Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:15:34 (2398468): wrapper (7.7.26015): starting
23:15:34 (2398468): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:15:34] Arguments: --nthreads 8
[2025-11-26 23:15:34] Threads: 8
[2025-11-26 23:15:34] Checking for CVMFS
[2025-11-26 23:15:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:15:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:15:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:15:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:15:35] 2.13.3.0 17216 30862 470160 153347 3 108 29460209 32935937 85617 16776704 0 546941061 99.679 431642398 47908 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 23:15:35] CVMFS is ok
[2025-11-26 23:15:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:15:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:15:35] Further information can be found at the LHC@home message board.
[2025-11-26 23:15:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:15:35] Checking for apptainer binary...
[2025-11-26 23:15:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:15:35] Running /usr/bin/apptainer --version
[2025-11-26 23:15:35] apptainer version 1.4.4-1.el9
[2025-11-26 23:15:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:15:35] c7-9-14.aglt2.org
[2025-11-26 23:15:35] apptainer works
[2025-11-26 23:15:35] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:15:35] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:15:35] Starting ATLAS job with PandaID=6897139703
[2025-11-26 23:15:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:12:57]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:12:57] 2025-11-27 12:12:01,780 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:12:57] 2025-11-27 12:12:01,780 | INFO     | sum of square deviations: 31580835740.252594
[2025-11-27 07:12:57] 2025-11-27 12:12:01,783 | INFO     | sum of deviations: 244397746885.41284
[2025-11-27 07:12:57] 2025-11-27 12:12:01,783 | INFO     | mean x: 1764231242.719486
[2025-11-27 07:12:57] 2025-11-27 12:12:01,783 | INFO     | mean y: 2859944.8886509635
[2025-11-27 07:12:57] 2025-11-27 12:12:01,783 | INFO     | intersect: -13650171414.12394
[2025-11-27 07:12:57] 2025-11-27 12:12:01,784 | INFO     | chi2: 8.395499540036706
[2025-11-27 07:12:57] 2025-11-27 12:12:01,784 | INFO     | sum of square deviations: 30577375215.136314
[2025-11-27 07:12:57] 2025-11-27 12:12:01,787 | INFO     | sum of deviations: 409411294411.54517
[2025-11-27 07:12:57] 2025-11-27 12:12:01,787 | INFO     | mean x: 1764231090.2272727
[2025-11-27 07:12:57] 2025-11-27 12:12:01,787 | INFO     | mean y: 2885028.528138528
[2025-11-27 07:12:57] 2025-11-27 12:12:01,787 | INFO     | intersect: -23619029187.754578
[2025-11-27 07:12:57] 2025-11-27 12:12:01,787 | INFO     | chi2: 4.895045327245805
[2025-11-27 07:12:57] 2025-11-27 12:12:01,787 | INFO     | current chi2=4.895045327245805 (change=41.69441253731039 %)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,787 | INFO     | sum of square deviations: 29595375527.431095
[2025-11-27 07:12:57] 2025-11-27 12:12:01,790 | INFO     | sum of deviations: 494430625525.90356
[2025-11-27 07:12:57] 2025-11-27 12:12:01,790 | INFO     | mean x: 1764230937.7330415
[2025-11-27 07:12:57] 2025-11-27 12:12:01,790 | INFO     | mean y: 2898185.2778993435
[2025-11-27 07:12:57] 2025-11-27 12:12:01,790 | INFO     | intersect: -29470956785.982693
[2025-11-27 07:12:57] 2025-11-27 12:12:01,791 | INFO     | chi2: 3.5716689915174067
[2025-11-27 07:12:57] 2025-11-27 12:12:01,791 | INFO     | current chi2=3.5716689915174067 (change=27.035016986716965 %)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,791 | INFO     | sum of square deviations: 28634631686.194733
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | sum of deviations: 484334056074.97345
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | mean x: 1764230785.238938
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | mean y: 2896582.6946902657
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | intersect: -29837789389.147892
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | chi2: 3.5712628003890305
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | current chi2=3.5712628003890305 (change=0.011372586019052534 %)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | right removable region: 451
[2025-11-27 07:12:57] 2025-11-27 12:12:01,794 | INFO     | sum of square deviations: 30577170255.136307
[2025-11-27 07:12:57] 2025-11-27 12:12:01,797 | INFO     | sum of deviations: 77559493234.22739
[2025-11-27 07:12:57] 2025-11-27 12:12:01,797 | INFO     | mean x: 1764231395.2272727
[2025-11-27 07:12:57] 2025-11-27 12:12:01,797 | INFO     | mean y: 2885279.1406926406
[2025-11-27 07:12:57] 2025-11-27 12:12:01,797 | INFO     | intersect: -4472116554.580537
[2025-11-27 07:12:57] 2025-11-27 12:12:01,798 | INFO     | chi2: 5.042169022237242
[2025-11-27 07:12:57] 2025-11-27 12:12:01,798 | INFO     | current chi2=5.042169022237242 (change=39.94200109008407 %)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,798 | INFO     | sum of square deviations: 29595050031.894962
