Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:14:53 (30338): wrapper (7.7.26015): starting
23:14:53 (30338): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:14:53] Arguments: --nthreads 8
[2025-11-26 23:14:53] Threads: 8
[2025-11-26 23:14:53] Checking for CVMFS
[2025-11-26 23:14:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:14:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:14:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:14:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:14:54] 2.11.2.0 1598 281949 113552 153345 3 82 19751709 20275200 943 130560 1 265314445 99.981 15740030 13273 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 23:14:54] CVMFS is ok
[2025-11-26 23:14:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:14:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:14:54] Further information can be found at the LHC@home message board.
[2025-11-26 23:14:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:14:54] Checking for apptainer binary...
[2025-11-26 23:14:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:14:54] Running /usr/bin/apptainer --version
[2025-11-26 23:14:54] apptainer version 1.3.2-1.el7
[2025-11-26 23:14:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:14:55] c-205-36.aglt2.org
[2025-11-26 23:14:55] apptainer works
[2025-11-26 23:14:55] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:14:55] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:14:55] Starting ATLAS job with PandaID=6898120574
[2025-11-26 23:14:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:04:07]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:04:07] 2025-11-27 11:03:31,535 | INFO     | time since job start (24504s) is within the limit (172800.0s)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,539 | INFO     | time since job start (24506s) is within the limit (172800.0s)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,627 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 06:04:07] 2025-11-27 11:03:33,629 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2040.7740000000003
[2025-11-27 06:04:07] 2025-11-27 11:03:33,631 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898120574/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,632 | INFO     | extracted standard info from prmon json
[2025-11-27 06:04:07] 2025-11-27 11:03:33,632 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:04:07] 2025-11-27 11:03:33,632 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:04:07] 2025-11-27 11:03:33,637 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:04:07] 2025-11-27 11:03:33,637 | INFO     | sum of square deviations: 20144802878.440323
[2025-11-27 06:04:07] 2025-11-27 11:03:33,640 | INFO     | sum of deviations: 244629513623.55212
[2025-11-27 06:04:07] 2025-11-27 11:03:33,640 | INFO     | mean x: 1764229164.0373135
[2025-11-27 06:04:07] 2025-11-27 11:03:33,640 | INFO     | mean y: 2872539.696517413
[2025-11-27 06:04:07] 2025-11-27 11:03:33,640 | INFO     | intersect: -21421140637.460392
[2025-11-27 06:04:07] 2025-11-27 11:03:33,640 | INFO     | chi2: 4.025665695046267
[2025-11-27 06:04:07] 2025-11-27 11:03:33,641 | INFO     | sum of square deviations: 19402519954.47858
[2025-11-27 06:04:07] 2025-11-27 11:03:33,643 | INFO     | sum of deviations: 354530985455.9066
[2025-11-27 06:04:07] 2025-11-27 11:03:33,643 | INFO     | mean x: 1764229011.5440805
[2025-11-27 06:04:07] 2025-11-27 11:03:33,643 | INFO     | mean y: 2895047.662468514
[2025-11-27 06:04:07] 2025-11-27 11:03:33,643 | INFO     | intersect: -32233837680.874065
[2025-11-27 06:04:07] 2025-11-27 11:03:33,644 | INFO     | chi2: 1.4565026769031395
[2025-11-27 06:04:07] 2025-11-27 11:03:33,644 | INFO     | current chi2=1.4565026769031395 (change=63.81958197136387 %)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,644 | INFO     | sum of square deviations: 18678629842.262726
[2025-11-27 06:04:07] 2025-11-27 11:03:33,646 | INFO     | sum of deviations: 350465272102.3394
[2025-11-27 06:04:07] 2025-11-27 11:03:33,647 | INFO     | mean x: 1764228859.0433674
[2025-11-27 06:04:07] 2025-11-27 11:03:33,647 | INFO     | mean y: 2894181.8035714286
[2025-11-27 06:04:07] 2025-11-27 11:03:33,647 | INFO     | intersect: -33099156255.346306
[2025-11-27 06:04:07] 2025-11-27 11:03:33,647 | INFO     | chi2: 1.4350958865520802
[2025-11-27 06:04:07] 2025-11-27 11:03:33,647 | INFO     | current chi2=1.4350958865520802 (change=1.46973916976075 %)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,647 | INFO     | right removable region: 391
[2025-11-27 06:04:07] 2025-11-27 11:03:33,647 | INFO     | sum of square deviations: 19402412472.56419
[2025-11-27 06:04:07] 2025-11-27 11:03:33,650 | INFO     | sum of deviations: 171656420956.21902
[2025-11-27 06:04:07] 2025-11-27 11:03:33,650 | INFO     | mean x: 1764229316.5415616
[2025-11-27 06:04:07] 2025-11-27 11:03:33,650 | INFO     | mean y: 2887457.2594458438
[2025-11-27 06:04:07] 2025-11-27 11:03:33,650 | INFO     | intersect: -15605547352.163916
[2025-11-27 06:04:07] 2025-11-27 11:03:33,650 | INFO     | chi2: 2.7140463106261845
[2025-11-27 06:04:07] 2025-11-27 11:03:33,650 | INFO     | current chi2=2.7140463106261845 (change=32.581428359391076 %)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,651 | INFO     | sum of square deviations: 18678487529.17324
