Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:49:06 (25827): wrapper (7.7.26015): starting
21:49:06 (25827): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 21:49:06] Arguments: --nthreads 12
[2025-11-26 21:49:06] Threads: 12
[2025-11-26 21:49:06] Checking for CVMFS
[2025-11-26 21:49:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:49:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:49:06] 2.11.2.0 6893 118456 91300 153343 1 81 12683601 20275201 1 130560 0 50719427 99.933 6053228 31288 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:49:06] CVMFS is ok
[2025-11-26 21:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:49:06] Further information can be found at the LHC@home message board.
[2025-11-26 21:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:49:06] Checking for apptainer binary...
[2025-11-26 21:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:49:06] Running /usr/bin/apptainer --version
[2025-11-26 21:49:06] apptainer version 1.3.2-1.el7
[2025-11-26 21:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:49:08] c-205-3.aglt2.org
[2025-11-26 21:49:08] apptainer works
[2025-11-26 21:49:08] Set ATHENA_PROC_NUMBER=12
[2025-11-26 21:49:08] Set ATHENA_CORE_NUMBER=12
[2025-11-26 21:49:08] Starting ATLAS job with PandaID=6898120496
[2025-11-26 21:49:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:01:11]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:01:11] 2025-11-27 10:00:45,430 | INFO     | time since job start (25882s) is within the limit (172800.0s)
[2025-11-27 05:01:11] 2025-11-27 10:00:46,215 | INFO     | monitor loop #1941: job 0:6898120496 is in state 'finished'
[2025-11-27 05:01:11] 2025-11-27 10:00:46,215 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,435 | INFO     | time since job start (25884s) is within the limit (172800.0s)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,490 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 05:01:11] 2025-11-27 10:00:47,493 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-27 05:01:11] 2025-11-27 10:00:47,495 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898120496/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,496 | INFO     | extracted standard info from prmon json
[2025-11-27 05:01:11] 2025-11-27 10:00:47,496 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:01:11] 2025-11-27 10:00:47,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:01:11] 2025-11-27 10:00:47,502 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:01:11] 2025-11-27 10:00:47,503 | INFO     | sum of square deviations: 23635948481.462193
[2025-11-27 05:01:11] 2025-11-27 10:00:47,507 | INFO     | sum of deviations: 419672404869.155
[2025-11-27 05:01:11] 2025-11-27 10:00:47,507 | INFO     | mean x: 1764224694.740566
[2025-11-27 05:01:11] 2025-11-27 10:00:47,507 | INFO     | mean y: 3420118.1014150945
[2025-11-27 05:01:11] 2025-11-27 10:00:47,507 | INFO     | intersect: -31321594020.934357
[2025-11-27 05:01:11] 2025-11-27 10:00:47,508 | INFO     | chi2: 5.340025750618318
[2025-11-27 05:01:11] 2025-11-27 10:00:47,508 | INFO     | sum of square deviations: 22809619911.169388
[2025-11-27 05:01:11] 2025-11-27 10:00:47,512 | INFO     | sum of deviations: 565774580449.4248
[2025-11-27 05:01:11] 2025-11-27 10:00:47,512 | INFO     | mean x: 1764224542.2434368
[2025-11-27 05:01:11] 2025-11-27 10:00:47,512 | INFO     | mean y: 3447048.427207637
[2025-11-27 05:01:11] 2025-11-27 10:00:47,512 | INFO     | intersect: -43756747294.73168
[2025-11-27 05:01:11] 2025-11-27 10:00:47,513 | INFO     | chi2: 2.8215114248465265
[2025-11-27 05:01:11] 2025-11-27 10:00:47,513 | INFO     | current chi2=2.8215114248465265 (change=47.16296219133727 %)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,513 | INFO     | sum of square deviations: 22002780078.369526
[2025-11-27 05:01:11] 2025-11-27 10:00:47,517 | INFO     | sum of deviations: 593728375792.9425
[2025-11-27 05:01:11] 2025-11-27 10:00:47,517 | INFO     | mean x: 1764224389.7463768
[2025-11-27 05:01:11] 2025-11-27 10:00:47,517 | INFO     | mean y: 3452303.961352657
[2025-11-27 05:01:11] 2025-11-27 10:00:47,517 | INFO     | intersect: -47602808256.18293
[2025-11-27 05:01:11] 2025-11-27 10:00:47,518 | INFO     | chi2: 2.5850494511707938
[2025-11-27 05:01:11] 2025-11-27 10:00:47,518 | INFO     | current chi2=2.5850494511707938 (change=8.380684607314496 %)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,518 | INFO     | right removable region: 413
[2025-11-27 05:01:11] 2025-11-27 10:00:47,519 | INFO     | sum of square deviations: 22809583310.653976
[2025-11-27 05:01:11] 2025-11-27 10:00:47,523 | INFO     | sum of deviations: 274725479513.05948
[2025-11-27 05:01:11] 2025-11-27 10:00:47,523 | INFO     | mean x: 1764224847.24105
[2025-11-27 05:01:11] 2025-11-27 10:00:47,523 | INFO     | mean y: 3446792.682577566
[2025-11-27 05:01:11] 2025-11-27 10:00:47,523 | INFO     | intersect: -21245407714.04428
[2025-11-27 05:01:11] 2025-11-27 10:00:47,523 | INFO     | chi2: 2.8966152616393854
