Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:47:43 (3072130): wrapper (7.7.26015): starting
23:47:43 (3072130): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:47:43] Arguments: --nthreads 8
[2025-11-26 23:47:43] Threads: 8
[2025-11-26 23:47:43] Checking for CVMFS
[2025-11-26 23:47:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:47:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:47:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:47:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:47:43] 2.13.2.0 3460 3525 60364 153350 3 81 3317802 4096000 3288 130560 0 8295603 99.801 1362101 893 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 23:47:43] CVMFS is ok
[2025-11-26 23:47:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:47:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 23:47:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 23:47:43] Further information can be found at the LHC@home message board.
[2025-11-26 23:47:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:47:43] Checking for apptainer binary...
[2025-11-26 23:47:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:47:43] Running /usr/bin/apptainer --version
[2025-11-26 23:47:43] apptainer version 1.4.3
[2025-11-26 23:47:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:47:43] painter
[2025-11-26 23:47:43] apptainer works
[2025-11-26 23:47:43] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:47:43] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:47:43] Starting ATLAS job with PandaID=6898041254
[2025-11-26 23:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:56:40]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:56:40] 2025-11-27 10:56:07,174 | INFO     | time since job start (14897s) is within the limit (172800.0s)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,743 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 03:56:40] 2025-11-27 10:56:07,745 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4785.440499999999
[2025-11-27 03:56:40] 2025-11-27 10:56:07,748 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6898041254/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,748 | INFO     | extracted standard info from prmon json
[2025-11-27 03:56:40] 2025-11-27 10:56:07,748 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:56:40] 2025-11-27 10:56:07,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:56:40] 2025-11-27 10:56:07,750 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:56:40] 2025-11-27 10:56:07,751 | INFO     | sum of square deviations: 4504513180.438557
[2025-11-27 03:56:40] 2025-11-27 10:56:07,751 | INFO     | sum of deviations: 121788858939.32773
[2025-11-27 03:56:40] 2025-11-27 10:56:07,751 | INFO     | mean x: 1764233502.602459
[2025-11-27 03:56:40] 2025-11-27 10:56:07,751 | INFO     | mean y: 2835804.7868852457
[2025-11-27 03:56:40] 2025-11-27 10:56:07,752 | INFO     | intersect: -47696877033.786255
[2025-11-27 03:56:40] 2025-11-27 10:56:07,752 | INFO     | chi2: 3.798076893031406
[2025-11-27 03:56:40] 2025-11-27 10:56:07,752 | INFO     | sum of square deviations: 4233241300.384926
[2025-11-27 03:56:40] 2025-11-27 10:56:07,753 | INFO     | sum of deviations: 163513061377.8285
[2025-11-27 03:56:40] 2025-11-27 10:56:07,753 | INFO     | mean x: 1764233350.1046026
[2025-11-27 03:56:40] 2025-11-27 10:56:07,753 | INFO     | mean y: 2859061.246861925
[2025-11-27 03:56:40] 2025-11-27 10:56:07,753 | INFO     | intersect: -68142369521.45524
[2025-11-27 03:56:40] 2025-11-27 10:56:07,753 | INFO     | chi2: 2.435405380239802
[2025-11-27 03:56:40] 2025-11-27 10:56:07,753 | INFO     | current chi2=2.435405380239802 (change=35.87793378516879 %)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,753 | INFO     | sum of square deviations: 3973041924.43161
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | sum of deviations: 157714554188.90176
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | mean x: 1764233197.594017
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | mean y: 2855662.0726495725
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | intersect: -70030448173.15111
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | chi2: 2.433603945000319
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | current chi2=2.433603945000319 (change=0.07396859898969609 %)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | right removable region: 233
[2025-11-27 03:56:40] 2025-11-27 10:56:07,754 | INFO     | sum of square deviations: 4233226050.384926
[2025-11-27 03:56:40] 2025-11-27 10:56:07,755 | INFO     | sum of deviations: 54390844436.895386
[2025-11-27 03:56:40] 2025-11-27 10:56:07,755 | INFO     | mean x: 1764233655.1046026
[2025-11-27 03:56:40] 2025-11-27 10:56:07,755 | INFO     | mean y: 2873519.0041841003
[2025-11-27 03:56:40] 2025-11-27 10:56:07,755 | INFO     | intersect: -22664982424.196472
[2025-11-27 03:56:40] 2025-11-27 10:56:07,755 | INFO     | chi2: 1.445206298604914
[2025-11-27 03:56:40] 2025-11-27 10:56:07,755 | INFO     | current chi2=1.445206298604914 (change=61.948998419264925 %)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,755 | INFO     | sum of square deviations: 3973055407.829067
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | sum of deviations: 43504909483.06837
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | mean x: 1764233807.6068375
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | mean y: 2879881.4572649575
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | intersect: -19315459338.19216
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | chi2: 1.4200315224831028
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | current chi2=1.4200315224831028 (change=1.7419503461971333 %)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | left removable region: 20
[2025-11-27 03:56:40] 2025-11-27 10:56:07,756 | INFO     | sum of square deviations: 2996475325.727703
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | sum of deviations: 64804023131.107956
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | mean x: 1764233777.1032863
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | mean y: 2912884.131455399
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | intersect: -38151730178.82054
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | chi2: 0.020020442632489453
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | current memory leak: 21.63 B/s (using 213 data points, chi2=0.02)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | could have reported an average CPU frequency of 4677 MHz (12 samples)
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | ..............................
