Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:34:46 (3662364): wrapper (7.7.26015): starting
22:34:46 (3662364): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 22:34:46] Arguments: --nthreads 9
[2025-11-26 22:34:46] Threads: 9
[2025-11-26 22:34:46] Checking for CVMFS
[2025-11-26 22:34:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:34:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:34:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:34:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:34:47] 2.13.3.0 12085 29523 373360 153345 0 128 17865862 25181184 32206 16776704 0 163768908 99.586 171777593 23572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 22:34:47] CVMFS is ok
[2025-11-26 22:34:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:34:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:34:47] Further information can be found at the LHC@home message board.
[2025-11-26 22:34:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:34:47] Checking for apptainer binary...
[2025-11-26 22:34:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:34:47] Running /usr/bin/apptainer --version
[2025-11-26 22:34:47] apptainer version 1.4.4-1.el9
[2025-11-26 22:34:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:34:47] c-16-38.aglt2.org
[2025-11-26 22:34:47] apptainer works
[2025-11-26 22:34:47] Set ATHENA_PROC_NUMBER=9
[2025-11-26 22:34:47] Set ATHENA_CORE_NUMBER=9
[2025-11-26 22:34:47] Starting ATLAS job with PandaID=6898120327
[2025-11-26 22:34:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:14:19]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:14:19] 2025-11-28 03:13:03,441 | INFO     | monitor loop #4645: job 0:6898120327 is in state 'finished'
[2025-11-27 22:14:19] 2025-11-28 03:13:03,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:14:19] 2025-11-28 03:13:03,518 | INFO     | time since job start (85052s) is within the limit (172800.0s)
[2025-11-27 22:14:19] 2025-11-28 03:13:05,528 | INFO     | time since job start (85054s) is within the limit (172800.0s)
[2025-11-27 22:14:19] 2025-11-28 03:13:05,964 | INFO     | monitor loop #4646: job 0:6898120327 is in state 'finished'
[2025-11-27 22:14:19] 2025-11-28 03:13:05,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:14:19] 2025-11-28 03:13:07,535 | INFO     | time since job start (85056s) is within the limit (172800.0s)
[2025-11-27 22:14:19] 2025-11-28 03:13:08,469 | INFO     | monitor loop #4647: job 0:6898120327 is in state 'finished'
[2025-11-27 22:14:19] 2025-11-28 03:13:08,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,294 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 22:14:19] 2025-11-28 03:13:09,314 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2843.6746666666663
[2025-11-27 22:14:19] 2025-11-28 03:13:09,323 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6898120327/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,324 | INFO     | extracted standard info from prmon json
[2025-11-27 22:14:19] 2025-11-28 03:13:09,324 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:14:19] 2025-11-28 03:13:09,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:14:19] 2025-11-28 03:13:09,348 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:14:19] 2025-11-28 03:13:09,350 | INFO     | sum of square deviations: 838193123386.2676
[2025-11-27 22:14:19] 2025-11-28 03:13:09,402 | INFO     | sum of deviations: 4487022438155.911
[2025-11-27 22:14:19] 2025-11-28 03:13:09,402 | INFO     | mean x: 1764257077.1249104
[2025-11-27 22:14:19] 2025-11-28 03:13:09,403 | INFO     | mean y: 3134040.2763819094
[2025-11-27 22:14:19] 2025-11-28 03:13:09,403 | INFO     | intersect: -9441301699.966213
[2025-11-27 22:14:19] 2025-11-28 03:13:09,405 | INFO     | chi2: 13.505211766900112
[2025-11-27 22:14:19] 2025-11-28 03:13:09,407 | INFO     | sum of square deviations: 829200871498.6075