[2025-11-27 05:01:11] 2025-11-27 10:00:47,524 | INFO     | current chi2=2.8966152616393854 (change=45.75653008220067 %)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,524 | INFO     | sum of square deviations: 22002706999.345387
[2025-11-27 05:01:11] 2025-11-27 10:00:47,528 | INFO     | sum of deviations: 242847793151.9953
[2025-11-27 05:01:11] 2025-11-27 10:00:47,528 | INFO     | mean x: 1764224999.741546
[2025-11-27 05:01:11] 2025-11-27 10:00:47,528 | INFO     | mean y: 3452810.5700483094
[2025-11-27 05:01:11] 2025-11-27 10:00:47,528 | INFO     | intersect: -19468612505.009556
[2025-11-27 05:01:11] 2025-11-27 10:00:47,529 | INFO     | chi2: 2.8490917120700794
[2025-11-27 05:01:11] 2025-11-27 10:00:47,529 | INFO     | current chi2=2.8490917120700794 (change=1.6406579844645761 %)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,529 | INFO     | left removable region: 20
[2025-11-27 05:01:11] 2025-11-27 10:00:47,529 | INFO     | sum of square deviations: 18821473213.562107
[2025-11-27 05:01:11] 2025-11-27 10:00:47,533 | INFO     | sum of deviations: 377303806495.275
[2025-11-27 05:01:11] 2025-11-27 10:00:47,533 | INFO     | mean x: 1764224969.249364
[2025-11-27 05:01:11] 2025-11-27 10:00:47,533 | INFO     | mean y: 3493819.099236641
[2025-11-27 05:01:11] 2025-11-27 10:00:47,533 | INFO     | intersect: -35362961763.779945
[2025-11-27 05:01:11] 2025-11-27 10:00:47,533 | INFO     | chi2: 0.0574116139062082
[2025-11-27 05:01:11] 2025-11-27 10:00:47,534 | INFO     | current memory leak: 20.05 B/s (using 393 data points, chi2=0.06)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,534 | INFO     | could have reported an average CPU frequency of 2397 MHz (18 samples)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,534 | INFO     | ..............................
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . Timing measurements:
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . get job = 0 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . initial setup = 2 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . payload setup = 7 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . stage-in = 0 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . payload execution = 25844 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . stage-out = 3 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | . log creation = 0 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,535 | INFO     | ..............................
[2025-11-27 05:01:11] 2025-11-27 10:00:47,616 | INFO     | 
[2025-11-27 05:01:11] 2025-11-27 10:00:47,616 | INFO     | job summary report
[2025-11-27 05:01:11] 2025-11-27 10:00:47,617 | INFO     | --------------------------------------------------
[2025-11-27 05:01:11] 2025-11-27 10:00:47,617 | INFO     | PanDA job id: 6898120496
[2025-11-27 05:01:11] 2025-11-27 10:00:47,617 | INFO     | task id: 47556161
[2025-11-27 05:01:11] 2025-11-27 10:00:47,617 | INFO     | errors: (none)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,617 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:01:11] 2025-11-27 10:00:47,617 | INFO     | pilot state: finished 
[2025-11-27 05:01:11] 2025-11-27 10:00:47,618 | INFO     | transexitcode: 0
[2025-11-27 05:01:11] 2025-11-27 10:00:47,618 | INFO     | exeerrorcode: 0
[2025-11-27 05:01:11] 2025-11-27 10:00:47,618 | INFO     | exeerrordiag: 
[2025-11-27 05:01:11] 2025-11-27 10:00:47,618 | INFO     | exitcode: 0
[2025-11-27 05:01:11] 2025-11-27 10:00:47,618 | INFO     | exitmsg: OK
[2025-11-27 05:01:11] 2025-11-27 10:00:47,618 | INFO     | cpuconsumptiontime: 297107 s
[2025-11-27 05:01:11] 2025-11-27 10:00:47,619 | INFO     | nevents: 1000
[2025-11-27 05:01:11] 2025-11-27 10:00:47,619 | INFO     | neventsw: 0
[2025-11-27 05:01:11] 2025-11-27 10:00:47,619 | INFO     | pid: 3610
[2025-11-27 05:01:11] 2025-11-27 10:00:47,619 | INFO     | pgrp: 3610
[2025-11-27 05:01:11] 2025-11-27 10:00:47,619 | INFO     | corecount: 12
[2025-11-27 05:01:11] 2025-11-27 10:00:47,619 | INFO     | event service: False
[2025-11-27 05:01:11] 2025-11-27 10:00:47,620 | INFO     | sizes: {0: 2284264, 5: 2284526, 11: 2284582, 25856: 2321845, 25860: 2330839, 25863: 2330895, 25868: 2331269}
[2025-11-27 05:01:11] 2025-11-27 10:00:47,620 | INFO     | --------------------------------------------------
[2025-11-27 05:01:11] 2025-11-27 10:00:47,620 | INFO     | 
[2025-11-27 05:01:11] 2025-11-27 10:00:47,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:01:11] 2025-11-27 10:00:47,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,646 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,646 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:01:11] 2025-11-27 10:00:47,646 | INFO     | job 6898120496 has completed (purged errors)
[2025-11-27 05:01:11] 2025-11-27 10:00:47,646 | INFO     | overall cleanup function is called
[2025-11-27 05:01:11] 2025-11-27 10:00:48,663 | INFO     | --- collectZombieJob: --- 10, [3610]