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . Timing measurements:
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . get job = 0 s
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . initial setup = 2 s
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . payload setup = 3 s
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . stage-in = 0 s
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . payload execution = 14866 s
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . stage-out = 2 s
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | . log creation = 0 s
[2025-11-27 03:56:40] 2025-11-27 10:56:07,757 | INFO     | ..............................
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | 
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | job summary report
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | --------------------------------------------------
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | PanDA job id: 6898041254
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | task id: 47556161
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | errors: (none)
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | pilot state: finished 
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | transexitcode: 0
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | exeerrorcode: 0
[2025-11-27 03:56:40] 2025-11-27 10:56:08,257 | INFO     | exeerrordiag: 
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | exitcode: 0
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | exitmsg: OK
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | cpuconsumptiontime: 106094 s
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | nevents: 1000
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | neventsw: 0
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | pid: 3088686
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | pgrp: 3088686
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | corecount: 8
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | event service: False
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | sizes: {0: 2284271, 3: 2284533, 11: 2284561, 14873: 2316652, 14877: 2325660, 14879: 2325716, 14883: 2326090}
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | --------------------------------------------------
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | 
[2025-11-27 03:56:40] 2025-11-27 10:56:08,258 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-27 03:56:40] 2025-11-27 10:56:08,270 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,270 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | job 6898041254 has completed (purged errors)
[2025-11-27 03:56:40] 2025-11-27 10:56:08,271 | INFO     | overall cleanup function is called
[2025-11-27 03:56:40] 2025-11-27 10:56:09,283 | INFO     | --- collectZombieJob: --- 10, [3088686]
[2025-11-27 03:56:40] 2025-11-27 10:56:09,283 | INFO     | zombie collector waiting for pid 3088686
[2025-11-27 03:56:40] 2025-11-27 10:56:09,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:56:40] 2025-11-27 10:56:09,283 | INFO     | collected zombie processes
[2025-11-27 03:56:40] 2025-11-27 10:56:09,283 | INFO     | will attempt to kill all subprocesses of pid=3088686
[2025-11-27 03:56:40] 2025-11-27 10:56:09,361 | INFO     | process IDs to be killed: [3088686] (in reverse order)
[2025-11-27 03:56:40] 2025-11-27 10:56:09,398 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:56:40] 2025-11-27 10:56:09,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:56:40] 2025-11-27 10:56:09,401 | INFO     | did not find any defunct processes belonging to 3088686
[2025-11-27 03:56:40] 2025-11-27 10:56:09,403 | INFO     | did not find any defunct processes belonging to 3088686
[2025-11-27 03:56:40] 2025-11-27 10:56:09,403 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:56:40] 2025-11-27 10:56:09,403 | INFO     | ready for new job
[2025-11-27 03:56:40] 2025-11-27 10:56:09,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:56:40] 2025-11-27 10:56:09,405 | INFO     | ***************************************
[2025-11-27 03:56:40] 2025-11-27 10:56:09,405 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:56:40] 2025-11-27 10:56:09,405 | INFO     | ***************************************
[2025-11-27 03:56:40] 2025-11-27 10:56:09,405 | INFO     | 
[2025-11-27 03:56:40] 2025-11-27 10:56:09,406 | INFO     | architecture information:
[2025-11-27 03:56:40] 2025-11-27 10:56:09,406 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:56:40] 2025-11-27 10:56:09,417 | INFO     | cat /etc/os-release:
[2025-11-27 03:56:40] NAME="CentOS Linux"
[2025-11-27 03:56:40] VERSION="7 (Core)"
[2025-11-27 03:56:40] ID="centos"
[2025-11-27 03:56:40] ID_LIKE="rhel fedora"
[2025-11-27 03:56:40] VERSION_ID="7"
[2025-11-27 03:56:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:56:40] ANSI_COLOR="0;31"
[2025-11-27 03:56:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:56:40] HOME_URL="https://www.centos.org/"
[2025-11-27 03:56:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:56:40] 
[2025-11-27 03:56:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:56:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:56:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:56:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:56:40] 
[2025-11-27 03:56:40] 2025-11-27 10:56:09,417 | INFO     | ***************************************
[2025-11-27 03:56:40] 2025-11-27 10:56:09,920 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-27 03:56:40] 2025-11-27 10:56:09,930 | INFO     | sufficient remaining disk space (163339829248 B)
[2025-11-27 03:56:40] 2025-11-27 10:56:09,930 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:56:40] 2025-11-27 10:56:09,930 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:56:40] 2025-11-27 10:56:09,930 | INFO     | update_server=False
[2025-11-27 03:56:40] 2025-11-27 10:56:09,930 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:56:40] 2025-11-27 10:56:09,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:56:40] 2025-11-27 10:56:09,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:56:40] 2025-11-27 10:56:10,345 | INFO     | all job control threads have been joined
[2025-11-27 03:56:40] 2025-11-27 10:56:10,495 | INFO     | all data control threads have been joined
[2025-11-27 03:56:40] 2025-11-27 10:56:10,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:56:40] 2025-11-27 10:56:10,514 | INFO     | aborting loop
[2025-11-27 03:56:40] 2025-11-27 10:56:10,935 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,086 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,305 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,351 | INFO     | [job] control thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,425 | INFO     | all payload control threads have been joined
[2025-11-27 03:56:40] 2025-11-27 10:56:11,459 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,500 | INFO     | [data] control thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,519 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,730 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,856 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:11,936 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:12,216 | INFO     | [job] validate thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:12,333 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:12,430 | INFO     | [payload] control thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:12,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:56:40] 2025-11-27 10:56:13,813 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:13,935 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:14,849 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:56:40] 2025-11-27 10:56:20,567 | INFO     | job.realtimelogging is not enabled
[2025-11-27 03:56:40] 2025-11-27 10:56:21,572 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:56:40] 2025-11-27 10:56:23,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124389542012736)>', '<ExcThread(monitor, started 124388695340800)>']
[2025-11-27 03:56:40] 2025-11-27 10:56:28,381 | INFO     | all workflow threads have been joined
[2025-11-27 03:56:40] 2025-11-27 10:56:28,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:56:40] 2025-11-27 10:56:28,381 | INFO     | traces error code: 0
[2025-11-27 03:56:40] 2025-11-27 10:56:28,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | INFO     | PID=3076040 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | INFO     | .. there are 4 such processes running
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 03:56:40] 2025-11-27 10:56:40,323 | INFO     | [monitor] control thread has ended
[2025-11-27 03:56:40] 2025-11-27 10:56:40,378 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:56:40] 2025-11-27 10:56:40,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:56:40] 2025-11-27 10:56:40,380 [wrapper] pilotpid: 3076040
[2025-11-27 03:56:40] 2025-11-27 10:56:40,382 [wrapper] Pilot exit status: 0
[2025-11-27 03:56:40] 2025-11-27 10:56:40,387 [wrapper] pandaids: 6898041254
