Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:00:32 (19075): wrapper (7.7.26015): starting
23:00:32 (19075): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:00:32] Arguments: --nthreads 8
[2025-11-26 23:00:32] Threads: 8
[2025-11-26 23:00:32] Checking for CVMFS
[2025-11-26 23:00:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:00:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:00:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:00:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:00:32] 2.11.2.0 2910 48349 83088 153345 3 82 19441912 20275200 1 130560 0 6813092 99.643 3089354 28478 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 23:00:32] CVMFS is ok
[2025-11-26 23:00:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:00:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:00:32] Further information can be found at the LHC@home message board.
[2025-11-26 23:00:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:00:32] Checking for apptainer binary...
[2025-11-26 23:00:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:00:32] Running /usr/bin/apptainer --version
[2025-11-26 23:00:32] apptainer version 1.3.2-1.el7
[2025-11-26 23:00:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:00:34] c-204-13.aglt2.org
[2025-11-26 23:00:34] apptainer works
[2025-11-26 23:00:34] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:00:34] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:00:34] Starting ATLAS job with PandaID=6897139538
[2025-11-26 23:00:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:27:13]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:27:13] 2025-11-27 16:26:05,064 | INFO     | monitor loop #3285: job 0:6897139538 is in state 'finished'
[2025-11-27 11:27:13] 2025-11-27 16:26:05,073 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,169 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 11:27:13] 2025-11-27 16:26:05,173 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-11-27 11:27:13] 2025-11-27 16:26:05,176 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897139538/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,178 | INFO     | extracted standard info from prmon json
[2025-11-27 11:27:13] 2025-11-27 16:26:05,179 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:27:13] 2025-11-27 16:26:05,179 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:27:13] 2025-11-27 16:26:05,193 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:27:13] 2025-11-27 16:26:05,194 | INFO     | sum of square deviations: 122120899729.7433
[2025-11-27 11:27:13] 2025-11-27 16:26:05,205 | INFO     | sum of deviations: 711375354341.3556
[2025-11-27 11:27:13] 2025-11-27 16:26:05,205 | INFO     | mean x: 1764238411.6357436
[2025-11-27 11:27:13] 2025-11-27 16:26:05,205 | INFO     | mean y: 3181874.383356071
[2025-11-27 11:27:13] 2025-11-27 16:26:05,205 | INFO     | intersect: -10273811891.609474
[2025-11-27 11:27:13] 2025-11-27 16:26:05,206 | INFO     | chi2: 6.956247728676242
[2025-11-27 11:27:13] 2025-11-27 16:26:05,207 | INFO     | sum of square deviations: 119638986017.70868
[2025-11-27 11:27:13] 2025-11-27 16:26:05,219 | INFO     | sum of deviations: 1010143818514.7745
[2025-11-27 11:27:13] 2025-11-27 16:26:05,219 | INFO     | mean x: 1764238259.1401098
[2025-11-27 11:27:13] 2025-11-27 16:26:05,219 | INFO     | mean y: 3200233.8159340657
[2025-11-27 11:27:13] 2025-11-27 16:26:05,219 | INFO     | intersect: -14892733200.406431
[2025-11-27 11:27:13] 2025-11-27 16:26:05,220 | INFO     | chi2: 3.230480143710121
[2025-11-27 11:27:13] 2025-11-27 16:26:05,220 | INFO     | current chi2=3.230480143710121 (change=53.56001870961439 %)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,221 | INFO     | sum of square deviations: 117190933405.6458
