Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:44 (3778148): wrapper (7.7.26015): starting
00:02:44 (3778148): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:02:44] Arguments: --nthreads 8
[2025-11-27 00:02:44] Threads: 8
[2025-11-27 00:02:44] Checking for CVMFS
[2025-11-27 00:02:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:45] 2.13.2.0 14352 35362 225656 153347 1 517 35917095 40960001 25475 16776704 0 275831144 99.679 222611868 48624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:02:45] CVMFS is ok
[2025-11-27 00:02:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:45] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:45] Checking for apptainer binary...
[2025-11-27 00:02:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:45] Running /usr/bin/apptainer --version
[2025-11-27 00:02:45] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:46] c-208-36.aglt2.org
[2025-11-27 00:02:46] apptainer works
[2025-11-27 00:02:46] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:02:46] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:02:46] Starting ATLAS job with PandaID=6898120699
[2025-11-27 00:02:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:40:58]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:40:58] 2025-11-27 22:40:13,691 | INFO     | mean x: 1764251629.1023166
[2025-11-27 17:40:58] 2025-11-27 22:40:13,691 | INFO     | mean y: 2856353.772200772
[2025-11-27 17:40:58] 2025-11-27 22:40:13,691 | INFO     | intersect: -14290014542.428223
[2025-11-27 17:40:58] 2025-11-27 22:40:13,691 | INFO     | chi2: 11.751644849978403
[2025-11-27 17:40:58] 2025-11-27 22:40:13,692 | INFO     | sum of square deviations: 339789370965.2553
[2025-11-27 17:40:58] 2025-11-27 22:40:13,704 | INFO     | sum of deviations: 3133035317202.3516
[2025-11-27 17:40:58] 2025-11-27 22:40:13,704 | INFO     | mean x: 1764251476.6100874
[2025-11-27 17:40:58] 2025-11-27 22:40:13,704 | INFO     | mean y: 2866786.966052376
[2025-11-27 17:40:58] 2025-11-27 22:40:13,704 | INFO     | intersect: -16264452490.690239
[2025-11-27 17:40:58] 2025-11-27 22:40:13,705 | INFO     | chi2: 8.619144146444341
[2025-11-27 17:40:58] 2025-11-27 22:40:13,705 | INFO     | current chi2=8.619144146444341 (change=26.65584897708867 %)
[2025-11-27 17:40:58] 2025-11-27 22:40:13,706 | INFO     | sum of square deviations: 334869530974.4285
[2025-11-27 17:40:58] 2025-11-27 22:40:13,717 | INFO     | sum of deviations: 3133893049015.589
[2025-11-27 17:40:58] 2025-11-27 22:40:13,717 | INFO     | mean x: 1764251324.1150098
[2025-11-27 17:40:58] 2025-11-27 22:40:13,718 | INFO     | mean y: 2866810.5204678364
[2025-11-27 17:40:58] 2025-11-27 22:40:13,718 | INFO     | intersect: -16507966364.632706
[2025-11-27 17:40:58] 2025-11-27 22:40:13,718 | INFO     | chi2: 8.54701634985544
[2025-11-27 17:40:58] 2025-11-27 22:40:13,718 | INFO     | current chi2=8.54701634985544 (change=0.8368324669295206 %)
[2025-11-27 17:40:58] 2025-11-27 22:40:13,718 | INFO     | right removable region: 1025
[2025-11-27 17:40:58] 2025-11-27 22:40:13,719 | INFO     | sum of square deviations: 339788358365.2552
[2025-11-27 17:40:58] 2025-11-27 22:40:13,731 | INFO     | sum of deviations: 2380370562088.5596
[2025-11-27 17:40:58] 2025-11-27 22:40:13,731 | INFO     | mean x: 1764251781.6100874
[2025-11-27 17:40:58] 2025-11-27 22:40:13,731 | INFO     | mean y: 2869017.0038797283
[2025-11-27 17:40:58] 2025-11-27 22:40:13,731 | INFO     | intersect: -12356509701.152847
[2025-11-27 17:40:58] 2025-11-27 22:40:13,732 | INFO     | chi2: 7.501905190340694
[2025-11-27 17:40:58] 2025-11-27 22:40:13,732 | INFO     | current chi2=7.501905190340694 (change=36.162934754155025 %)
[2025-11-27 17:40:58] 2025-11-27 22:40:13,733 | INFO     | sum of square deviations: 334867694684.73004
[2025-11-27 17:40:58] 2025-11-27 22:40:13,744 | INFO     | sum of deviations: 2013323170241.5586
[2025-11-27 17:40:58] 2025-11-27 22:40:13,744 | INFO     | mean x: 1764251934.1179338
[2025-11-27 17:40:58] 2025-11-27 22:40:13,744 | INFO     | mean y: 2880392.09454191
[2025-11-27 17:40:58] 2025-11-27 22:40:13,745 | INFO     | intersect: -10604321656.604876
[2025-11-27 17:40:58] 2025-11-27 22:40:13,745 | INFO     | chi2: 4.246743162940662
[2025-11-27 17:40:58] 2025-11-27 22:40:13,745 | INFO     | current chi2=4.246743162940662 (change=43.391137915090084 %)
[2025-11-27 17:40:58] 2025-11-27 22:40:13,746 | INFO     | sum of square deviations: 329995065034.31165
[2025-11-27 17:40:58] 2025-11-27 22:40:13,757 | INFO     | sum of deviations: 1850212643839.9463
[2025-11-27 17:40:58] 2025-11-27 22:40:13,758 | INFO     | mean x: 1764252086.6209598
[2025-11-27 17:40:58] 2025-11-27 22:40:13,758 | INFO     | mean y: 2885490.806072478
[2025-11-27 17:40:58] 2025-11-27 22:40:13,758 | INFO     | intersect: -9888903397.75717
[2025-11-27 17:40:58] 2025-11-27 22:40:13,758 | INFO     | chi2: 3.5715929478723476