[2025-11-27 22:14:19] 2025-11-28 03:13:09,454 | INFO     | sum of deviations: 4990984559177.53
[2025-11-27 22:14:19] 2025-11-28 03:13:09,454 | INFO     | mean x: 1764256924.6325648
[2025-11-27 22:14:19] 2025-11-28 03:13:09,454 | INFO     | mean y: 3142585.271613833
[2025-11-27 22:14:19] 2025-11-28 03:13:09,454 | INFO     | intersect: -10615972000.738506
[2025-11-27 22:14:19] 2025-11-28 03:13:09,456 | INFO     | chi2: 10.334388208745532
[2025-11-27 22:14:19] 2025-11-28 03:13:09,456 | INFO     | current chi2=10.334388208745532 (change=23.478517870604172 %)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,456 | INFO     | right removable region: 1387
[2025-11-27 22:14:19] 2025-11-28 03:13:09,458 | INFO     | sum of square deviations: 829199065898.6079
[2025-11-27 22:14:19] 2025-11-28 03:13:09,516 | INFO     | sum of deviations: 3907483013405.8887
[2025-11-27 22:14:19] 2025-11-28 03:13:09,517 | INFO     | mean x: 1764257229.6325648
[2025-11-27 22:14:19] 2025-11-28 03:13:09,517 | INFO     | mean y: 3143865.8076368878
[2025-11-27 22:14:19] 2025-11-28 03:13:09,517 | INFO     | intersect: -8310668148.195203
[2025-11-27 22:14:19] 2025-11-28 03:13:09,519 | INFO     | chi2: 9.820442692796217
[2025-11-27 22:14:19] 2025-11-28 03:13:09,519 | INFO     | current chi2=9.820442692796217 (change=27.284052539886016 %)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,521 | INFO     | sum of square deviations: 820269821408.6218
[2025-11-27 22:14:19] 2025-11-28 03:13:09,542 | INFO     | time since job start (85058s) is within the limit (172800.0s)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,568 | INFO     | sum of deviations: 3677997212222.6313
[2025-11-27 22:14:19] 2025-11-28 03:13:09,568 | INFO     | mean x: 1764257382.1381056
[2025-11-27 22:14:19] 2025-11-28 03:13:09,569 | INFO     | mean y: 3147781.5097613884
[2025-11-27 22:14:19] 2025-11-28 03:13:09,569 | INFO     | intersect: -7907583009.492547
[2025-11-27 22:14:19] 2025-11-28 03:13:09,571 | INFO     | chi2: 9.218644426201596
[2025-11-27 22:14:19] 2025-11-28 03:13:09,571 | INFO     | current chi2=9.218644426201596 (change=6.128015665078618 %)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,571 | INFO     | left removable region: 20
[2025-11-27 22:14:19] 2025-11-28 03:13:09,573 | INFO     | sum of square deviations: 792129732884.4315
[2025-11-27 22:14:19] 2025-11-28 03:13:09,621 | INFO     | sum of deviations: 4111130072684.2314
[2025-11-27 22:14:19] 2025-11-28 03:13:09,622 | INFO     | mean x: 1764257504.1543527
[2025-11-27 22:14:19] 2025-11-28 03:13:09,622 | INFO     | mean y: 3161522.776152158
[2025-11-27 22:14:19] 2025-11-28 03:13:09,622 | INFO     | intersect: -9153283160.693369
[2025-11-27 22:14:19] 2025-11-28 03:13:09,624 | INFO     | chi2: 5.221126891013132
[2025-11-27 22:14:19] 2025-11-28 03:13:09,624 | INFO     | current memory leak: 5.19 B/s (using 1367 data points, chi2=5.22)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,625 | INFO     | could have reported an average CPU frequency of 2815 MHz (49 samples)
[2025-11-27 22:14:19] 2025-11-28 03:13:09,625 | INFO     | ..............................
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . Timing measurements:
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . get job = 0 s
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . initial setup = 5 s
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . payload setup = 24 s
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . stage-in = 0 s
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . payload execution = 84966 s
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . stage-out = 4 s
[2025-11-27 22:14:19] 2025-11-28 03:13:09,626 | INFO     | . log creation = 0 s
[2025-11-27 22:14:19] 2025-11-28 03:13:09,627 | INFO     | ..............................