[2025-11-27 05:01:11] 2025-11-27 10:00:48,663 | INFO     | zombie collector waiting for pid 3610
[2025-11-27 05:01:11] 2025-11-27 10:00:48,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:01:11] 2025-11-27 10:00:48,664 | INFO     | collected zombie processes
[2025-11-27 05:01:11] 2025-11-27 10:00:48,664 | INFO     | will attempt to kill all subprocesses of pid=3610
[2025-11-27 05:01:11] 2025-11-27 10:00:48,758 | INFO     | process IDs to be killed: [3610] (in reverse order)
[2025-11-27 05:01:11] 2025-11-27 10:00:48,809 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:01:11] 2025-11-27 10:00:48,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:01:11] 2025-11-27 10:00:48,813 | INFO     | did not find any defunct processes belonging to 3610
[2025-11-27 05:01:11] 2025-11-27 10:00:48,815 | INFO     | did not find any defunct processes belonging to 3610
[2025-11-27 05:01:11] 2025-11-27 10:00:48,818 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:01:11] 2025-11-27 10:00:48,818 | INFO     | ready for new job
[2025-11-27 05:01:11] 2025-11-27 10:00:48,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:01:11] 2025-11-27 10:00:48,820 | INFO     | ***************************************
[2025-11-27 05:01:11] 2025-11-27 10:00:48,820 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:01:11] 2025-11-27 10:00:48,821 | INFO     | ***************************************
[2025-11-27 05:01:11] 2025-11-27 10:00:48,821 | INFO     | 
[2025-11-27 05:01:11] 2025-11-27 10:00:48,821 | INFO     | architecture information:
[2025-11-27 05:01:11] 2025-11-27 10:00:48,822 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:01:11] 2025-11-27 10:00:48,838 | INFO     | cat /etc/os-release:
[2025-11-27 05:01:11] NAME="CentOS Linux"
[2025-11-27 05:01:11] VERSION="7 (Core)"
[2025-11-27 05:01:11] ID="centos"
[2025-11-27 05:01:11] ID_LIKE="rhel fedora"
[2025-11-27 05:01:11] VERSION_ID="7"
[2025-11-27 05:01:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:01:11] ANSI_COLOR="0;31"
[2025-11-27 05:01:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:01:11] HOME_URL="https://www.centos.org/"
[2025-11-27 05:01:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:01:11] 
[2025-11-27 05:01:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:01:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:01:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:01:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:01:11] 
[2025-11-27 05:01:11] 2025-11-27 10:00:48,838 | INFO     | ***************************************
[2025-11-27 05:01:11] 2025-11-27 10:00:49,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:01:11] 2025-11-27 10:00:49,359 | INFO     | sufficient remaining disk space (28370272256 B)
[2025-11-27 05:01:11] 2025-11-27 10:00:49,359 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:01:11] 2025-11-27 10:00:49,359 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:01:11] 2025-11-27 10:00:49,360 | INFO     | update_server=False
[2025-11-27 05:01:11] 2025-11-27 10:00:49,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:01:11] 2025-11-27 10:00:49,360 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 05:01:11] 2025-11-27 10:00:49,360 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:01:11] 2025-11-27 10:00:49,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:01:11] 2025-11-27 10:00:49,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:01:11] 2025-11-27 10:00:49,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:01:11] 2025-11-27 10:00:49,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:01:11] 2025-11-27 10:00:49,644 | INFO     | all payload control threads have been joined
[2025-11-27 05:01:11] 2025-11-27 10:00:49,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:01:11] 2025-11-27 10:00:49,722 | INFO     | aborting loop
[2025-11-27 05:01:11] 2025-11-27 10:00:50,332 | INFO     | all data control threads have been joined
[2025-11-27 05:01:11] 2025-11-27 10:00:50,349 | INFO     | all job control threads have been joined
[2025-11-27 05:01:11] 2025-11-27 10:00:50,365 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:50,367 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:50,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:01:11] 2025-11-27 10:00:50,580 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:50,649 | INFO     | [payload] control thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:50,728 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:50,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,052 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,117 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,337 | INFO     | [data] control thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,351 | INFO     | [job] control thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,578 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,617 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,657 | INFO     | [job] validate thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:51,914 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:52,561 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:00:53,367 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:01:11] 2025-11-27 10:01:05,865 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:01:11] 2025-11-27 10:01:05,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139942364051264)>', '<ExcThread(monitor, started 139941686265600)>']