[2025-11-27 06:04:07] 2025-11-27 11:03:33,653 | INFO     | sum of deviations: 147746401703.48978
[2025-11-27 06:04:07] 2025-11-27 11:03:33,653 | INFO     | mean x: 1764229469.0459185
[2025-11-27 06:04:07] 2025-11-27 11:03:33,653 | INFO     | mean y: 2892490.3061224488
[2025-11-27 06:04:07] 2025-11-27 11:03:33,653 | INFO     | intersect: -13952121555.862219
[2025-11-27 06:04:07] 2025-11-27 11:03:33,654 | INFO     | chi2: 2.669596819078694
[2025-11-27 06:04:07] 2025-11-27 11:03:33,654 | INFO     | current chi2=2.669596819078694 (change=1.6377572988883549 %)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,654 | INFO     | left removable region: 20
[2025-11-27 06:04:07] 2025-11-27 11:03:33,654 | INFO     | sum of square deviations: 15834655445.924513
[2025-11-27 06:04:07] 2025-11-27 11:03:33,656 | INFO     | sum of deviations: 217506751793.01904
[2025-11-27 06:04:07] 2025-11-27 11:03:33,656 | INFO     | mean x: 1764229438.54717
[2025-11-27 06:04:07] 2025-11-27 11:03:33,656 | INFO     | mean y: 2922910.5417789756
[2025-11-27 06:04:07] 2025-11-27 11:03:33,656 | INFO     | intersect: -24230747086.665558
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | chi2: 0.036102477377944794
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | current memory leak: 13.74 B/s (using 371 data points, chi2=0.04)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | could have reported an average CPU frequency of 2425 MHz (17 samples)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | ..............................
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | . Timing measurements:
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | . get job = 0 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | . initial setup = 2 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | . payload setup = 6 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | . stage-in = 0 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | . payload execution = 24465 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,657 | INFO     | . stage-out = 3 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,658 | INFO     | . log creation = 0 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,658 | INFO     | ..............................
[2025-11-27 06:04:07] 2025-11-27 11:03:33,923 | INFO     | 
[2025-11-27 06:04:07] 2025-11-27 11:03:33,923 | INFO     | job summary report
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | --------------------------------------------------
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | PanDA job id: 6898120574
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | task id: 47556161
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | errors: (none)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | pilot state: finished 
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | transexitcode: 0
[2025-11-27 06:04:07] 2025-11-27 11:03:33,924 | INFO     | exeerrorcode: 0
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | exeerrordiag: 
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | exitcode: 0
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | exitmsg: OK
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | cpuconsumptiontime: 191253 s
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | nevents: 1000
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | neventsw: 0
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | pid: 8349
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | pgrp: 8349
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | corecount: 8
[2025-11-27 06:04:07] 2025-11-27 11:03:33,925 | INFO     | event service: False
[2025-11-27 06:04:07] 2025-11-27 11:03:33,926 | INFO     | sizes: {0: 2284093, 1: 2284292, 5: 2284554, 11: 2284610, 24476: 2320941, 24481: 2329935, 24484: 2330119, 24492: 2330429}
[2025-11-27 06:04:07] 2025-11-27 11:03:33,926 | INFO     | --------------------------------------------------
[2025-11-27 06:04:07] 2025-11-27 11:03:33,926 | INFO     | 
[2025-11-27 06:04:07] 2025-11-27 11:03:33,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 06:04:07] 2025-11-27 11:03:33,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:04:07] 2025-11-27 11:03:33,948 | INFO     | job 6898120574 has completed (purged errors)
[2025-11-27 06:04:07] 2025-11-27 11:03:33,949 | INFO     | overall cleanup function is called
[2025-11-27 06:04:07] 2025-11-27 11:03:34,960 | INFO     | --- collectZombieJob: --- 10, [8349]
[2025-11-27 06:04:07] 2025-11-27 11:03:34,960 | INFO     | zombie collector waiting for pid 8349
[2025-11-27 06:04:07] 2025-11-27 11:03:34,961 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:04:07] 2025-11-27 11:03:34,961 | INFO     | collected zombie processes
[2025-11-27 06:04:07] 2025-11-27 11:03:34,961 | INFO     | will attempt to kill all subprocesses of pid=8349
[2025-11-27 06:04:07] 2025-11-27 11:03:35,076 | INFO     | process IDs to be killed: [8349] (in reverse order)
[2025-11-27 06:04:07] 2025-11-27 11:03:35,119 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:04:07] 2025-11-27 11:03:35,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:04:07] 2025-11-27 11:03:35,123 | INFO     | did not find any defunct processes belonging to 8349