[2025-11-27 22:14:19] 2025-11-28 03:13:10,096 | INFO     | 
[2025-11-27 22:14:19] 2025-11-28 03:13:10,097 | INFO     | job summary report
[2025-11-27 22:14:19] 2025-11-28 03:13:10,177 | INFO     | --------------------------------------------------
[2025-11-27 22:14:19] 2025-11-28 03:13:10,177 | INFO     | PanDA job id: 6898120327
[2025-11-27 22:14:19] 2025-11-28 03:13:10,177 | INFO     | task id: 47556161
[2025-11-27 22:14:19] 2025-11-28 03:13:10,177 | INFO     | errors: (none)
[2025-11-27 22:14:19] 2025-11-28 03:13:10,177 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:14:19] 2025-11-28 03:13:10,177 | INFO     | pilot state: finished 
[2025-11-27 22:14:19] 2025-11-28 03:13:10,177 | INFO     | transexitcode: 0
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | exeerrorcode: 0
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | exeerrordiag: 
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | exitcode: 0
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | exitmsg: OK
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | cpuconsumptiontime: 318452 s
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | nevents: 1000
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | neventsw: 0
[2025-11-27 22:14:19] 2025-11-28 03:13:10,178 | INFO     | pid: 3674298
[2025-11-27 22:14:19] 2025-11-28 03:13:10,179 | INFO     | pgrp: 3674298
[2025-11-27 22:14:19] 2025-11-28 03:13:10,179 | INFO     | corecount: 9
[2025-11-27 22:14:19] 2025-11-28 03:13:10,179 | INFO     | event service: False
[2025-11-27 22:14:19] 2025-11-28 03:13:10,179 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284320, 13: 2284320, 18: 2284638, 23: 2284666, 84994: 2347956, 84995: 2347955, 84999: 2357005, 85003: 2357061, 85017: 2357307}
[2025-11-27 22:14:19] 2025-11-28 03:13:10,179 | INFO     | --------------------------------------------------
[2025-11-27 22:14:19] 2025-11-28 03:13:10,179 | INFO     | 
[2025-11-27 22:14:19] 2025-11-28 03:13:10,179 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 22:14:19] 2025-11-28 03:13:10,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,238 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:14:19] 2025-11-28 03:13:10,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:14:19] 2025-11-28 03:13:10,238 | INFO     | job 6898120327 has completed (purged errors)
[2025-11-27 22:14:19] 2025-11-28 03:13:10,238 | INFO     | overall cleanup function is called
[2025-11-27 22:14:19] 2025-11-28 03:13:11,264 | INFO     | --- collectZombieJob: --- 10, [3674298]
[2025-11-27 22:14:19] 2025-11-28 03:13:11,264 | INFO     | zombie collector waiting for pid 3674298
[2025-11-27 22:14:19] 2025-11-28 03:13:11,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:14:19] 2025-11-28 03:13:11,265 | INFO     | collected zombie processes
[2025-11-27 22:14:19] 2025-11-28 03:13:11,265 | INFO     | will attempt to kill all subprocesses of pid=3674298
[2025-11-27 22:14:19] 2025-11-28 03:13:13,464 | INFO     | process IDs to be killed: [3674298] (in reverse order)
[2025-11-27 22:14:19] 2025-11-28 03:13:13,694 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:14:19] 2025-11-28 03:13:13,694 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:14:19] 2025-11-28 03:13:13,717 | INFO     | did not find any defunct processes belonging to 3674298
[2025-11-27 22:14:19] 2025-11-28 03:13:13,738 | INFO     | did not find any defunct processes belonging to 3674298
[2025-11-27 22:14:19] 2025-11-28 03:13:13,739 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:14:19] 2025-11-28 03:13:13,740 | INFO     | ready for new job
[2025-11-27 22:14:19] 2025-11-28 03:13:13,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:14:19] 2025-11-28 03:13:13,745 | INFO     | ***************************************
[2025-11-27 22:14:19] 2025-11-28 03:13:13,746 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:14:19] 2025-11-28 03:13:13,746 | INFO     | ***************************************
[2025-11-27 22:14:19] 2025-11-28 03:13:13,746 | INFO     | 
[2025-11-27 22:14:19] 2025-11-28 03:13:13,749 | INFO     | architecture information:
[2025-11-27 22:14:19] 2025-11-28 03:13:13,750 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:14:19] 2025-11-28 03:13:13,793 | INFO     | cat /etc/os-release:
[2025-11-27 22:14:19] NAME="CentOS Linux"
[2025-11-27 22:14:19] VERSION="7 (Core)"
[2025-11-27 22:14:19] ID="centos"
[2025-11-27 22:14:19] ID_LIKE="rhel fedora"
[2025-11-27 22:14:19] VERSION_ID="7"
[2025-11-27 22:14:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:14:19] ANSI_COLOR="0;31"