[2025-11-27 11:27:13] 2025-11-27 16:26:05,232 | INFO     | sum of deviations: 1131691117556.256
[2025-11-27 11:27:13] 2025-11-27 16:26:05,233 | INFO     | mean x: 1764238106.6445367
[2025-11-27 11:27:13] 2025-11-27 16:26:05,233 | INFO     | mean y: 3207798.4951590593
[2025-11-27 11:27:13] 2025-11-27 16:26:05,233 | INFO     | intersect: -17033712520.527592
[2025-11-27 11:27:13] 2025-11-27 16:26:05,234 | INFO     | chi2: 2.468726722334965
[2025-11-27 11:27:13] 2025-11-27 16:26:05,234 | INFO     | current chi2=2.468726722334965 (change=23.580192029916102 %)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,234 | INFO     | right removable region: 722
[2025-11-27 11:27:13] 2025-11-27 16:26:05,235 | INFO     | sum of square deviations: 119638701757.70866
[2025-11-27 11:27:13] 2025-11-27 16:26:05,246 | INFO     | sum of deviations: 488594447911.3376
[2025-11-27 11:27:13] 2025-11-27 16:26:05,246 | INFO     | mean x: 1764238564.1401098
[2025-11-27 11:27:13] 2025-11-27 16:26:05,246 | INFO     | mean y: 3195540.026098901
[2025-11-27 11:27:13] 2025-11-27 16:26:05,247 | INFO     | intersect: -7201807143.60079
[2025-11-27 11:27:13] 2025-11-27 16:26:05,248 | INFO     | chi2: 4.720947748997898
[2025-11-27 11:27:13] 2025-11-27 16:26:05,248 | INFO     | current chi2=4.720947748997898 (change=32.13370292239027 %)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,249 | INFO     | sum of square deviations: 117190453580.21912
[2025-11-27 11:27:13] 2025-11-27 16:26:05,260 | INFO     | sum of deviations: 445397533235.7305
[2025-11-27 11:27:13] 2025-11-27 16:26:05,260 | INFO     | mean x: 1764238716.6417704
[2025-11-27 11:27:13] 2025-11-27 16:26:05,260 | INFO     | mean y: 3198228.929460581
[2025-11-27 11:27:13] 2025-11-27 16:26:05,260 | INFO     | intersect: -6702020058.26941
[2025-11-27 11:27:13] 2025-11-27 16:26:05,261 | INFO     | chi2: 4.682413067119271
[2025-11-27 11:27:13] 2025-11-27 16:26:05,261 | INFO     | current chi2=4.682413067119271 (change=0.8162488535656085 %)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,261 | INFO     | left removable region: 20
[2025-11-27 11:27:13] 2025-11-27 16:26:05,262 | INFO     | sum of square deviations: 107272708578.76378
[2025-11-27 11:27:13] 2025-11-27 16:26:05,273 | INFO     | sum of deviations: 811202536125.1941
[2025-11-27 11:27:13] 2025-11-27 16:26:05,273 | INFO     | mean x: 1764238686.1566951
[2025-11-27 11:27:13] 2025-11-27 16:26:05,273 | INFO     | mean y: 3229717.48005698
[2025-11-27 11:27:13] 2025-11-27 16:26:05,273 | INFO     | intersect: -13338047066.723467
[2025-11-27 11:27:13] 2025-11-27 16:26:05,274 | INFO     | chi2: 0.09663425679446437
[2025-11-27 11:27:13] 2025-11-27 16:26:05,274 | INFO     | current memory leak: 7.56 B/s (using 702 data points, chi2=0.10)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,275 | INFO     | could have reported an average CPU frequency of 2174 MHz (28 samples)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,275 | INFO     | ..............................
[2025-11-27 11:27:13] 2025-11-27 16:26:05,275 | INFO     | . Timing measurements:
[2025-11-27 11:27:13] 2025-11-27 16:26:05,275 | INFO     | . get job = 0 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,276 | INFO     | . initial setup = 2 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,276 | INFO     | . payload setup = 9 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,276 | INFO     | . stage-in = 0 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,276 | INFO     | . payload execution = 44666 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,276 | INFO     | . stage-out = 3 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,276 | INFO     | . log creation = 0 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,276 | INFO     | ..............................