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | sum of deviations: 47456351797.87088
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | mean x: 1764231547.7308533
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | mean y: 2889946.3566739606
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | intersect: -2826096417.639575
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | chi2: 4.963352328435581
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | current chi2=4.963352328435581 (change=1.5631505698055492 %)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | left removable region: 20
[2025-11-27 07:12:57] 2025-11-27 12:12:01,801 | INFO     | sum of square deviations: 24825815405.860798
[2025-11-27 07:12:57] 2025-11-27 12:12:01,804 | INFO     | sum of deviations: 252382562488.2716
[2025-11-27 07:12:57] 2025-11-27 12:12:01,804 | INFO     | mean x: 1764231364.763341
[2025-11-27 07:12:57] 2025-11-27 12:12:01,804 | INFO     | mean y: 2934137.561484919
[2025-11-27 07:12:57] 2025-11-27 12:12:01,804 | INFO     | intersect: -17932478068.719433
[2025-11-27 07:12:57] 2025-11-27 12:12:01,804 | INFO     | chi2: 0.01913077915321223
[2025-11-27 07:12:57] 2025-11-27 12:12:01,804 | INFO     | current memory leak: 10.17 B/s (using 431 data points, chi2=0.02)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | could have reported an average CPU frequency of 3799 MHz (19 samples)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | ..............................
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . Timing measurements:
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . get job = 0 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . initial setup = 2 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . payload setup = 18 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . stage-in = 0 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . payload execution = 28467 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . stage-out = 3 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | . log creation = 0 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,805 | INFO     | ..............................
[2025-11-27 07:12:57] 2025-11-27 12:12:01,873 | INFO     | 
[2025-11-27 07:12:57] 2025-11-27 12:12:01,873 | INFO     | job summary report
[2025-11-27 07:12:57] 2025-11-27 12:12:01,873 | INFO     | --------------------------------------------------
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | PanDA job id: 6897139703
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | task id: 47556173
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | errors: (none)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | pilot state: finished 
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | transexitcode: 0
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | exeerrorcode: 0
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | exeerrordiag: 
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | exitcode: 0
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | exitmsg: OK
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | cpuconsumptiontime: 133152 s
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | nevents: 1000
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | neventsw: 0
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | pid: 2415906
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | pgrp: 2415906
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | corecount: 8
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | event service: False
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | sizes: {0: 2284263, 1: 2284263, 11: 2284291, 14: 2284581, 22: 2284609, 28489: 2322390, 28494: 2331384, 28495: 2331440, 28523: 2331686}
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | --------------------------------------------------
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | 
[2025-11-27 07:12:57] 2025-11-27 12:12:01,874 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 07:12:57] 2025-11-27 12:12:01,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | job 6897139703 has completed (purged errors)
[2025-11-27 07:12:57] 2025-11-27 12:12:01,987 | INFO     | overall cleanup function is called
[2025-11-27 07:12:57] 2025-11-27 12:12:03,014 | INFO     | --- collectZombieJob: --- 10, [2415906]
[2025-11-27 07:12:57] 2025-11-27 12:12:03,014 | INFO     | zombie collector waiting for pid 2415906
[2025-11-27 07:12:57] 2025-11-27 12:12:03,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:12:57] 2025-11-27 12:12:03,015 | INFO     | collected zombie processes
[2025-11-27 07:12:57] 2025-11-27 12:12:03,015 | INFO     | will attempt to kill all subprocesses of pid=2415906
[2025-11-27 07:12:57] 2025-11-27 12:12:04,673 | INFO     | process IDs to be killed: [2415906] (in reverse order)
[2025-11-27 07:12:57] 2025-11-27 12:12:04,936 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:12:57] 2025-11-27 12:12:04,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:12:57] 2025-11-27 12:12:05,201 | INFO     | did not find any defunct processes belonging to 2415906
