Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:42:52 (2273247): wrapper (7.7.26015): starting
04:42:52 (2273247): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 04:42:52] Arguments: --nthreads 3
[2025-11-27 04:42:52] Threads: 3
[2025-11-27 04:42:52] Checking for CVMFS
[2025-11-27 04:42:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:42:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:42:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:42:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:42:53] 2.9.2.0 2210343 13 52284 153345 2 88 35818120 36864001 0 130560 0 187816 100.000 2 15 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 04:42:53] CVMFS is ok
[2025-11-27 04:42:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:42:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:42:53] Further information can be found at the LHC@home message board.
[2025-11-27 04:42:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:42:53] Checking for apptainer binary...
[2025-11-27 04:42:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:42:53] Running /usr/bin/apptainer --version
[2025-11-27 04:42:53] apptainer version 1.4.1-1.1
[2025-11-27 04:42:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:42:53] thA335
[2025-11-27 04:42:53] apptainer works
[2025-11-27 04:42:53] Set ATHENA_PROC_NUMBER=3
[2025-11-27 04:42:53] Set ATHENA_CORE_NUMBER=3
[2025-11-27 04:42:53] Starting ATLAS job with PandaID=6897139686
[2025-11-27 04:42:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:47:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:47:12] 2025-11-27 03:46:19,513 | INFO     | sufficient remaining disk space (827020279808 B)
[2025-11-27 04:47:12] 2025-11-27 03:46:19,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | INFO     | update_server=False
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:47:12] 2025-11-27 03:46:19,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:47:12] 2025-11-27 03:46:19,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:47:12] 2025-11-27 03:46:19,789 | INFO     | aborting loop
[2025-11-27 04:47:12] 2025-11-27 03:46:20,328 | INFO     | all payload control threads have been joined
[2025-11-27 04:47:12] 2025-11-27 03:46:20,429 | INFO     | all data control threads have been joined
[2025-11-27 04:47:12] 2025-11-27 03:46:20,519 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:20,520 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:20,699 | INFO     | all job control threads have been joined
[2025-11-27 04:47:12] 2025-11-27 03:46:20,794 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:20,868 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,084 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,263 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,331 | INFO     | [payload] control thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,347 | INFO     | [job] validate thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,429 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,435 | INFO     | [data] control thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,450 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,480 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,520 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:21,705 | INFO     | [job] control thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:46:23,519 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:47:12] 2025-11-27 03:47:06,104 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:47:12] 2025-11-27 03:47:07,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624377669440)>', '<ExcThread(monitor, started 140623805937408)>']
[2025-11-27 04:47:12] 2025-11-27 03:47:07,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:47:12] 2025-11-27 03:47:07,768 | INFO     | [monitor] control thread has ended
[2025-11-27 04:47:12] 2025-11-27 03:47:12,135 | INFO     | all workflow threads have been joined
[2025-11-27 04:47:12] 2025-11-27 03:47:12,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:47:12] 2025-11-27 03:47:12,136 | INFO     | traces error code: 0
[2025-11-27 04:47:12] 2025-11-27 03:47:12,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:47:12] 2025-11-27 03:47:12,184 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:47:12] 2025-11-27 03:47:12,188 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:47:12] 2025-11-27 03:47:12,191 [wrapper] pilotpid: 2276982
