Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:28:28 (19989): wrapper (7.7.26015): starting
22:28:28 (19989): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 22:28:28] Arguments: --nthreads 12
[2025-11-26 22:28:28] Threads: 12
[2025-11-26 22:28:28] Checking for CVMFS
[2025-11-26 22:28:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:28:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:28:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:28:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:28:28] 2.11.2.0 25590 189263 92220 153345 2 82 19224208 20275201 1 130560 2 99509452 99.967 7516539 25780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 22:28:28] CVMFS is ok
[2025-11-26 22:28:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:28:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:28:28] Further information can be found at the LHC@home message board.
[2025-11-26 22:28:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:28:28] Checking for apptainer binary...
[2025-11-26 22:28:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:28:28] Running /usr/bin/apptainer --version
[2025-11-26 22:28:28] apptainer version 1.3.2-1.el7
[2025-11-26 22:28:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:28:29] c-205-24.aglt2.org
[2025-11-26 22:28:29] apptainer works
[2025-11-26 22:28:29] Set ATHENA_PROC_NUMBER=12
[2025-11-26 22:28:29] Set ATHENA_CORE_NUMBER=12
[2025-11-26 22:28:29] Starting ATLAS job with PandaID=6892526949
[2025-11-26 22:28:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:35:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:35:33] 2025-11-27 10:34:45,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:35:33] 2025-11-27 10:34:47,356 | INFO     | time since job start (25562s) is within the limit (172800.0s)
[2025-11-27 05:35:33] 2025-11-27 10:34:47,868 | INFO     | monitor loop #1916: job 0:6892526949 is in state 'finished'
[2025-11-27 05:35:33] 2025-11-27 10:34:47,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,469 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 05:35:33] 2025-11-27 10:34:48,473 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-27 05:35:33] 2025-11-27 10:34:48,476 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892526949/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,476 | INFO     | extracted standard info from prmon json
[2025-11-27 05:35:33] 2025-11-27 10:34:48,477 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:35:33] 2025-11-27 10:34:48,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:35:33] 2025-11-27 10:34:48,484 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:35:33] 2025-11-27 10:34:48,484 | INFO     | sum of square deviations: 22809846471.436802
[2025-11-27 05:35:33] 2025-11-27 10:34:48,488 | INFO     | sum of deviations: 356229989938.3292
[2025-11-27 05:35:33] 2025-11-27 10:34:48,488 | INFO     | mean x: 1764226903.274463
[2025-11-27 05:35:33] 2025-11-27 10:34:48,488 | INFO     | mean y: 3427210.797136038
[2025-11-27 05:35:33] 2025-11-27 10:34:48,489 | INFO     | intersect: -27549170865.186497
[2025-11-27 05:35:33] 2025-11-27 10:34:48,489 | INFO     | chi2: 6.294539192234058
[2025-11-27 05:35:33] 2025-11-27 10:34:48,490 | INFO     | sum of square deviations: 22003010603.55567
[2025-11-27 05:35:33] 2025-11-27 10:34:48,493 | INFO     | sum of deviations: 529330290253.22174
[2025-11-27 05:35:33] 2025-11-27 10:34:48,494 | INFO     | mean x: 1764226750.7777777
[2025-11-27 05:35:33] 2025-11-27 10:34:48,494 | INFO     | mean y: 3459897.393719807
[2025-11-27 05:35:33] 2025-11-27 10:34:48,494 | INFO     | intersect: -42438852879.149155
[2025-11-27 05:35:33] 2025-11-27 10:34:48,494 | INFO     | chi2: 2.8370469260630147
[2025-11-27 05:35:33] 2025-11-27 10:34:48,494 | INFO     | current chi2=2.8370469260630147 (change=54.92844131365096 %)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,495 | INFO     | sum of square deviations: 21215405900.225014
