Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:02 (3451478): wrapper (7.7.26015): starting
00:02:02 (3451478): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:02:02] Arguments: --nthreads 9
[2025-11-27 00:02:02] Threads: 9
[2025-11-27 00:02:02] Checking for CVMFS
[2025-11-27 00:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:05] 2.13.3.0 11226 29346 347504 153347 0 334 26658830 32935937 21779 16776704 0 69327057 99.476 96442754 40345 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:05] CVMFS is ok
[2025-11-27 00:02:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:05] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:05] Checking for apptainer binary...
[2025-11-27 00:02:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:05] Running /usr/bin/apptainer --version
[2025-11-27 00:02:05] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:06] c6-2-29-3.aglt2.org
[2025-11-27 00:02:06] apptainer works
[2025-11-27 00:02:06] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:02:06] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:02:06] Starting ATLAS job with PandaID=6898120685
[2025-11-27 00:02:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 03:54:34]  *** The last 200 lines of the pilot log: ***
[2025-11-28 03:54:34] 2025-11-28 05:49:08,824 | INFO     | time since job start (89156s) is within the limit (172800.0s)
[2025-11-28 03:54:34] 2025-11-28 05:49:09,585 | INFO     | monitor loop #5375: job 0:6898120685 is in state 'finished'
[2025-11-28 03:54:34] 2025-11-28 05:49:09,585 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 03:54:34] 2025-11-28 05:49:10,837 | INFO     | time since job start (89158s) is within the limit (172800.0s)
[2025-11-28 03:54:34] 2025-11-28 05:49:12,129 | INFO     | monitor loop #5376: job 0:6898120685 is in state 'finished'
[2025-11-28 03:54:34] 2025-11-28 05:49:12,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 03:54:34] 2025-11-28 05:49:12,844 | INFO     | time since job start (89160s) is within the limit (172800.0s)
[2025-11-28 03:54:34] 2025-11-28 05:49:14,637 | INFO     | monitor loop #5377: job 0:6898120685 is in state 'finished'
[2025-11-28 03:54:34] 2025-11-28 05:49:14,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 03:54:34] 2025-11-28 05:49:14,893 | INFO     | time since job start (89162s) is within the limit (172800.0s)
[2025-11-28 03:54:34] 2025-11-28 05:49:16,900 | INFO     | time since job start (89164s) is within the limit (172800.0s)
[2025-11-28 03:54:34] 2025-11-28 05:49:17,142 | INFO     | monitor loop #5378: job 0:6898120685 is in state 'finished'
[2025-11-28 03:54:34] 2025-11-28 05:49:17,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 03:54:34] 2025-11-28 05:49:18,925 | INFO     | time since job start (89166s) is within the limit (172800.0s)
[2025-11-28 03:54:34] 2025-11-28 05:49:19,647 | INFO     | monitor loop #5379: job 0:6898120685 is in state 'finished'
[2025-11-28 03:54:34] 2025-11-28 05:49:19,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 03:54:34] 2025-11-28 05:49:20,480 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 03:54:34] 2025-11-28 05:49:20,483 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2946.733410714285
[2025-11-28 03:54:34] 2025-11-28 05:49:20,499 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6898120685/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 03:54:34] 2025-11-28 05:49:20,500 | INFO     | extracted standard info from prmon json
[2025-11-28 03:54:34] 2025-11-28 05:49:20,501 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 03:54:34] 2025-11-28 05:49:20,501 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 03:54:34] 2025-11-28 05:49:20,528 | INFO     | fitting pss+swap vs Time