[2025-11-27 17:40:58] 2025-11-27 22:40:13,759 | INFO     | current chi2=3.5715929478723476 (change=15.898070336817968 %)
[2025-11-27 17:40:58] 2025-11-27 22:40:13,759 | INFO     | left removable region: 30
[2025-11-27 17:40:58] 2025-11-27 22:40:13,759 | INFO     | sum of square deviations: 305419501110.5688
[2025-11-27 17:40:58] 2025-11-27 22:40:13,770 | INFO     | sum of deviations: 1980827532559.2478
[2025-11-27 17:40:58] 2025-11-27 22:40:13,770 | INFO     | mean x: 1764252208.635176
[2025-11-27 17:40:58] 2025-11-27 22:40:13,770 | INFO     | mean y: 2903082.901507538
[2025-11-27 17:40:58] 2025-11-27 22:40:13,771 | INFO     | intersect: -11439324202.964779
[2025-11-27 17:40:58] 2025-11-27 22:40:13,771 | INFO     | chi2: 0.15142458442597018
[2025-11-27 17:40:58] 2025-11-27 22:40:13,771 | INFO     | current memory leak: 6.49 B/s (using 995 data points, chi2=0.15)
[2025-11-27 17:40:58] 2025-11-27 22:40:13,772 | INFO     | could have reported an average CPU frequency of 3776 MHz (38 samples)
[2025-11-27 17:40:58] 2025-11-27 22:40:13,772 | INFO     | ..............................
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . Timing measurements:
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . get job = 0 s
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . initial setup = 3 s
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . payload setup = 70 s
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . stage-in = 0 s
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . payload execution = 63192 s
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . stage-out = 2 s
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | . log creation = 0 s
[2025-11-27 17:40:58] 2025-11-27 22:40:13,773 | INFO     | ..............................
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | 
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | job summary report
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | --------------------------------------------------
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | PanDA job id: 6898120699
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | task id: 47556161
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | errors: (none)
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | pilot state: finished 
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | transexitcode: 0
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | exeerrorcode: 0
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | exeerrordiag: 
[2025-11-27 17:40:58] 2025-11-27 22:40:14,248 | INFO     | exitcode: 0
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | exitmsg: OK
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | cpuconsumptiontime: 141480 s
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | nevents: 1000
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | neventsw: 0
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | pid: 3875270
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | pgrp: 3875270
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | corecount: 8
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | event service: False
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | sizes: {0: 2284087, 1: 2284286, 11: 2284286, 22: 2284314, 33: 2284342, 43: 2284398, 47: 2284816, 54: 2284872, 63267: 2339576, 63271: 2348626, 63277: 2348816}
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | --------------------------------------------------
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | 
[2025-11-27 17:40:58] 2025-11-27 22:40:14,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | job 6898120699 has completed (purged errors)
[2025-11-27 17:40:58] 2025-11-27 22:40:14,269 | INFO     | overall cleanup function is called
[2025-11-27 17:40:58] 2025-11-27 22:40:14,832 | INFO     | PID=3800521 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 17:40:58] 2025-11-27 22:40:14,832 | INFO     | .. there are 27 such processes running
[2025-11-27 17:40:58] 2025-11-27 22:40:15,284 | INFO     | --- collectZombieJob: --- 10, [3875270]
[2025-11-27 17:40:58] 2025-11-27 22:40:15,284 | INFO     | zombie collector waiting for pid 3875270
[2025-11-27 17:40:58] 2025-11-27 22:40:15,284 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:40:58] 2025-11-27 22:40:15,284 | INFO     | collected zombie processes
[2025-11-27 17:40:58] 2025-11-27 22:40:15,285 | INFO     | will attempt to kill all subprocesses of pid=3875270
[2025-11-27 17:40:58] 2025-11-27 22:40:15,641 | INFO     | process IDs to be killed: [3875270] (in reverse order)
[2025-11-27 17:40:58] 2025-11-27 22:40:15,781 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:40:58] 2025-11-27 22:40:15,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:40:58] 2025-11-27 22:40:15,802 | INFO     | did not find any defunct processes belonging to 3875270