[2025-11-27 05:35:33] 2025-11-27 10:34:48,498 | INFO     | sum of deviations: 533339858323.05615
[2025-11-27 05:35:33] 2025-11-27 10:34:48,499 | INFO     | mean x: 1764226598.2787287
[2025-11-27 05:35:33] 2025-11-27 10:34:48,499 | INFO     | mean y: 3460649.5696821515
[2025-11-27 05:35:33] 2025-11-27 10:34:48,499 | INFO     | intersect: -44347911574.97799
[2025-11-27 05:35:33] 2025-11-27 10:34:48,499 | INFO     | chi2: 2.76240391494491
[2025-11-27 05:35:33] 2025-11-27 10:34:48,499 | INFO     | current chi2=2.76240391494491 (change=2.6310108032540436 %)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,500 | INFO     | right removable region: 408
[2025-11-27 05:35:33] 2025-11-27 10:34:48,500 | INFO     | sum of square deviations: 22002940453.555668
[2025-11-27 05:35:33] 2025-11-27 10:34:48,504 | INFO     | sum of deviations: 207145278630.88855
[2025-11-27 05:35:33] 2025-11-27 10:34:48,504 | INFO     | mean x: 1764227055.7777777
[2025-11-27 05:35:33] 2025-11-27 10:34:48,504 | INFO     | mean y: 3455316.031400966
[2025-11-27 05:35:33] 2025-11-27 10:34:48,504 | INFO     | intersect: -16605747704.294144
[2025-11-27 05:35:33] 2025-11-27 10:34:48,505 | INFO     | chi2: 3.6934440482938333
[2025-11-27 05:35:33] 2025-11-27 10:34:48,505 | INFO     | current chi2=3.6934440482938333 (change=41.3230431093248 %)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,505 | INFO     | sum of square deviations: 21215290610.66534
[2025-11-27 05:35:33] 2025-11-27 10:34:48,509 | INFO     | sum of deviations: 174961861838.95822
[2025-11-27 05:35:33] 2025-11-27 10:34:48,509 | INFO     | mean x: 1764227208.2811737
[2025-11-27 05:35:33] 2025-11-27 10:34:48,509 | INFO     | mean y: 3461539.6699266504
[2025-11-27 05:35:33] 2025-11-27 10:34:48,509 | INFO     | intersect: -14546067040.091597
[2025-11-27 05:35:33] 2025-11-27 10:34:48,510 | INFO     | chi2: 3.6371609939805625
[2025-11-27 05:35:33] 2025-11-27 10:34:48,510 | INFO     | current chi2=3.6371609939805625 (change=1.523863731989402 %)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,510 | INFO     | left removable region: 20
[2025-11-27 05:35:33] 2025-11-27 10:34:48,510 | INFO     | sum of square deviations: 18112393846.37884
[2025-11-27 05:35:33] 2025-11-27 10:34:48,514 | INFO     | sum of deviations: 311969873343.18567
[2025-11-27 05:35:33] 2025-11-27 10:34:48,514 | INFO     | mean x: 1764227177.780928
[2025-11-27 05:35:33] 2025-11-27 10:34:48,514 | INFO     | mean y: 3504293.4845360825
[2025-11-27 05:35:33] 2025-11-27 10:34:48,514 | INFO     | intersect: -30383739594.266888
[2025-11-27 05:35:33] 2025-11-27 10:34:48,514 | INFO     | chi2: 0.027986655888320944
[2025-11-27 05:35:33] 2025-11-27 10:34:48,515 | INFO     | current memory leak: 17.22 B/s (using 388 data points, chi2=0.03)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,515 | INFO     | could have reported an average CPU frequency of 2342 MHz (18 samples)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,515 | INFO     | ..............................
[2025-11-27 05:35:33] 2025-11-27 10:34:48,515 | INFO     | . Timing measurements:
[2025-11-27 05:35:33] 2025-11-27 10:34:48,515 | INFO     | . get job = 0 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,516 | INFO     | . initial setup = 2 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,516 | INFO     | . payload setup = 7 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,516 | INFO     | . stage-in = 0 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,516 | INFO     | . payload execution = 25523 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,516 | INFO     | . stage-out = 3 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,516 | INFO     | . log creation = 0 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,516 | INFO     | ..............................