[2025-11-27 11:27:13] 2025-11-27 16:26:05,397 | INFO     | 
[2025-11-27 11:27:13] 2025-11-27 16:26:05,397 | INFO     | job summary report
[2025-11-27 11:27:13] 2025-11-27 16:26:05,397 | INFO     | --------------------------------------------------
[2025-11-27 11:27:13] 2025-11-27 16:26:05,398 | INFO     | PanDA job id: 6897139538
[2025-11-27 11:27:13] 2025-11-27 16:26:05,398 | INFO     | task id: 47556161
[2025-11-27 11:27:13] 2025-11-27 16:26:05,398 | INFO     | errors: (none)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,398 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:27:13] 2025-11-27 16:26:05,398 | INFO     | pilot state: finished 
[2025-11-27 11:27:13] 2025-11-27 16:26:05,399 | INFO     | transexitcode: 0
[2025-11-27 11:27:13] 2025-11-27 16:26:05,399 | INFO     | exeerrorcode: 0
[2025-11-27 11:27:13] 2025-11-27 16:26:05,399 | INFO     | exeerrordiag: 
[2025-11-27 11:27:13] 2025-11-27 16:26:05,399 | INFO     | exitcode: 0
[2025-11-27 11:27:13] 2025-11-27 16:26:05,399 | INFO     | exitmsg: OK
[2025-11-27 11:27:13] 2025-11-27 16:26:05,399 | INFO     | cpuconsumptiontime: 346276 s
[2025-11-27 11:27:13] 2025-11-27 16:26:05,400 | INFO     | nevents: 1000
[2025-11-27 11:27:13] 2025-11-27 16:26:05,400 | INFO     | neventsw: 0
[2025-11-27 11:27:13] 2025-11-27 16:26:05,400 | INFO     | pid: 30026
[2025-11-27 11:27:13] 2025-11-27 16:26:05,400 | INFO     | pgrp: 30026
[2025-11-27 11:27:13] 2025-11-27 16:26:05,400 | INFO     | corecount: 8
[2025-11-27 11:27:13] 2025-11-27 16:26:05,400 | INFO     | event service: False
[2025-11-27 11:27:13] 2025-11-27 16:26:05,400 | INFO     | sizes: {0: 2284265, 6: 2284527, 11: 2284555, 44679: 2330369, 44684: 2339363, 44686: 2339419, 44694: 2339793}
[2025-11-27 11:27:13] 2025-11-27 16:26:05,401 | INFO     | --------------------------------------------------
[2025-11-27 11:27:13] 2025-11-27 16:26:05,401 | INFO     | 
[2025-11-27 11:27:13] 2025-11-27 16:26:05,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 11:27:13] 2025-11-27 16:26:05,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,505 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:27:13] 2025-11-27 16:26:05,505 | INFO     | job 6897139538 has completed (purged errors)
[2025-11-27 11:27:13] 2025-11-27 16:26:05,506 | INFO     | overall cleanup function is called
[2025-11-27 11:27:13] 2025-11-27 16:26:06,520 | INFO     | --- collectZombieJob: --- 10, [30026]
[2025-11-27 11:27:13] 2025-11-27 16:26:06,520 | INFO     | zombie collector waiting for pid 30026
[2025-11-27 11:27:13] 2025-11-27 16:26:06,520 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:27:13] 2025-11-27 16:26:06,521 | INFO     | collected zombie processes
[2025-11-27 11:27:13] 2025-11-27 16:26:06,521 | INFO     | will attempt to kill all subprocesses of pid=30026
[2025-11-27 11:27:13] 2025-11-27 16:26:06,613 | INFO     | process IDs to be killed: [30026] (in reverse order)
[2025-11-27 11:27:13] 2025-11-27 16:26:06,671 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:27:13] 2025-11-27 16:26:06,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:27:13] 2025-11-27 16:26:06,676 | INFO     | did not find any defunct processes belonging to 30026
[2025-11-27 11:27:13] 2025-11-27 16:26:06,680 | INFO     | did not find any defunct processes belonging to 30026
[2025-11-27 11:27:13] 2025-11-27 16:26:06,683 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:27:13] 2025-11-27 16:26:06,683 | INFO     | ready for new job
[2025-11-27 11:27:13] 2025-11-27 16:26:06,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:27:13] 2025-11-27 16:26:06,687 | INFO     | ***************************************
[2025-11-27 11:27:13] 2025-11-27 16:26:06,687 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:27:13] 2025-11-27 16:26:06,687 | INFO     | ***************************************
[2025-11-27 11:27:13] 2025-11-27 16:26:06,687 | INFO     | 
[2025-11-27 11:27:13] 2025-11-27 16:26:06,688 | INFO     | architecture information:
[2025-11-27 11:27:13] 2025-11-27 16:26:06,689 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:27:13] 2025-11-27 16:26:06,708 | INFO     | cat /etc/os-release:
[2025-11-27 11:27:13] NAME="CentOS Linux"
[2025-11-27 11:27:13] VERSION="7 (Core)"
[2025-11-27 11:27:13] ID="centos"
[2025-11-27 11:27:13] ID_LIKE="rhel fedora"
[2025-11-27 11:27:13] VERSION_ID="7"
[2025-11-27 11:27:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:27:13] ANSI_COLOR="0;31"
[2025-11-27 11:27:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:27:13] HOME_URL="https://www.centos.org/"