[2025-11-28 03:54:34] 2025-11-28 05:49:20,530 | INFO     | sum of square deviations: 963058842071.799
[2025-11-28 03:54:34] 2025-11-28 05:49:20,706 | INFO     | sum of deviations: 6019609206784.487
[2025-11-28 03:54:34] 2025-11-28 05:49:20,706 | INFO     | mean x: 1764264399.9163811
[2025-11-28 03:54:34] 2025-11-28 05:49:20,706 | INFO     | mean y: 3012199.962988348
[2025-11-28 03:54:34] 2025-11-28 05:49:20,706 | INFO     | intersect: -11024540594.310604
[2025-11-28 03:54:34] 2025-11-28 05:49:20,726 | INFO     | chi2: 23.96116077861336
[2025-11-28 03:54:34] 2025-11-28 05:49:20,728 | INFO     | sum of square deviations: 953192560990.8724
[2025-11-28 03:54:34] 2025-11-28 05:49:20,899 | INFO     | sum of deviations: 6566831001219.175
[2025-11-28 03:54:34] 2025-11-28 05:49:20,912 | INFO     | mean x: 1764264247.422971
[2025-11-28 03:54:34] 2025-11-28 05:49:20,912 | INFO     | mean y: 3020656.1623108666
[2025-11-28 03:54:34] 2025-11-28 05:49:20,912 | INFO     | intersect: -12151527782.902483
[2025-11-28 03:54:34] 2025-11-28 05:49:20,914 | INFO     | chi2: 20.23948736979017
[2025-11-28 03:54:34] 2025-11-28 05:49:20,914 | INFO     | current chi2=20.23948736979017 (change=15.532108161241446 %)
[2025-11-28 03:54:34] 2025-11-28 05:49:20,914 | INFO     | right removable region: 1453
[2025-11-28 03:54:34] 2025-11-28 05:49:20,933 | INFO     | sum of square deviations: 953190944188.7184
[2025-11-28 03:54:34] 2025-11-28 05:49:20,953 | INFO     | time since job start (89168s) is within the limit (172800.0s)
[2025-11-28 03:54:34] 2025-11-28 05:49:21,166 | INFO     | sum of deviations: 5385312327673.848
[2025-11-28 03:54:34] 2025-11-28 05:49:21,167 | INFO     | mean x: 1764264552.4222834
[2025-11-28 03:54:34] 2025-11-28 05:49:21,179 | INFO     | mean y: 3022001.967675378
[2025-11-28 03:54:34] 2025-11-28 05:49:21,179 | INFO     | intersect: -9964671985.646015
[2025-11-28 03:54:34] 2025-11-28 05:49:21,181 | INFO     | chi2: 19.533215212981172
[2025-11-28 03:54:34] 2025-11-28 05:49:21,181 | INFO     | current chi2=19.533215212981172 (change=18.47967887091834 %)
[2025-11-28 03:54:34] 2025-11-28 05:49:21,181 | INFO     | left removable region: 10
[2025-11-28 03:54:34] 2025-11-28 05:49:21,201 | INFO     | sum of square deviations: 931721147437.2622
[2025-11-28 03:54:34] 2025-11-28 05:49:21,417 | INFO     | sum of deviations: 5468425309312.895
[2025-11-28 03:54:34] 2025-11-28 05:49:21,418 | INFO     | mean x: 1764264521.9369369
[2025-11-28 03:54:34] 2025-11-28 05:49:21,418 | INFO     | mean y: 3040895.878031878
[2025-11-28 03:54:34] 2025-11-28 05:49:21,418 | INFO     | intersect: -10351718991.905233
[2025-11-28 03:54:34] 2025-11-28 05:49:21,420 | INFO     | chi2: 11.786199060839287
[2025-11-28 03:54:34] 2025-11-28 05:49:21,420 | INFO     | current memory leak: 5.87 B/s (using 1443 data points, chi2=11.79)
[2025-11-28 03:54:34] 2025-11-28 05:49:21,530 | INFO     | could have reported an average CPU frequency of 2845 MHz (52 samples)
[2025-11-28 03:54:34] 2025-11-28 05:49:21,531 | INFO     | ..............................
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . Timing measurements:
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . get job = 0 s
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . initial setup = 6 s
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . payload setup = 42 s
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . stage-in = 0 s
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . payload execution = 89011 s
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . stage-out = 10 s
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | . log creation = 3 s
[2025-11-28 03:54:34] 2025-11-28 05:49:21,532 | INFO     | ..............................