[2025-11-27 05:35:33] 2025-11-27 10:34:48,673 | INFO     | 
[2025-11-27 05:35:33] 2025-11-27 10:34:48,673 | INFO     | job summary report
[2025-11-27 05:35:33] 2025-11-27 10:34:48,673 | INFO     | --------------------------------------------------
[2025-11-27 05:35:33] 2025-11-27 10:34:48,673 | INFO     | PanDA job id: 6892526949
[2025-11-27 05:35:33] 2025-11-27 10:34:48,673 | INFO     | task id: 47493029
[2025-11-27 05:35:33] 2025-11-27 10:34:48,674 | INFO     | errors: (none)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:35:33] 2025-11-27 10:34:48,674 | INFO     | pilot state: finished 
[2025-11-27 05:35:33] 2025-11-27 10:34:48,674 | INFO     | transexitcode: 0
[2025-11-27 05:35:33] 2025-11-27 10:34:48,674 | INFO     | exeerrorcode: 0
[2025-11-27 05:35:33] 2025-11-27 10:34:48,674 | INFO     | exeerrordiag: 
[2025-11-27 05:35:33] 2025-11-27 10:34:48,675 | INFO     | exitcode: 0
[2025-11-27 05:35:33] 2025-11-27 10:34:48,675 | INFO     | exitmsg: OK
[2025-11-27 05:35:33] 2025-11-27 10:34:48,675 | INFO     | cpuconsumptiontime: 294256 s
[2025-11-27 05:35:33] 2025-11-27 10:34:48,675 | INFO     | nevents: 1000
[2025-11-27 05:35:33] 2025-11-27 10:34:48,675 | INFO     | neventsw: 0
[2025-11-27 05:35:33] 2025-11-27 10:34:48,675 | INFO     | pid: 30095
[2025-11-27 05:35:33] 2025-11-27 10:34:48,676 | INFO     | pgrp: 30095
[2025-11-27 05:35:33] 2025-11-27 10:34:48,676 | INFO     | corecount: 12
[2025-11-27 05:35:33] 2025-11-27 10:34:48,676 | INFO     | event service: False
[2025-11-27 05:35:33] 2025-11-27 10:34:48,676 | INFO     | sizes: {0: 2283476, 1: 2284332, 6: 2284594, 12: 2284622, 25534: 2321764, 25538: 2330758, 25542: 2330942, 25547: 2331188}
[2025-11-27 05:35:33] 2025-11-27 10:34:48,676 | INFO     | --------------------------------------------------
[2025-11-27 05:35:33] 2025-11-27 10:34:48,676 | INFO     | 
[2025-11-27 05:35:33] 2025-11-27 10:34:48,677 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:35:33] 2025-11-27 10:34:48,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,710 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,710 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:35:33] 2025-11-27 10:34:48,711 | INFO     | job 6892526949 has completed (purged errors)
[2025-11-27 05:35:33] 2025-11-27 10:34:48,711 | INFO     | overall cleanup function is called
[2025-11-27 05:35:33] 2025-11-27 10:34:49,728 | INFO     | --- collectZombieJob: --- 10, [30095]
[2025-11-27 05:35:33] 2025-11-27 10:34:49,728 | INFO     | zombie collector waiting for pid 30095
[2025-11-27 05:35:33] 2025-11-27 10:34:49,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:35:33] 2025-11-27 10:34:49,728 | INFO     | collected zombie processes
[2025-11-27 05:35:33] 2025-11-27 10:34:49,728 | INFO     | will attempt to kill all subprocesses of pid=30095
[2025-11-27 05:35:33] 2025-11-27 10:34:49,822 | INFO     | process IDs to be killed: [30095] (in reverse order)
[2025-11-27 05:35:33] 2025-11-27 10:34:49,873 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:35:33] 2025-11-27 10:34:49,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:35:33] 2025-11-27 10:34:49,877 | INFO     | did not find any defunct processes belonging to 30095
[2025-11-27 05:35:33] 2025-11-27 10:34:49,880 | INFO     | did not find any defunct processes belonging to 30095
[2025-11-27 05:35:33] 2025-11-27 10:34:49,882 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:35:33] 2025-11-27 10:34:49,882 | INFO     | ready for new job
[2025-11-27 05:35:33] 2025-11-27 10:34:49,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:35:33] 2025-11-27 10:34:49,885 | INFO     | ***************************************
[2025-11-27 05:35:33] 2025-11-27 10:34:49,885 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:35:33] 2025-11-27 10:34:49,885 | INFO     | ***************************************
[2025-11-27 05:35:33] 2025-11-27 10:34:49,885 | INFO     | 
[2025-11-27 05:35:33] 2025-11-27 10:34:49,886 | INFO     | architecture information:
[2025-11-27 05:35:33] 2025-11-27 10:34:49,886 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:35:33] 2025-11-27 10:34:49,903 | INFO     | cat /etc/os-release:
[2025-11-27 05:35:33] NAME="CentOS Linux"
[2025-11-27 05:35:33] VERSION="7 (Core)"
[2025-11-27 05:35:33] ID="centos"
[2025-11-27 05:35:33] ID_LIKE="rhel fedora"
[2025-11-27 05:35:33] VERSION_ID="7"
[2025-11-27 05:35:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:35:33] ANSI_COLOR="0;31"