[2025-11-27 03:56:40] 2025-11-27 10:56:40,409 [wrapper] cleanup supervisor_pilot 3282045 3076041
[2025-11-27 03:56:40] 2025-11-27 10:56:40,411 [wrapper] Test setup, not cleaning
[2025-11-27 03:56:40] 2025-11-27 10:56:40,412 [wrapper] apfmon messages muted
[2025-11-27 03:56:40] 2025-11-27 10:56:40,413 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:56:40] 2025-11-27 10:56:40,415 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:56:40]  *** Error codes and diagnostics ***
[2025-11-27 03:56:40]     "exeErrorCode": 0,
[2025-11-27 03:56:40]     "exeErrorDiag": "",
[2025-11-27 03:56:40]     "pilotErrorCode": 0,
[2025-11-27 03:56:40]     "pilotErrorDiag": "",
[2025-11-27 03:56:40]  *** Listing of results directory ***
[2025-11-27 03:56:40] total 1305472
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc    576529 Nov 25 19:38 pilot3.tar.gz
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc      5112 Nov 25 20:12 queuedata.json
[2025-11-27 03:56:40] -rwx------ 1 boinc boinc     36292 Nov 25 20:13 runpilot2-wrapper.sh
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc       100 Nov 26 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:56:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 23:47 run_atlas
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc       105 Nov 26 23:47 job.xml
[2025-11-27 03:56:40] -rw-r--r-- 2 boinc boinc     15847 Nov 26 23:47 start_atlas.sh
[2025-11-27 03:56:40] drwxrwx--x 2 boinc boinc      4096 Nov 26 23:47 shared
[2025-11-27 03:56:40] -rw-r--r-- 2 boinc boinc    590105 Nov 26 23:47 input.tar.gz
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc      9935 Nov 26 23:47 init_data.xml
[2025-11-27 03:56:40] -rw-r--r-- 2 boinc boinc 411548940 Nov 26 23:47 EVNT.47483658._002418.pool.root.1
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc         0 Nov 26 23:47 boinc_lockfile
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc      2785 Nov 26 23:47 pandaJob.out
[2025-11-27 03:56:40] -rw------- 1 boinc boinc    991554 Nov 26 23:47 agis_schedconf.cvmfs.json
[2025-11-27 03:56:40] drwx------ 5 boinc boinc      4096 Nov 26 23:47 pilot3
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc       532 Nov 27 03:51 boinc_task_state.xml
[2025-11-27 03:56:40] -rw------- 1 boinc boinc 913865535 Nov 27 03:55 HITS.47556161._004005.pool.root.1
[2025-11-27 03:56:40] -rw------- 1 boinc boinc      1038 Nov 27 03:55 memory_monitor_summary.json
[2025-11-27 03:56:40] -rw------- 1 boinc boinc   1516240 Nov 27 03:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:56:40] -rw------- 1 boinc boinc   1556162 Nov 27 03:56 log.47556161._004005.job.log.tgz.1
[2025-11-27 03:56:40] -rw------- 1 boinc boinc      8552 Nov 27 03:56 heartbeat.json
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc        29 Nov 27 03:56 wrapper_checkpoint.txt
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc      8192 Nov 27 03:56 boinc_mmap_file
[2025-11-27 03:56:40] -rw------- 1 boinc boinc       892 Nov 27 03:56 pilotlog.txt
[2025-11-27 03:56:40] -rw------- 1 boinc boinc        95 Nov 27 03:56 pilot_heartbeat.json
[2025-11-27 03:56:40] -rw------- 1 boinc boinc   2177282 Nov 27 03:56 log.47556161._004005.job.log.1
[2025-11-27 03:56:40] -rw------- 1 boinc boinc       353 Nov 27 03:56 output.list
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc       620 Nov 27 03:56 runtime_log
[2025-11-27 03:56:40] -rw------- 1 boinc boinc   3758080 Nov 27 03:56 result.tar.gz
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc      8923 Nov 27 03:56 runtime_log.err
[2025-11-27 03:56:40] -rw------- 1 boinc boinc       662 Nov 27 03:56 NtrKDmf9Ki8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaqJKDmOD8ENn.diag
[2025-11-27 03:56:40] -rw-r--r-- 1 boinc boinc     21328 Nov 27 03:56 stderr.txt
[2025-11-27 03:56:40] HITS file was successfully produced:
[2025-11-27 03:56:40] -rw------- 1 boinc boinc 913865535 Nov 27 03:55 shared/HITS.pool.root.1
[2025-11-27 03:56:40]  *** Contents of shared directory: ***
[2025-11-27 03:56:40] total 1298628
[2025-11-27 03:56:40] -rw-r--r-- 2 boinc boinc     15847 Nov 26 23:47 start_atlas.sh
[2025-11-27 03:56:40] -rw-r--r-- 2 boinc boinc    590105 Nov 26 23:47 input.tar.gz
[2025-11-27 03:56:40] -rw-r--r-- 2 boinc boinc 411548940 Nov 26 23:47 ATLAS.root_0
[2025-11-27 03:56:40] -rw------- 1 boinc boinc 913865535 Nov 27 03:55 HITS.pool.root.1
[2025-11-27 03:56:40] -rw------- 1 boinc boinc   3758080 Nov 27 03:56 result.tar.gz
03:56:41 (3072130): run_atlas exited; CPU time 105932.662279
03:56:41 (3072130): called boinc_finish(0)

</stderr_txt>
]]>

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