[2025-11-28 03:54:34] 2025-11-28 05:49:22,636 | INFO     | 
[2025-11-28 03:54:34] 2025-11-28 05:49:22,636 | INFO     | job summary report
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | --------------------------------------------------
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | PanDA job id: 6898120685
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | task id: 47556161
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | errors: (none)
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | pilot state: finished 
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | transexitcode: 0
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | exeerrorcode: 0
[2025-11-28 03:54:34] 2025-11-28 05:49:22,637 | INFO     | exeerrordiag: 
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | exitcode: 0
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | exitmsg: OK
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | cpuconsumptiontime: 252809 s
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | nevents: 1000
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | neventsw: 0
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | pid: 3473412
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | pgrp: 3473412
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | corecount: 9
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | event service: False
[2025-11-28 03:54:34] 2025-11-28 05:49:22,638 | INFO     | sizes: {0: 2284037, 1: 2284121, 2: 2284320, 13: 2284320, 24: 2284376, 30: 2284666, 35: 2284822, 89055: 2350716, 89067: 2359710, 89068: 2359766, 89104: 2360012}
[2025-11-28 03:54:34] 2025-11-28 05:49:22,639 | INFO     | --------------------------------------------------
[2025-11-28 03:54:34] 2025-11-28 05:49:22,639 | INFO     | 
[2025-11-28 03:54:34] 2025-11-28 05:49:22,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-28 03:54:34] 2025-11-28 05:49:22,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 03:54:34] 2025-11-28 05:49:22,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 03:54:34] 2025-11-28 05:49:22,969 | INFO     | job 6898120685 has completed (purged errors)
[2025-11-28 03:54:34] 2025-11-28 05:49:22,969 | INFO     | overall cleanup function is called
[2025-11-28 03:54:34] 2025-11-28 05:49:24,025 | INFO     | --- collectZombieJob: --- 10, [3473412]
[2025-11-28 03:54:34] 2025-11-28 05:49:24,025 | INFO     | zombie collector waiting for pid 3473412
[2025-11-28 03:54:34] 2025-11-28 05:49:24,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 03:54:34] 2025-11-28 05:49:24,026 | INFO     | collected zombie processes
[2025-11-28 03:54:34] 2025-11-28 05:49:24,026 | INFO     | will attempt to kill all subprocesses of pid=3473412
[2025-11-28 03:54:34] 2025-11-28 05:49:26,218 | INFO     | process IDs to be killed: [3473412] (in reverse order)
[2025-11-28 03:54:34] 2025-11-28 05:49:26,414 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 03:54:34] 2025-11-28 05:49:26,415 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 03:54:34] 2025-11-28 05:49:26,780 | INFO     | did not find any defunct processes belonging to 3473412
[2025-11-28 03:54:34] 2025-11-28 05:49:26,966 | INFO     | did not find any defunct processes belonging to 3473412
[2025-11-28 03:54:34] 2025-11-28 05:49:27,037 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 03:54:34] 2025-11-28 05:49:27,038 | INFO     | ready for new job
[2025-11-28 03:54:34] 2025-11-28 05:49:27,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 03:54:34] 2025-11-28 05:49:27,126 | INFO     | ***************************************
[2025-11-28 03:54:34] 2025-11-28 05:49:27,128 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 03:54:34] 2025-11-28 05:49:27,128 | INFO     | ***************************************
[2025-11-28 03:54:34] 2025-11-28 05:49:27,128 | INFO     | 
[2025-11-28 03:54:34] 2025-11-28 05:49:27,192 | INFO     | architecture information:
[2025-11-28 03:54:34] 2025-11-28 05:49:27,224 | INFO     | executing command: cat /etc/os-release
[2025-11-28 03:54:34] 2025-11-28 05:49:27,314 | INFO     | cat /etc/os-release:
[2025-11-28 03:54:34] NAME="CentOS Linux"
[2025-11-28 03:54:34] VERSION="7 (Core)"
[2025-11-28 03:54:34] ID="centos"
[2025-11-28 03:54:34] ID_LIKE="rhel fedora"
[2025-11-28 03:54:34] VERSION_ID="7"
[2025-11-28 03:54:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 03:54:34] ANSI_COLOR="0;31"