[2025-11-27 05:35:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:35:33] HOME_URL="https://www.centos.org/"
[2025-11-27 05:35:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:35:33] 
[2025-11-27 05:35:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:35:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:35:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:35:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:35:33] 
[2025-11-27 05:35:33] 2025-11-27 10:34:49,904 | INFO     | ***************************************
[2025-11-27 05:35:33] 2025-11-27 10:34:50,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:35:33] 2025-11-27 10:34:50,425 | INFO     | sufficient remaining disk space (28255977472 B)
[2025-11-27 05:35:33] 2025-11-27 10:34:50,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:35:33] 2025-11-27 10:34:50,426 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:35:33] 2025-11-27 10:34:50,426 | INFO     | update_server=False
[2025-11-27 05:35:33] 2025-11-27 10:34:50,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:35:33] 2025-11-27 10:34:50,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:35:33] 2025-11-27 10:34:50,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:35:33] 2025-11-27 10:34:50,703 | INFO     | all payload control threads have been joined
[2025-11-27 05:35:33] 2025-11-27 10:34:50,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:35:33] 2025-11-27 10:34:51,201 | INFO     | all data control threads have been joined
[2025-11-27 05:35:33] 2025-11-27 10:34:51,213 | INFO     | all job control threads have been joined
[2025-11-27 05:35:33] 2025-11-27 10:34:51,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:35:33] 2025-11-27 10:34:51,376 | INFO     | aborting loop
[2025-11-27 05:35:33] 2025-11-27 10:34:51,432 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:51,432 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:51,680 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:51,709 | INFO     | [payload] control thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:51,710 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:51,791 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,207 | INFO     | [data] control thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,219 | INFO     | [job] control thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,381 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,464 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,526 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,666 | INFO     | [job] validate thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,810 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:52,847 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:34:54,433 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:35:33] 2025-11-27 10:35:20,556 | INFO     | PID=23670 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 05:35:33] 2025-11-27 10:35:20,556 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:35:33] 2025-11-27 10:35:20,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:35:33] 2025-11-27 10:35:20,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:35:33] 2025-11-27 10:35:26,650 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:35:33] 2025-11-27 10:35:27,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886778652480)>', '<ExcThread(monitor, started 139886162056960)>']
[2025-11-27 05:35:33] 2025-11-27 10:35:28,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:35:33] 2025-11-27 10:35:28,597 | INFO     | [monitor] control thread has ended
[2025-11-27 05:35:33] 2025-11-27 10:35:32,871 | INFO     | all workflow threads have been joined
[2025-11-27 05:35:33] 2025-11-27 10:35:32,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:35:33] 2025-11-27 10:35:32,872 | INFO     | traces error code: 0
[2025-11-27 05:35:33] 2025-11-27 10:35:32,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:35:33] 2025-11-27 10:35:32,968 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:35:33] 2025-11-27 10:35:32,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:35:33] 2025-11-27 10:35:32,976 [wrapper] pilotpid: 23670
[2025-11-27 05:35:33] 2025-11-27 10:35:32,980 [wrapper] Pilot exit status: 0
[2025-11-27 05:35:33] 2025-11-27 10:35:32,995 [wrapper] pandaids: 6892526949
[2025-11-27 05:35:33] 2025-11-27 10:35:33,042 [wrapper] cleanup supervisor_pilot 28115 23671
[2025-11-27 05:35:33] 2025-11-27 10:35:33,046 [wrapper] Test setup, not cleaning