[2025-11-27 22:14:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:14:19] HOME_URL="https://www.centos.org/"
[2025-11-27 22:14:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:14:19] 
[2025-11-27 22:14:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:14:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:14:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:14:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:14:19] 
[2025-11-27 22:14:19] 2025-11-28 03:13:13,793 | INFO     | ***************************************
[2025-11-27 22:14:19] 2025-11-28 03:13:14,313 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 22:14:19] 2025-11-28 03:13:14,393 | INFO     | sufficient remaining disk space (60136882176 B)
[2025-11-27 22:14:19] 2025-11-28 03:13:14,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:14:19] 2025-11-28 03:13:14,393 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:14:19] 2025-11-28 03:13:14,393 | INFO     | update_server=False
[2025-11-27 22:14:19] 2025-11-28 03:13:14,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:14:19] 2025-11-28 03:13:14,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:14:19] 2025-11-28 03:13:14,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:14:19] 2025-11-28 03:13:14,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:14:19] 2025-11-28 03:13:14,545 | INFO     | aborting loop
[2025-11-27 22:14:19] 2025-11-28 03:13:14,546 | INFO     | all payload control threads have been joined
[2025-11-27 22:14:19] 2025-11-28 03:13:14,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:14:19] 2025-11-28 03:13:15,399 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:15,500 | INFO     | all data control threads have been joined
[2025-11-27 22:14:19] 2025-11-28 03:13:15,547 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:15,554 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:15,554 | INFO     | [payload] control thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:15,755 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:15,761 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:15,893 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:16,107 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:16,108 | INFO     | all job control threads have been joined
[2025-11-27 22:14:19] 2025-11-28 03:13:16,179 | INFO     | [job] validate thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:16,506 | INFO     | [data] control thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:16,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:16,550 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:16,552 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:16,893 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:17,131 | INFO     | [job] control thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:18,473 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:14:19] 2025-11-28 03:13:43,802 | INFO     | PID=3666726 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 22:14:19] 2025-11-28 03:13:43,803 | INFO     | .. there are 50 such processes running
[2025-11-27 22:14:19] 2025-11-28 03:13:43,803 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:14:19] 2025-11-28 03:13:43,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:14:19] 2025-11-28 03:13:43,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:14:19] 2025-11-28 03:14:12,047 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:14:19] 2025-11-28 03:14:13,083 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140109862639424)>', '<ExcThread(monitor, started 140109148059392)>']
[2025-11-27 22:14:19] 2025-11-28 03:14:14,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:14:19] 2025-11-28 03:14:14,000 | INFO     | [monitor] control thread has ended
[2025-11-27 22:14:19] 2025-11-28 03:14:18,109 | INFO     | all workflow threads have been joined
[2025-11-27 22:14:19] 2025-11-28 03:14:18,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:14:19] 2025-11-28 03:14:18,110 | INFO     | traces error code: 0
[2025-11-27 22:14:19] 2025-11-28 03:14:18,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:14:19] 2025-11-28 03:14:18,382 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:14:19] 2025-11-28 03:14:18,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:14:19] 2025-11-28 03:14:18,473 [wrapper] pilotpid: 3666726
[2025-11-27 22:14:19] 2025-11-28 03:14:18,554 [wrapper] Pilot exit status: 0
[2025-11-27 22:14:19] 2025-11-28 03:14:18,712 [wrapper] pandaids: 6898120327
[2025-11-27 22:14:19] 2025-11-28 03:14:18,961 [wrapper] cleanup supervisor_pilot  627860 3666727
[2025-11-27 22:14:19] 2025-11-28 03:14:19,015 [wrapper] Test setup, not cleaning