[2025-11-27 06:04:07] 2025-11-27 11:03:35,127 | INFO     | did not find any defunct processes belonging to 8349
[2025-11-27 06:04:07] 2025-11-27 11:03:35,129 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:04:07] 2025-11-27 11:03:35,129 | INFO     | ready for new job
[2025-11-27 06:04:07] 2025-11-27 11:03:35,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:04:07] 2025-11-27 11:03:35,133 | INFO     | ***************************************
[2025-11-27 06:04:07] 2025-11-27 11:03:35,133 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:04:07] 2025-11-27 11:03:35,133 | INFO     | ***************************************
[2025-11-27 06:04:07] 2025-11-27 11:03:35,133 | INFO     | 
[2025-11-27 06:04:07] 2025-11-27 11:03:35,134 | INFO     | architecture information:
[2025-11-27 06:04:07] 2025-11-27 11:03:35,135 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:04:07] 2025-11-27 11:03:35,148 | INFO     | cat /etc/os-release:
[2025-11-27 06:04:07] NAME="CentOS Linux"
[2025-11-27 06:04:07] VERSION="7 (Core)"
[2025-11-27 06:04:07] ID="centos"
[2025-11-27 06:04:07] ID_LIKE="rhel fedora"
[2025-11-27 06:04:07] VERSION_ID="7"
[2025-11-27 06:04:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:04:07] ANSI_COLOR="0;31"
[2025-11-27 06:04:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:04:07] HOME_URL="https://www.centos.org/"
[2025-11-27 06:04:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:04:07] 
[2025-11-27 06:04:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:04:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:04:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:04:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:04:07] 
[2025-11-27 06:04:07] 2025-11-27 11:03:35,149 | INFO     | ***************************************
[2025-11-27 06:04:07] 2025-11-27 11:03:35,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 06:04:07] 2025-11-27 11:03:35,669 | INFO     | sufficient remaining disk space (30547116032 B)
[2025-11-27 06:04:07] 2025-11-27 11:03:35,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:04:07] 2025-11-27 11:03:35,670 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:04:07] 2025-11-27 11:03:35,670 | INFO     | update_server=False
[2025-11-27 06:04:07] 2025-11-27 11:03:35,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:04:07] 2025-11-27 11:03:35,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:04:07] 2025-11-27 11:03:35,670 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:04:07] 2025-11-27 11:03:35,671 | INFO     | aborting loop
[2025-11-27 06:04:07] 2025-11-27 11:03:35,854 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:04:07] 2025-11-27 11:03:36,202 | INFO     | all job control threads have been joined
[2025-11-27 06:04:07] 2025-11-27 11:03:36,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:04:07] 2025-11-27 11:03:36,507 | INFO     | all data control threads have been joined
[2025-11-27 06:04:07] 2025-11-27 11:03:36,672 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:36,674 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:36,675 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:36,801 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:36,827 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:36,899 | INFO     | all payload control threads have been joined
[2025-11-27 06:04:07] 2025-11-27 11:03:37,208 | INFO     | [job] control thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,418 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,425 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,513 | INFO     | [data] control thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,849 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,859 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,904 | INFO     | [payload] control thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,917 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:37,917 | INFO     | [job] validate thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:38,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:40,438 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:04:07] 2025-11-27 11:03:47,422 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:04:07] 2025-11-27 11:03:48,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050913326912)>', '<ExcThread(monitor, started 140050486519552)>']
[2025-11-27 06:04:07] 2025-11-27 11:03:53,312 | INFO     | all workflow threads have been joined
[2025-11-27 06:04:07] 2025-11-27 11:03:53,312 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:04:07] 2025-11-27 11:03:53,313 | INFO     | traces error code: 0
[2025-11-27 06:04:07] 2025-11-27 11:03:53,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:04:07] 2025-11-27 11:04:06,794 | INFO     | PID=1817 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 06:04:07] 2025-11-27 11:04:06,795 | INFO     | .. there are 2 such processes running
[2025-11-27 06:04:07] 2025-11-27 11:04:06,795 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:04:07] 2025-11-27 11:04:06,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:04:07] 2025-11-27 11:04:06,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:04:07] 2025-11-27 11:04:06,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:04:07] 2025-11-27 11:04:06,796 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 06:04:07] 2025-11-27 11:04:06,796 | INFO     | [monitor] control thread has ended