[2025-11-27 07:12:57] 2025-11-27 12:12:05,242 | INFO     | did not find any defunct processes belonging to 2415906
[2025-11-27 07:12:57] 2025-11-27 12:12:05,248 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:12:57] 2025-11-27 12:12:05,248 | INFO     | ready for new job
[2025-11-27 07:12:57] 2025-11-27 12:12:05,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:12:57] 2025-11-27 12:12:05,252 | INFO     | ***************************************
[2025-11-27 07:12:57] 2025-11-27 12:12:05,252 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:12:57] 2025-11-27 12:12:05,252 | INFO     | ***************************************
[2025-11-27 07:12:57] 2025-11-27 12:12:05,252 | INFO     | 
[2025-11-27 07:12:57] 2025-11-27 12:12:05,321 | INFO     | architecture information:
[2025-11-27 07:12:57] 2025-11-27 12:12:05,321 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:12:57] 2025-11-27 12:12:05,407 | INFO     | cat /etc/os-release:
[2025-11-27 07:12:57] NAME="CentOS Linux"
[2025-11-27 07:12:57] VERSION="7 (Core)"
[2025-11-27 07:12:57] ID="centos"
[2025-11-27 07:12:57] ID_LIKE="rhel fedora"
[2025-11-27 07:12:57] VERSION_ID="7"
[2025-11-27 07:12:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:12:57] ANSI_COLOR="0;31"
[2025-11-27 07:12:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:12:57] HOME_URL="https://www.centos.org/"
[2025-11-27 07:12:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:12:57] 
[2025-11-27 07:12:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:12:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:12:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:12:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:12:57] 
[2025-11-27 07:12:57] 2025-11-27 12:12:05,407 | INFO     | ***************************************
[2025-11-27 07:12:57] 2025-11-27 12:12:05,934 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 07:12:57] 2025-11-27 12:12:06,051 | INFO     | sufficient remaining disk space (60047753216 B)
[2025-11-27 07:12:57] 2025-11-27 12:12:06,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:12:57] 2025-11-27 12:12:06,051 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:12:57] 2025-11-27 12:12:06,052 | INFO     | update_server=False
[2025-11-27 07:12:57] 2025-11-27 12:12:06,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:12:57] 2025-11-27 12:12:06,095 | INFO     | all job control threads have been joined
[2025-11-27 07:12:57] 2025-11-27 12:12:06,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:12:57] 2025-11-27 12:12:06,235 | INFO     | all data control threads have been joined
[2025-11-27 07:12:57] 2025-11-27 12:12:06,253 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 07:12:57] 2025-11-27 12:12:06,253 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 07:12:57] 2025-11-27 12:12:06,254 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:12:57] 2025-11-27 12:12:06,254 | INFO     | will abort loop
[2025-11-27 07:12:57] 2025-11-27 12:12:06,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:12:57] 2025-11-27 12:12:06,992 | INFO     | all payload control threads have been joined
[2025-11-27 07:12:57] 2025-11-27 12:12:07,057 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,101 | INFO     | [job] control thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:12:57] 2025-11-27 12:12:07,163 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,241 | INFO     | [data] control thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,259 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,262 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,704 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,765 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,851 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,880 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:07,998 | INFO     | [payload] control thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:08,102 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:08,103 | INFO     | [job] validate thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:08,229 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:08,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:11,125 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:12:57] 2025-11-27 12:12:34,759 | INFO     | PID=2406649 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:12:57] 2025-11-27 12:12:34,759 | INFO     | .. there are 108 such processes running
[2025-11-27 07:12:57] 2025-11-27 12:12:34,759 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:12:57] 2025-11-27 12:12:34,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:12:57] 2025-11-27 12:12:34,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:12:57] 2025-11-27 12:12:51,515 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:12:57] 2025-11-27 12:12:51,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115089135424)>', '<ExcThread(monitor, started 140114332194560)>']
[2025-11-27 07:12:57] 2025-11-27 12:12:51,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:12:57] 2025-11-27 12:12:51,876 | INFO     | [monitor] control thread has ended
[2025-11-27 07:12:57] 2025-11-27 12:12:56,704 | INFO     | all workflow threads have been joined