[2025-11-27 11:27:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:27:13] 
[2025-11-27 11:27:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:27:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:27:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:27:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:27:13] 
[2025-11-27 11:27:13] 2025-11-27 16:26:06,709 | INFO     | ***************************************
[2025-11-27 11:27:13] 2025-11-27 16:26:07,212 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 11:27:13] 2025-11-27 16:26:07,235 | INFO     | sufficient remaining disk space (17451450368 B)
[2025-11-27 11:27:13] 2025-11-27 16:26:07,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:27:13] 2025-11-27 16:26:07,236 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:27:13] 2025-11-27 16:26:07,236 | INFO     | update_server=False
[2025-11-27 11:27:13] 2025-11-27 16:26:07,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:27:13] 2025-11-27 16:26:07,237 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:27:13] 2025-11-27 16:26:07,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:27:13] 2025-11-27 16:26:07,576 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 11:27:13] 2025-11-27 16:26:07,576 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 11:27:13] 2025-11-27 16:26:07,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:27:13] 2025-11-27 16:26:07,577 | INFO     | will abort loop
[2025-11-27 11:27:13] 2025-11-27 16:26:07,640 | INFO     | all data control threads have been joined
[2025-11-27 11:27:13] 2025-11-27 16:26:08,133 | INFO     | all payload control threads have been joined
[2025-11-27 11:27:13] 2025-11-27 16:26:08,242 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,243 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:27:13] 2025-11-27 16:26:08,479 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,529 | INFO     | all job control threads have been joined
[2025-11-27 11:27:13] 2025-11-27 16:26:08,582 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,646 | INFO     | [data] control thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,752 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,755 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,908 | INFO     | [job] validate thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:08,985 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:09,044 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:09,138 | INFO     | [payload] control thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:09,279 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:09,534 | INFO     | [job] control thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:10,423 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:11,244 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:27:13] 2025-11-27 16:26:36,716 | INFO     | PID=22752 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 11:27:13] 2025-11-27 16:26:36,717 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:27:13] 2025-11-27 16:26:36,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:27:13] 2025-11-27 16:26:36,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:27:13] 2025-11-27 16:27:07,182 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:27:13] 2025-11-27 16:27:08,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643306481472)>', '<ExcThread(monitor, started 140642193766144)>']
[2025-11-27 11:27:13] 2025-11-27 16:27:08,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:27:13] 2025-11-27 16:27:08,881 | INFO     | [monitor] control thread has ended
[2025-11-27 11:27:13] 2025-11-27 16:27:13,381 | INFO     | all workflow threads have been joined
[2025-11-27 11:27:13] 2025-11-27 16:27:13,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:27:13] 2025-11-27 16:27:13,382 | INFO     | traces error code: 0
[2025-11-27 11:27:13] 2025-11-27 16:27:13,382 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:27:13] 2025-11-27 16:27:13,506 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:27:13] 2025-11-27 16:27:13,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:27:13] 2025-11-27 16:27:13,516 [wrapper] pilotpid: 22752
[2025-11-27 11:27:13] 2025-11-27 16:27:13,521 [wrapper] Pilot exit status: 0
[2025-11-27 11:27:13] 2025-11-27 16:27:13,536 [wrapper] pandaids: 6897139538
[2025-11-27 11:27:13] 2025-11-27 16:27:13,594 [wrapper] cleanup supervisor_pilot 31239 22753