[2025-11-27 04:47:12] 2025-11-27 03:47:12,194 [wrapper] Pilot exit status: 0
[2025-11-27 04:47:12] 2025-11-27 03:47:12,201 [wrapper] pandaids: 6897139686
[2025-11-27 04:47:12] 2025-11-27 03:47:12,218 [wrapper] cleanup supervisor_pilot 2276988 2276983
[2025-11-27 04:47:12] 2025-11-27 03:47:12,220 [wrapper] Test setup, not cleaning
[2025-11-27 04:47:12] 2025-11-27 03:47:12,223 [wrapper] apfmon messages muted
[2025-11-27 04:47:12] 2025-11-27 03:47:12,226 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:47:12] 2025-11-27 03:47:12,229 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:47:12]  *** Error codes and diagnostics ***
[2025-11-27 04:47:12]     "exeErrorCode": 65,
[2025-11-27 04:47:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 04:47:12]     "pilotErrorCode": 1305,
[2025-11-27 04:47:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 04:47:12]  *** Listing of results directory ***
[2025-11-27 04:47:12] total 401920
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:55 queuedata.json
[2025-11-27 04:47:12] -rwx------ 1 boinc boinc     36292 Nov 25 17:56 runpilot2-wrapper.sh
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc       100 Nov 27 04:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:47:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 04:42 run_atlas
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc       105 Nov 27 04:42 job.xml
[2025-11-27 04:47:12] -rw-r--r-- 2 boinc boinc 407379188 Nov 27 04:42 EVNT.47483658._002195.pool.root.1
[2025-11-27 04:47:12] -rw-r--r-- 2 boinc boinc    590110 Nov 27 04:42 input.tar.gz
[2025-11-27 04:47:12] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:42 start_atlas.sh
[2025-11-27 04:47:12] drwxrwx--x 2 boinc boinc      4096 Nov 27 04:42 shared
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:42 boinc_setup_complete
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc      6196 Nov 27 04:42 init_data.xml
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:42 boinc_lockfile
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc      2786 Nov 27 04:42 pandaJob.out
[2025-11-27 04:47:12] -rw------- 1 boinc boinc    991546 Nov 27 04:43 agis_schedconf.cvmfs.json
[2025-11-27 04:47:12] -rw------- 1 boinc boinc   1516240 Nov 27 04:43 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:47:12] drwx------ 5 boinc boinc      4096 Nov 27 04:43 pilot3
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc       523 Nov 27 04:44 boinc_task_state.xml
[2025-11-27 04:47:12] -rw------- 1 boinc boinc       959 Nov 27 04:44 memory_monitor_summary.json
[2025-11-27 04:47:12] -rw------- 1 boinc boinc     55998 Nov 27 04:44 log.47556161._001784.job.log.tgz.1
[2025-11-27 04:47:12] -rw------- 1 boinc boinc        95 Nov 27 04:46 pilot_heartbeat.json
[2025-11-27 04:47:12] -rw------- 1 boinc boinc      8414 Nov 27 04:46 heartbeat.json
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc      8192 Nov 27 04:47 boinc_mmap_file
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc        23 Nov 27 04:47 wrapper_checkpoint.txt
[2025-11-27 04:47:12] -rw------- 1 boinc boinc      4556 Nov 27 04:47 pilotlog.txt
[2025-11-27 04:47:12] -rw------- 1 boinc boinc     93046 Nov 27 04:47 log.47556161._001784.job.log.1
[2025-11-27 04:47:12] -rw------- 1 boinc boinc       186 Nov 27 04:47 output.list
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc       620 Nov 27 04:47 runtime_log
[2025-11-27 04:47:12] -rw------- 1 boinc boinc    163840 Nov 27 04:47 result.tar.gz
[2025-11-27 04:47:12] -rw------- 1 boinc boinc       649 Nov 27 04:47 yMMNDmbWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1XJKDmv2mmNm.diag
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc      8744 Nov 27 04:47 runtime_log.err
[2025-11-27 04:47:12] -rw-r--r-- 1 boinc boinc      8041 Nov 27 04:47 stderr.txt
[2025-11-27 04:47:12] No HITS result produced
[2025-11-27 04:47:12]  *** Contents of shared directory: ***
[2025-11-27 04:47:12] total 398592
[2025-11-27 04:47:12] -rw-r--r-- 2 boinc boinc 407379188 Nov 27 04:42 ATLAS.root_0
[2025-11-27 04:47:12] -rw-r--r-- 2 boinc boinc    590110 Nov 27 04:42 input.tar.gz
[2025-11-27 04:47:12] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:42 start_atlas.sh
[2025-11-27 04:47:12] -rw------- 1 boinc boinc    163840 Nov 27 04:47 result.tar.gz
04:47:13 (2273247): run_atlas exited; CPU time 31.462711
04:47:13 (2273247): called boinc_finish(0)

</stderr_txt>
]]>

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