[2025-11-27 05:35:33] 2025-11-27 10:35:33,050 [wrapper] apfmon messages muted
[2025-11-27 05:35:33] 2025-11-27 10:35:33,053 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:35:33] 2025-11-27 10:35:33,057 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:35:33]  *** Error codes and diagnostics ***
[2025-11-27 05:35:33]     "exeErrorCode": 0,
[2025-11-27 05:35:33]     "exeErrorDiag": "",
[2025-11-27 05:35:33]     "pilotErrorCode": 0,
[2025-11-27 05:35:33]     "pilotErrorDiag": "",
[2025-11-27 05:35:33]  *** Listing of results directory ***
[2025-11-27 05:35:33] total 1300816
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:10 queuedata.json
[2025-11-27 05:35:33] -rwx------ 1 boincer umatlas     36292 Nov 19 02:10 runpilot2-wrapper.sh
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas       100 Nov 26 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:35:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 22:28 run_atlas
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas       105 Nov 26 22:28 job.xml
[2025-11-27 05:35:33] -rw-r--r-- 2 boincer umatlas 410372637 Nov 26 22:28 EVNT.47493027._000119.pool.root.1
[2025-11-27 05:35:33] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 22:28 start_atlas.sh
[2025-11-27 05:35:33] drwxrwx--x 2 boincer umatlas      4096 Nov 26 22:28 shared
[2025-11-27 05:35:33] -rw-r--r-- 2 boincer umatlas    590090 Nov 26 22:28 input.tar.gz
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas         0 Nov 26 22:28 boinc_lockfile
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 22:28 pandaJob.out
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas    991546 Nov 26 22:28 agis_schedconf.cvmfs.json
[2025-11-27 05:35:33] drwx------ 5 boincer umatlas      4096 Nov 26 22:28 pilot3
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas       533 Nov 27 05:26 boinc_task_state.xml
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 05:31 init_data.xml
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas 906258212 Nov 27 05:34 HITS.47493029._001150.pool.root.1
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas      1063 Nov 27 05:34 memory_monitor_summary.json
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas   1516240 Nov 27 05:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas   2166347 Nov 27 05:34 log.47493029._001150.job.log.tgz.1
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas        95 Nov 27 05:34 pilot_heartbeat.json
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas      8666 Nov 27 05:34 heartbeat.json
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 05:35 boinc_mmap_file
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas        29 Nov 27 05:35 wrapper_checkpoint.txt
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas      4746 Nov 27 05:35 pilotlog.txt
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas   3577971 Nov 27 05:35 log.47493029._001150.job.log.1
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas       353 Nov 27 05:35 output.list
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas       620 Nov 27 05:35 runtime_log
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas   5765120 Nov 27 05:35 result.tar.gz
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas      8706 Nov 27 05:35 runtime_log.err
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas       670 Nov 27 05:35 31sKDmIWrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPjGKDmnHM29n.diag
[2025-11-27 05:35:33] -rw-r--r-- 1 boincer umatlas     21357 Nov 27 05:35 stderr.txt
[2025-11-27 05:35:33] HITS file was successfully produced:
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas 906258212 Nov 27 05:34 shared/HITS.pool.root.1
[2025-11-27 05:35:33]  *** Contents of shared directory: ***
[2025-11-27 05:35:33] total 1292008
[2025-11-27 05:35:33] -rw-r--r-- 2 boincer umatlas 410372637 Nov 26 22:28 ATLAS.root_0
[2025-11-27 05:35:33] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 22:28 start_atlas.sh
[2025-11-27 05:35:33] -rw-r--r-- 2 boincer umatlas    590090 Nov 26 22:28 input.tar.gz
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas 906258212 Nov 27 05:34 HITS.pool.root.1
[2025-11-27 05:35:33] -rw------- 1 boincer umatlas   5765120 Nov 27 05:35 result.tar.gz
05:35:34 (19989): run_atlas exited; CPU time 287582.740669
05:35:34 (19989): called boinc_finish(0)

</stderr_txt>
]]>

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