[2025-11-28 03:54:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 03:54:34] HOME_URL="https://www.centos.org/"
[2025-11-28 03:54:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 03:54:34] 
[2025-11-28 03:54:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 03:54:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 03:54:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 03:54:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 03:54:34] 
[2025-11-28 03:54:34] 2025-11-28 05:49:27,315 | INFO     | ***************************************
[2025-11-28 03:54:34] 2025-11-28 05:49:27,818 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-28 03:54:34] 2025-11-28 05:49:28,043 | INFO     | sufficient remaining disk space (69573017600 B)
[2025-11-28 03:54:34] 2025-11-28 05:49:28,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 03:54:34] 2025-11-28 05:49:28,044 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 03:54:35] 2025-11-28 05:49:28,044 | INFO     | update_server=False
[2025-11-28 03:54:35] 2025-11-28 05:49:28,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 03:54:35] 2025-11-28 05:49:28,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:54:35] 2025-11-28 05:49:28,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 03:54:35] 2025-11-28 05:49:28,541 | INFO     | aborting loop
[2025-11-28 03:54:35] 2025-11-28 05:49:28,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 03:54:35] 2025-11-28 05:49:29,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 03:54:35] 2025-11-28 05:49:29,050 | INFO     | [job] retrieve thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:29,055 | INFO     | [job] queue monitor thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:29,144 | INFO     | all data control threads have been joined
[2025-11-28 03:54:35] 2025-11-28 05:49:29,356 | INFO     | all payload control threads have been joined
[2025-11-28 03:54:35] 2025-11-28 05:49:29,547 | INFO     | [job] job monitor thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:29,757 | INFO     | all job control threads have been joined
[2025-11-28 03:54:35] 2025-11-28 05:49:29,898 | INFO     | [payload] validate_post thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:29,952 | INFO     | [job] validate thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:29,985 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:29,992 | INFO     | [payload] failed_post thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,011 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,170 | INFO     | [data] control thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,289 | INFO     | [data] copytool_in thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,362 | INFO     | [payload] control thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,558 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,775 | INFO     | [job] control thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:30,948 | INFO     | [data] copytool_out thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:33,094 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 03:54:35] 2025-11-28 05:49:54,027 | INFO     | [monitor] cgroup control has ended
[2025-11-28 03:54:35] 2025-11-28 05:49:55,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567353833280)>', '<ExcThread(monitor, started 140566989874944)>']
[2025-11-28 03:54:35] 2025-11-28 05:49:57,470 | INFO     | PID=3457528 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 03:54:35] 2025-11-28 05:49:57,470 | INFO     | .. there are 34 such processes running
[2025-11-28 03:54:35] 2025-11-28 05:49:57,472 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 03:54:35] 2025-11-28 05:49:57,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 03:54:35] 2025-11-28 05:49:57,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 03:54:35] 2025-11-28 05:49:57,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 03:54:35] 2025-11-28 05:49:57,473 | INFO     | [monitor] control thread has ended
[2025-11-28 03:54:35] 2025-11-28 05:50:00,444 | INFO     | all workflow threads have been joined
[2025-11-28 03:54:35] 2025-11-28 05:50:00,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 03:54:35] 2025-11-28 05:50:00,444 | INFO     | traces error code: 0
[2025-11-28 03:54:35] 2025-11-28 05:50:00,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 03:54:35] 2025-11-28 05:50:02,035 [wrapper] ==== pilot stdout END ====