[2025-11-27 22:14:19] 2025-11-28 03:14:19,028 [wrapper] apfmon messages muted
[2025-11-27 22:14:19] 2025-11-28 03:14:19,031 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:14:19] 2025-11-28 03:14:19,037 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:14:19]  *** Error codes and diagnostics ***
[2025-11-27 22:14:19]     "exeErrorCode": 0,
[2025-11-27 22:14:19]     "exeErrorDiag": "",
[2025-11-27 22:14:19]     "pilotErrorCode": 0,
[2025-11-27 22:14:19]     "pilotErrorDiag": "",
[2025-11-27 22:14:19]  *** Listing of results directory ***
[2025-11-27 22:14:19] total 1320048
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 22:14:19] -rwx------. 1 boincer umatlas     36292 Nov 25 22:24 runpilot2-wrapper.sh
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:24 queuedata.json
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas       100 Nov 26 22:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:14:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 22:34 run_atlas
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas       105 Nov 26 22:34 job.xml
[2025-11-27 22:14:19] -rw-r--r--. 2 boincer umatlas 409713207 Nov 26 22:34 EVNT.47483658._002421.pool.root.1
[2025-11-27 22:14:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:34 start_atlas.sh
[2025-11-27 22:14:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 22:34 shared
[2025-11-27 22:14:19] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 22:34 input.tar.gz
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas         0 Nov 26 22:34 boinc_lockfile
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 22:34 pandaJob.out
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas        57 Nov 26 22:34 setup.sh.local
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas    991546 Nov 26 22:35 agis_schedconf.cvmfs.json
[2025-11-27 22:14:19] drwx------. 5 boincer umatlas      4096 Nov 26 22:35 pilot3
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:52 boinc_task_state.xml
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas 912839414 Nov 27 22:11 HITS.47556161._004037.pool.root.1
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas      6616 Nov 27 22:12 init_data.xml
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas      1059 Nov 27 22:12 memory_monitor_summary.json
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas   1516240 Nov 27 22:12 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas   2505163 Nov 27 22:12 log.47556161._004037.job.log.tgz.1
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas        95 Nov 27 22:13 pilot_heartbeat.json
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas      8617 Nov 27 22:13 heartbeat.json
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 22:14 boinc_mmap_file
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas        29 Nov 27 22:14 wrapper_checkpoint.txt
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas      4824 Nov 27 22:14 pilotlog.txt
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas  10123606 Nov 27 22:14 log.47556161._004037.job.log.1
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas       353 Nov 27 22:14 output.list
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas       620 Nov 27 22:14 runtime_log
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas  12646400 Nov 27 22:14 result.tar.gz
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 22:14 runtime_log.err
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas       659 Nov 27 22:14 qJ8KDmbJLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDoMKDmX1JRWo.diag
[2025-11-27 22:14:19] -rw-r--r--. 1 boincer umatlas     21600 Nov 27 22:14 stderr.txt
[2025-11-27 22:14:19] HITS file was successfully produced:
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas 912839414 Nov 27 22:11 shared/HITS.pool.root.1
[2025-11-27 22:14:19]  *** Contents of shared directory: ***
[2025-11-27 22:14:19] total 1304512
[2025-11-27 22:14:19] -rw-r--r--. 2 boincer umatlas 409713207 Nov 26 22:34 ATLAS.root_0
[2025-11-27 22:14:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:34 start_atlas.sh
[2025-11-27 22:14:19] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 22:34 input.tar.gz
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas 912839414 Nov 27 22:11 HITS.pool.root.1
[2025-11-27 22:14:19] -rw-------. 1 boincer umatlas  12646400 Nov 27 22:14 result.tar.gz
22:14:20 (3662364): run_atlas exited; CPU time 322046.138141
22:14:20 (3662364): called boinc_finish(0)

</stderr_txt>
]]>

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