[2025-11-27 07:12:57] 2025-11-27 12:12:56,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:12:57] 2025-11-27 12:12:56,705 | INFO     | traces error code: 0
[2025-11-27 07:12:57] 2025-11-27 12:12:56,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:12:57] 2025-11-27 12:12:56,973 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:12:57] 2025-11-27 12:12:57,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:12:57] 2025-11-27 12:12:57,042 [wrapper] pilotpid: 2406649
[2025-11-27 07:12:57] 2025-11-27 12:12:57,045 [wrapper] Pilot exit status: 0
[2025-11-27 07:12:57] 2025-11-27 12:12:57,100 [wrapper] pandaids: 6897139703
[2025-11-27 07:12:57] 2025-11-27 12:12:57,299 [wrapper] cleanup supervisor_pilot 3376365 2406650
[2025-11-27 07:12:57] 2025-11-27 12:12:57,304 [wrapper] Test setup, not cleaning
[2025-11-27 07:12:57] 2025-11-27 12:12:57,356 [wrapper] apfmon messages muted
[2025-11-27 07:12:57] 2025-11-27 12:12:57,360 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:12:57] 2025-11-27 12:12:57,362 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:12:57]  *** Error codes and diagnostics ***
[2025-11-27 07:12:57]     "exeErrorCode": 0,
[2025-11-27 07:12:57]     "exeErrorDiag": "",
[2025-11-27 07:12:57]     "pilotErrorCode": 0,
[2025-11-27 07:12:57]     "pilotErrorDiag": "",
[2025-11-27 07:12:57]  *** Listing of results directory ***
[2025-11-27 07:12:57] total 1307456
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 07:12:57] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas       100 Nov 26 23:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:12:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 23:15 run_atlas
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas       105 Nov 26 23:15 job.xml
[2025-11-27 07:12:57] -rw-r--r--. 2 boincer umatlas 411313841 Nov 26 23:15 EVNT.47483658._003087.pool.root.1
[2025-11-27 07:12:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:15 start_atlas.sh
[2025-11-27 07:12:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 23:15 shared
[2025-11-27 07:12:57] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 23:15 input.tar.gz
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas         0 Nov 26 23:15 boinc_lockfile
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 23:15 pandaJob.out
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas        57 Nov 26 23:15 setup.sh.local
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas    991570 Nov 26 23:15 agis_schedconf.cvmfs.json
[2025-11-27 07:12:57] drwx------. 5 boincer umatlas      4096 Nov 26 23:16 pilot3
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas       532 Nov 27 07:01 boinc_task_state.xml
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas 912966409 Nov 27 07:10 HITS.47556173._000700.pool.root.1
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas      1053 Nov 27 07:11 memory_monitor_summary.json
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas   1719785 Nov 27 07:11 log.47556173._000700.job.log.tgz.1
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas        95 Nov 27 07:11 pilot_heartbeat.json
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas      8579 Nov 27 07:12 heartbeat.json
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas      7171 Nov 27 07:12 init_data.xml
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:12 wrapper_checkpoint.txt
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:12 boinc_mmap_file
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas      5011 Nov 27 07:12 pilotlog.txt
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas   3605617 Nov 27 07:12 log.47556173._000700.job.log.1
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas       353 Nov 27 07:12 output.list
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:12 runtime_log
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas   5345280 Nov 27 07:12 result.tar.gz
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas       659 Nov 27 07:12 yb5LDmcWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCZJKDm7dkI8n.diag
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 07:12 runtime_log.err
[2025-11-27 07:12:57] -rw-r--r--. 1 boincer umatlas      2143 Nov 27 07:12 stderr.txt
[2025-11-27 07:12:57] HITS file was successfully produced:
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas 912966409 Nov 27 07:10 shared/HITS.pool.root.1
[2025-11-27 07:12:57]  *** Contents of shared directory: ***
[2025-11-27 07:12:57] total 1299072
[2025-11-27 07:12:57] -rw-r--r--. 2 boincer umatlas 411313841 Nov 26 23:15 ATLAS.root_0
[2025-11-27 07:12:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:15 start_atlas.sh
[2025-11-27 07:12:57] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 23:15 input.tar.gz
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas 912966409 Nov 27 07:10 HITS.pool.root.1
[2025-11-27 07:12:57] -rw-------. 1 boincer umatlas   5345280 Nov 27 07:12 result.tar.gz
07:12:59 (2398468): run_atlas exited; CPU time 133706.409026
07:12:59 (2398468): called boinc_finish(0)

</stderr_txt>
]]>

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