21,891 | INFO     | [payload] control thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:22,096 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:22,310 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:22,326 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:22,364 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:22,817 | INFO     | [job] validate thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:23,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:16:09] 2025-11-27 14:15:23,472 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:24,118 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:24,354 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:30,474 | INFO     | job.realtimelogging is not enabled
[2025-11-27 09:16:09] 2025-11-27 14:15:31,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:16:09] 2025-11-27 14:15:50,777 | INFO     | PID=3822845 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:16:09] 2025-11-27 14:15:50,777 | INFO     | .. there are 34 such processes running
[2025-11-27 09:16:09] 2025-11-27 14:15:50,777 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:16:09] 2025-11-27 14:15:50,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:16:09] 2025-11-27 14:15:50,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:16:09] 2025-11-27 14:16:01,848 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:16:09] 2025-11-27 14:16:03,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865103595328)>', '<ExcThread(monitor, started 139864821434112)>']
[2025-11-27 09:16:09] 2025-11-27 14:16:03,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:16:09] 2025-11-27 14:16:03,861 | INFO     | [monitor] control thread has ended
[2025-11-27 09:16:09] 2025-11-27 14:16:08,400 | INFO     | all workflow threads have been joined
[2025-11-27 09:16:09] 2025-11-27 14:16:08,400 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:16:09] 2025-11-27 14:16:08,401 | INFO     | traces error code: 0
[2025-11-27 09:16:09] 2025-11-27 14:16:08,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:16:09] 2025-11-27 14:16:08,533 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:16:09] 2025-11-27 14:16:08,557 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:16:09] 2025-11-27 14:16:08,573 [wrapper] pilotpid: 3822845
[2025-11-27 09:16:09] 2025-11-27 14:16:08,587 [wrapper] Pilot exit status: 0
[2025-11-27 09:16:09] 2025-11-27 14:16:08,720 [wrapper] pandaids: 6898175052
[2025-11-27 09:16:09] 2025-11-27 14:16:09,242 [wrapper] cleanup supervisor_pilot 2408581 3822847
[2025-11-27 09:16:09] 2025-11-27 14:16:09,271 [wrapper] Test setup, not cleaning
[2025-11-27 09:16:09] 2025-11-27 14:16:09,284 [wrapper] apfmon messages muted
[2025-11-27 09:16:09] 2025-11-27 14:16:09,290 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:16:09] 2025-11-27 14:16:09,307 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:16:09]  *** Error codes and diagnostics ***
[2025-11-27 09:16:09]     "exeErrorCode": 0,
[2025-11-27 09:16:09]     "exeErrorDiag": "",
[2025-11-27 09:16:09]     "pilotErrorCode": 0,
[2025-11-27 09:16:09]     "pilotErrorDiag": "",
[2025-11-27 09:16:09]  *** Listing of results directory ***
[2025-11-27 09:16:09] total 1310180
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-27 09:16:09] -rwx------. 1 boincer umatlas     36292 Nov 25 22:47 runpilot2-wrapper.sh
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:16:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 09:16:09] -rw-r--r--. 2 boincer umatlas 408147102 Nov 27 00:03 EVNT.47483658._002452.pool.root.1
[2025-11-27 09:16:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 09:16:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 09:16:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:03 input.tar.gz
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:03 pandaJob.out
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas    991570 Nov 27 00:04 agis_schedconf.cvmfs.json
[2025-11-27 09:16:09] drwx------. 5 boincer umatlas      4096 Nov 27 00:05 pilot3
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas       533 Nov 27 09:09 boinc_task_state.xml
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 09:10 init_data.xml
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas 917631781 Nov 27 09:14 HITS.47556161._004344.pool.root.1
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas      1074 Nov 27 09:15 memory_monitor_summary.json
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas        95 Nov 27 09:15 pilot_heartbeat.json
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:15 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas   1776607 Nov 27 09:15 log.47556161._004344.job.log.tgz.1
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas      8635 Nov 27 09:15 heartbeat.json
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:16 boinc_mmap_file
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:16 wrapper_checkpoint.txt
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas      4898 Nov 27 09:16 pilotlog.txt
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas   4183418 Nov 27 09:16 log.47556161._004344.job.log.1
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas       353 Nov 27 09:16 output.list
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:16 runtime_log
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas   5980160 Nov 27 09:16 result.tar.gz
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas      9361 Nov 27 09:16 runtime_log.err
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas       666 Nov 27 09:16 7UKODmrfLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVrMKDmrfLGUn.diag
[2025-11-27 09:16:09] -rw-r--r--. 1 boincer umatlas     21155 Nov 27 09:16 stderr.txt
[2025-11-27 09:16:09] HITS file was successfully produced:
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas 917631781 Nov 27 09:14 shared/HITS.pool.root.1
[2025-11-27 09:16:09]  *** Contents of shared directory: ***
[2025-11-27 09:16:09] total 1301156
[2025-11-27 09:16:09] -rw-r--r--. 2 boincer umatlas 408147102 Nov 27 00:03 ATLAS.root_0
[2025-11-27 09:16:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 09:16:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:03 input.tar.gz
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas 917631781 Nov 27 09:14 HITS.pool.root.1
[2025-11-27 09:16:09] -rw-------. 1 boincer umatlas   5980160 Nov 27 09:16 result.tar.gz
09:16:11 (3790629): run_atlas exited; CPU time 139565.817019
09:16:11 (3790629): called boinc_finish(0)

</stderr_txt>
]]>

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