[2025-11-27 17:40:58] 2025-11-27 22:40:15,824 | INFO     | did not find any defunct processes belonging to 3875270
[2025-11-27 17:40:58] 2025-11-27 22:40:15,825 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:40:58] 2025-11-27 22:40:15,825 | INFO     | ready for new job
[2025-11-27 17:40:58] 2025-11-27 22:40:15,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:40:58] 2025-11-27 22:40:15,828 | INFO     | ***************************************
[2025-11-27 17:40:58] 2025-11-27 22:40:15,830 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:40:58] 2025-11-27 22:40:15,830 | INFO     | ***************************************
[2025-11-27 17:40:58] 2025-11-27 22:40:15,830 | INFO     | 
[2025-11-27 17:40:58] 2025-11-27 22:40:15,835 | INFO     | architecture information:
[2025-11-27 17:40:58] 2025-11-27 22:40:15,835 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:40:58] 2025-11-27 22:40:15,850 | INFO     | cat /etc/os-release:
[2025-11-27 17:40:58] NAME="CentOS Linux"
[2025-11-27 17:40:58] VERSION="7 (Core)"
[2025-11-27 17:40:58] ID="centos"
[2025-11-27 17:40:58] ID_LIKE="rhel fedora"
[2025-11-27 17:40:58] VERSION_ID="7"
[2025-11-27 17:40:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:40:58] ANSI_COLOR="0;31"
[2025-11-27 17:40:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:40:58] HOME_URL="https://www.centos.org/"
[2025-11-27 17:40:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:40:58] 
[2025-11-27 17:40:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:40:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:40:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:40:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:40:58] 
[2025-11-27 17:40:58] 2025-11-27 22:40:15,851 | INFO     | ***************************************
[2025-11-27 17:40:58] 2025-11-27 22:40:16,354 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 17:40:58] 2025-11-27 22:40:16,373 | INFO     | sufficient remaining disk space (160533839872 B)
[2025-11-27 17:40:58] 2025-11-27 22:40:16,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:40:58] 2025-11-27 22:40:16,373 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:40:58] 2025-11-27 22:40:16,373 | INFO     | update_server=False
[2025-11-27 17:40:58] 2025-11-27 22:40:16,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:40:58] 2025-11-27 22:40:16,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:40:58] 2025-11-27 22:40:16,421 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 17:40:58] 2025-11-27 22:40:16,421 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 17:40:58] 2025-11-27 22:40:16,421 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:58] 2025-11-27 22:40:16,421 | INFO     | will abort loop
[2025-11-27 17:40:58] 2025-11-27 22:40:17,116 | INFO     | all data control threads have been joined
[2025-11-27 17:40:58] 2025-11-27 22:40:17,325 | INFO     | all job control threads have been joined
[2025-11-27 17:40:58] 2025-11-27 22:40:17,378 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:17,426 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:17,518 | INFO     | all payload control threads have been joined
[2025-11-27 17:40:58] 2025-11-27 22:40:17,589 | INFO     | [job] validate thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:17,781 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:17,978 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,068 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,121 | INFO     | [data] control thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,297 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:40:58] 2025-11-27 22:40:18,330 | INFO     | [job] control thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,379 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,523 | INFO     | [payload] control thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,703 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,742 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:18,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:58] 2025-11-27 22:40:19,839 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:22,332 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:26,524 | INFO     | job.realtimelogging is not enabled
[2025-11-27 17:40:58] 2025-11-27 22:40:27,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:40:58] 2025-11-27 22:40:47,366 | INFO     | PID=3800521 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:40:58] 2025-11-27 22:40:47,366 | INFO     | .. there are 28 such processes running
[2025-11-27 17:40:58] 2025-11-27 22:40:47,366 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:40:58] 2025-11-27 22:40:47,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:40:58] 2025-11-27 22:40:47,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:40:58] 2025-11-27 22:40:51,719 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:40:58] 2025-11-27 22:40:52,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140235902318400)>', '<ExcThread(monitor, started 140235539195648)>']