[2025-11-27 06:04:07] 2025-11-27 11:04:06,871 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:04:07] 2025-11-27 11:04:06,874 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:04:07] 2025-11-27 11:04:06,878 [wrapper] pilotpid: 1817
[2025-11-27 06:04:07] 2025-11-27 11:04:06,881 [wrapper] Pilot exit status: 0
[2025-11-27 06:04:07] 2025-11-27 11:04:06,891 [wrapper] pandaids: 6898120574
[2025-11-27 06:04:07] 2025-11-27 11:04:06,932 [wrapper] cleanup supervisor_pilot 27050 1818
[2025-11-27 06:04:07] 2025-11-27 11:04:06,936 [wrapper] Test setup, not cleaning
[2025-11-27 06:04:07] 2025-11-27 11:04:06,940 [wrapper] apfmon messages muted
[2025-11-27 06:04:07] 2025-11-27 11:04:06,943 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:04:07] 2025-11-27 11:04:06,947 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:04:07]  *** Error codes and diagnostics ***
[2025-11-27 06:04:07]     "exeErrorCode": 0,
[2025-11-27 06:04:07]     "exeErrorDiag": "",
[2025-11-27 06:04:07]     "pilotErrorCode": 0,
[2025-11-27 06:04:07]     "pilotErrorDiag": "",
[2025-11-27 06:04:07]  *** Listing of results directory ***
[2025-11-27 06:04:07] total 1303804
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 22:36 queuedata.json
[2025-11-27 06:04:07] -rwx------ 1 boincer umatlas     36292 Nov 25 22:39 runpilot2-wrapper.sh
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas       100 Nov 26 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:04:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 23:14 run_atlas
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas       105 Nov 26 23:14 job.xml
[2025-11-27 06:04:07] -rw-r--r-- 2 boincer umatlas 407988381 Nov 26 23:14 EVNT.47483658._002438.pool.root.1
[2025-11-27 06:04:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 23:14 start_atlas.sh
[2025-11-27 06:04:07] drwxrwx--x 2 boincer umatlas      4096 Nov 26 23:14 shared
[2025-11-27 06:04:07] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 23:14 input.tar.gz
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas         0 Nov 26 23:14 boinc_lockfile
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 23:14 pandaJob.out
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas        57 Nov 26 23:14 setup.sh.local
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas    991546 Nov 26 23:15 agis_schedconf.cvmfs.json
[2025-11-27 06:04:07] drwx------ 5 boincer umatlas      4096 Nov 26 23:15 pilot3
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas       532 Nov 27 05:57 boinc_task_state.xml
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas      6137 Nov 27 06:02 init_data.xml
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas 912761047 Nov 27 06:02 HITS.47556161._004207.pool.root.1
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas      1059 Nov 27 06:03 memory_monitor_summary.json
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas   1516240 Nov 27 06:03 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas   1719330 Nov 27 06:03 log.47556161._004207.job.log.tgz.1
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas      8653 Nov 27 06:03 heartbeat.json
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas        29 Nov 27 06:04 wrapper_checkpoint.txt
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas        95 Nov 27 06:04 pilot_heartbeat.json
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas       889 Nov 27 06:04 pilotlog.txt
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas   3494131 Nov 27 06:04 log.47556161._004207.job.log.1
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas       353 Nov 27 06:04 output.list
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas       620 Nov 27 06:04 runtime_log
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas   5232640 Nov 27 06:04 result.tar.gz
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 06:04 runtime_log.err
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas       666 Nov 27 06:04 dDmLDmsYLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmorJKDm4eeqWn.diag
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 06:04 boinc_mmap_file
[2025-11-27 06:04:07] -rw-r--r-- 1 boincer umatlas     21262 Nov 27 06:04 stderr.txt
[2025-11-27 06:04:07] HITS file was successfully produced:
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas 912761047 Nov 27 06:02 shared/HITS.pool.root.1
[2025-11-27 06:04:07]  *** Contents of shared directory: ***
[2025-11-27 06:04:07] total 1295512
[2025-11-27 06:04:07] -rw-r--r-- 2 boincer umatlas 407988381 Nov 26 23:14 ATLAS.root_0
[2025-11-27 06:04:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 23:14 start_atlas.sh
[2025-11-27 06:04:07] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 23:14 input.tar.gz
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas 912761047 Nov 27 06:02 HITS.pool.root.1
[2025-11-27 06:04:07] -rw------- 1 boincer umatlas   5232640 Nov 27 06:04 result.tar.gz
06:04:08 (30338): run_atlas exited; CPU time 190658.512461
06:04:08 (30338): called boinc_finish(0)

</stderr_txt>
]]>

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