[2025-11-27 11:27:13] 2025-11-27 16:27:13,599 [wrapper] Test setup, not cleaning
[2025-11-27 11:27:13] 2025-11-27 16:27:13,605 [wrapper] apfmon messages muted
[2025-11-27 11:27:13] 2025-11-27 16:27:13,610 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:27:13] 2025-11-27 16:27:13,615 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:27:13]  *** Error codes and diagnostics ***
[2025-11-27 11:27:13]     "exeErrorCode": 0,
[2025-11-27 11:27:13]     "exeErrorDiag": "",
[2025-11-27 11:27:13]     "pilotErrorCode": 0,
[2025-11-27 11:27:13]     "pilotErrorDiag": "",
[2025-11-27 11:27:13]  *** Listing of results directory ***
[2025-11-27 11:27:13] total 1327156
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 11:27:13] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas       100 Nov 26 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:27:13] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 23:00 run_atlas
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas       105 Nov 26 23:00 job.xml
[2025-11-27 11:27:13] -rw-r--r-- 2 boincer umatlas 410931805 Nov 26 23:00 EVNT.47483658._002184.pool.root.1
[2025-11-27 11:27:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 23:00 start_atlas.sh
[2025-11-27 11:27:13] drwxrwx--x 2 boincer umatlas      4096 Nov 26 23:00 shared
[2025-11-27 11:27:13] -rw-r--r-- 2 boincer umatlas    590110 Nov 26 23:00 input.tar.gz
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas         0 Nov 26 23:00 boinc_lockfile
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 23:00 pandaJob.out
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas        57 Nov 26 23:00 setup.sh.local
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas    991546 Nov 26 23:00 agis_schedconf.cvmfs.json
[2025-11-27 11:27:13] drwx------ 5 boincer umatlas      4096 Nov 26 23:00 pilot3
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas       533 Nov 27 11:14 boinc_task_state.xml
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 11:22 init_data.xml
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas 927890378 Nov 27 11:25 HITS.47556161._001675.pool.root.1
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas      1061 Nov 27 11:25 memory_monitor_summary.json
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas   1516240 Nov 27 11:25 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas   1979959 Nov 27 11:25 log.47556161._001675.job.log.tgz.1
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas      8659 Nov 27 11:26 heartbeat.json
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas        95 Nov 27 11:26 pilot_heartbeat.json
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 11:26 boinc_mmap_file
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas        29 Nov 27 11:26 wrapper_checkpoint.txt
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas      4932 Nov 27 11:27 pilotlog.txt
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas   6150732 Nov 27 11:27 log.47556161._001675.job.log.1
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas       353 Nov 27 11:27 output.list
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas       620 Nov 27 11:27 runtime_log
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas   8151040 Nov 27 11:27 result.tar.gz
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas       668 Nov 27 11:27 U3BMDmSWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRWJKDmS4Ahrm.diag
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 11:27 runtime_log.err
[2025-11-27 11:27:13] -rw-r--r-- 1 boincer umatlas     21284 Nov 27 11:27 stderr.txt
[2025-11-27 11:27:13] HITS file was successfully produced:
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas 927890378 Nov 27 11:25 shared/HITS.pool.root.1
[2025-11-27 11:27:13]  *** Contents of shared directory: ***
[2025-11-27 11:27:13] total 1316012
[2025-11-27 11:27:13] -rw-r--r-- 2 boincer umatlas 410931805 Nov 26 23:00 ATLAS.root_0
[2025-11-27 11:27:13] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 23:00 start_atlas.sh
[2025-11-27 11:27:13] -rw-r--r-- 2 boincer umatlas    590110 Nov 26 23:00 input.tar.gz
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas 927890378 Nov 27 11:25 HITS.pool.root.1
[2025-11-27 11:27:13] -rw------- 1 boincer umatlas   8151040 Nov 27 11:27 result.tar.gz
11:27:15 (19075): run_atlas exited; CPU time 344090.079833
11:27:15 (19075): called boinc_finish(0)

</stderr_txt>
]]>

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