[2025-11-27 17:40:58] 2025-11-27 22:40:53,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:40:58] 2025-11-27 22:40:53,392 | INFO     | [monitor] control thread has ended
[2025-11-27 17:40:58] 2025-11-27 22:40:57,960 | INFO     | all workflow threads have been joined
[2025-11-27 17:40:58] 2025-11-27 22:40:57,960 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:40:58] 2025-11-27 22:40:57,960 | INFO     | traces error code: 0
[2025-11-27 17:40:58] 2025-11-27 22:40:57,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:40:58] 2025-11-27 22:40:58,083 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:40:58] 2025-11-27 22:40:58,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:40:58] 2025-11-27 22:40:58,089 [wrapper] pilotpid: 3800521
[2025-11-27 17:40:58] 2025-11-27 22:40:58,092 [wrapper] Pilot exit status: 0
[2025-11-27 17:40:58] 2025-11-27 22:40:58,124 [wrapper] pandaids: 6898120699
[2025-11-27 17:40:58] 2025-11-27 22:40:58,222 [wrapper] cleanup supervisor_pilot 1440728 3800522
[2025-11-27 17:40:58] 2025-11-27 22:40:58,225 [wrapper] Test setup, not cleaning
[2025-11-27 17:40:58] 2025-11-27 22:40:58,228 [wrapper] apfmon messages muted
[2025-11-27 17:40:58] 2025-11-27 22:40:58,232 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:40:58] 2025-11-27 22:40:58,235 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:40:58]  *** Error codes and diagnostics ***
[2025-11-27 17:40:58]     "exeErrorCode": 0,
[2025-11-27 17:40:58]     "exeErrorDiag": "",
[2025-11-27 17:40:58]     "pilotErrorCode": 0,
[2025-11-27 17:40:58]     "pilotErrorDiag": "",
[2025-11-27 17:40:58]  *** Listing of results directory ***
[2025-11-27 17:40:58] total 1318960
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:40 queuedata.json
[2025-11-27 17:40:58] -rwx------. 1 boincer umatlas     36292 Nov 25 22:42 runpilot2-wrapper.sh
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:40:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 17:40:58] -rw-r--r--. 2 boincer umatlas 410142561 Nov 27 00:02 EVNT.47483658._002445.pool.root.1
[2025-11-27 17:40:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 17:40:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 17:40:58] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas      2782 Nov 27 00:02 pandaJob.out
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 17:40:58] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas       532 Nov 27 17:33 boinc_task_state.xml
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 17:39 init_data.xml
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas 916155733 Nov 27 17:39 HITS.47556161._004271.pool.root.1
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas        95 Nov 27 17:39 pilot_heartbeat.json
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas      1077 Nov 27 17:40 memory_monitor_summary.json
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas   2160668 Nov 27 17:40 log.47556161._004271.job.log.tgz.1
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas      8642 Nov 27 17:40 heartbeat.json
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:40 wrapper_checkpoint.txt
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas      5083 Nov 27 17:40 pilotlog.txt
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas   8033837 Nov 27 17:40 log.47556161._004271.job.log.1
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:40 boinc_mmap_file
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas       353 Nov 27 17:40 output.list
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:40 runtime_log
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas  10219520 Nov 27 17:40 result.tar.gz
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 17:40 runtime_log.err
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas       666 Nov 27 17:40 mmfMDmnbLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0qMKDmmC6Kym.diag
[2025-11-27 17:40:58] -rw-r--r--. 1 boincer umatlas     21328 Nov 27 17:40 stderr.txt
[2025-11-27 17:40:58] HITS file was successfully produced:
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas 916155733 Nov 27 17:39 shared/HITS.pool.root.1
[2025-11-27 17:40:58]  *** Contents of shared directory: ***
[2025-11-27 17:40:58] total 1305800
[2025-11-27 17:40:58] -rw-r--r--. 2 boincer umatlas 410142561 Nov 27 00:02 ATLAS.root_0
[2025-11-27 17:40:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 17:40:58] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas 916155733 Nov 27 17:39 HITS.pool.root.1
[2025-11-27 17:40:58] -rw-------. 1 boincer umatlas  10219520 Nov 27 17:40 result.tar.gz
17:40:59 (3778148): run_atlas exited; CPU time 142432.079675
17:40:59 (3778148): called boinc_finish(0)

</stderr_txt>
]]>

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