[2025-11-28 03:54:35] 2025-11-28 05:50:02,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 03:54:35] 2025-11-28 05:50:02,081 [wrapper] pilotpid: 3457528
[2025-11-28 03:54:35] 2025-11-28 05:50:02,097 [wrapper] Pilot exit status: 0
[2025-11-28 03:54:35] 2025-11-28 05:50:02,165 [wrapper] pandaids: 6898120685
[2025-11-28 03:54:35] 2025-11-28 05:50:02,411 [wrapper] cleanup supervisor_pilot 3118324 3457529
[2025-11-28 03:54:35] 2025-11-28 05:50:02,423 [wrapper] Test setup, not cleaning
[2025-11-28 03:54:35] 2025-11-28 05:50:02,451 [wrapper] apfmon messages muted
[2025-11-28 03:54:35] 2025-11-28 05:50:02,468 [wrapper] ==== wrapper stdout END ====
[2025-11-28 03:54:35] 2025-11-28 05:50:02,478 [wrapper] ==== wrapper stderr END ====
[2025-11-28 03:54:35]  *** Error codes and diagnostics ***
[2025-11-28 03:54:35]     "exeErrorCode": 0,
[2025-11-28 03:54:35]     "exeErrorDiag": "",
[2025-11-28 03:54:35]     "pilotErrorCode": 0,
[2025-11-28 03:54:35]     "pilotErrorDiag": "",
[2025-11-28 03:54:35]  *** Listing of results directory ***
[2025-11-28 03:54:35] total 1329692
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:40 queuedata.json
[2025-11-28 03:54:35] -rwx------. 1 boincer umatlas     36292 Nov 25 22:45 runpilot2-wrapper.sh
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 03:54:35] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-28 03:54:35] -rw-r--r--. 2 boincer umatlas 409922195 Nov 27 00:02 EVNT.47483658._002443.pool.root.1
[2025-11-28 03:54:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-28 03:54:35] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-28 03:54:35] -rw-r--r--. 2 boincer umatlas    590099 Nov 27 00:02 input.tar.gz
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:02 pandaJob.out
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-28 03:54:35] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas       533 Nov 28 00:18 boinc_task_state.xml
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas 919799699 Nov 28 00:46 HITS.47556161._004257.pool.root.1
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas      1058 Nov 28 00:48 memory_monitor_summary.json
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas   1516240 Nov 28 00:48 agis_ddmendpoints.agis.ALL.json
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas   2620581 Nov 28 00:48 log.47556161._004257.job.log.tgz.1
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas      8637 Nov 28 00:49 heartbeat.json
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas        95 Nov 28 00:49 pilot_heartbeat.json
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas      4824 Nov 28 00:50 pilotlog.txt
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas  11361389 Nov 28 00:50 log.47556161._004257.job.log.1
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas       353 Nov 28 00:50 output.list
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas       620 Nov 28 00:50 runtime_log
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas  13998080 Nov 28 00:50 result.tar.gz
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas      9348 Nov 28 00:50 runtime_log.err
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas       661 Nov 28 00:50 2j1NDmudLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWsJKDmG3rvon.diag
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas      6845 Nov 28 03:54 init_data.xml
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 03:54 boinc_mmap_file
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas        29 Nov 28 03:54 wrapper_checkpoint.txt
[2025-11-28 03:54:35] -rw-r--r--. 1 boincer umatlas     21811 Nov 28 03:54 stderr.txt
[2025-11-28 03:54:35] HITS file was successfully produced:
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas 919799699 Nov 28 00:46 shared/HITS.pool.root.1
[2025-11-28 03:54:35]  *** Contents of shared directory: ***
[2025-11-28 03:54:35] total 1312836
[2025-11-28 03:54:35] -rw-r--r--. 2 boincer umatlas 409922195 Nov 27 00:02 ATLAS.root_0
[2025-11-28 03:54:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-28 03:54:35] -rw-r--r--. 2 boincer umatlas    590099 Nov 27 00:02 input.tar.gz
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas 919799699 Nov 28 00:46 HITS.pool.root.1
[2025-11-28 03:54:35] -rw-------. 1 boincer umatlas  13998080 Nov 28 00:50 result.tar.gz
03:54:36 (3451478): run_atlas exited; CPU time 254760.630781
03:54:36 (3451478): called boinc_finish(0)

</stderr_txt>
]]>

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