[2025-11-27 05:01:11] 2025-11-27 10:01:06,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:01:11] 2025-11-27 10:01:06,422 | INFO     | [monitor] control thread has ended
[2025-11-27 05:01:11] 2025-11-27 10:01:10,985 | INFO     | all workflow threads have been joined
[2025-11-27 05:01:11] 2025-11-27 10:01:10,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:01:11] 2025-11-27 10:01:10,985 | INFO     | traces error code: 0
[2025-11-27 05:01:11] 2025-11-27 10:01:10,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:01:11] 2025-11-27 10:01:11,072 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:01:11] 2025-11-27 10:01:11,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:01:11] 2025-11-27 10:01:11,079 [wrapper] pilotpid: 29522
[2025-11-27 05:01:11] 2025-11-27 10:01:11,083 [wrapper] Pilot exit status: 0
[2025-11-27 05:01:11] 2025-11-27 10:01:11,098 [wrapper] pandaids: 6898120496
[2025-11-27 05:01:11] 2025-11-27 10:01:11,138 [wrapper] cleanup supervisor_pilot 26341 29523
[2025-11-27 05:01:11] 2025-11-27 10:01:11,142 [wrapper] Test setup, not cleaning
[2025-11-27 05:01:11] 2025-11-27 10:01:11,147 [wrapper] apfmon messages muted
[2025-11-27 05:01:11] 2025-11-27 10:01:11,151 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:01:11] 2025-11-27 10:01:11,154 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:01:11]  *** Error codes and diagnostics ***
[2025-11-27 05:01:11]     "exeErrorCode": 0,
[2025-11-27 05:01:11]     "exeErrorDiag": "",
[2025-11-27 05:01:11]     "pilotErrorCode": 0,
[2025-11-27 05:01:11]     "pilotErrorDiag": "",
[2025-11-27 05:01:11]  *** Listing of results directory ***
[2025-11-27 05:01:11] total 1315224
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 05:01:11] -rwx------ 1 boincer umatlas     36292 Nov 25 22:33 runpilot2-wrapper.sh
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 22:33 queuedata.json
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas       100 Nov 26 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:01:11] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 21:49 run_atlas
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas       105 Nov 26 21:49 job.xml
[2025-11-27 05:01:11] -rw-r--r-- 2 boincer umatlas 408333307 Nov 26 21:49 EVNT.47483658._002431.pool.root.1
[2025-11-27 05:01:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:49 start_atlas.sh
[2025-11-27 05:01:11] drwxrwx--x 2 boincer umatlas      4096 Nov 26 21:49 shared
[2025-11-27 05:01:11] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 21:49 input.tar.gz
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas         0 Nov 26 21:49 boinc_lockfile
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 21:49 pandaJob.out
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas        57 Nov 26 21:49 setup.sh.local
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas    991554 Nov 26 21:49 agis_schedconf.cvmfs.json
[2025-11-27 05:01:11] drwx------ 5 boincer umatlas      4096 Nov 26 21:49 pilot3
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas       532 Nov 27 04:50 boinc_task_state.xml
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas      5955 Nov 27 04:57 init_data.xml
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas 922907389 Nov 27 05:00 HITS.47556161._004140.pool.root.1
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas        95 Nov 27 05:00 pilot_heartbeat.json
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas      1073 Nov 27 05:00 memory_monitor_summary.json
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas   1516240 Nov 27 05:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas   2194999 Nov 27 05:00 log.47556161._004140.job.log.tgz.1
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas      8677 Nov 27 05:00 heartbeat.json
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 05:01 boinc_mmap_file
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas        29 Nov 27 05:01 wrapper_checkpoint.txt
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas      4552 Nov 27 05:01 pilotlog.txt
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas   3618305 Nov 27 05:01 log.47556161._004140.job.log.1
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas       353 Nov 27 05:01 output.list
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas       620 Nov 27 05:01 runtime_log
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas   5836800 Nov 27 05:01 result.tar.gz
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas      9340 Nov 27 05:01 runtime_log.err
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas       669 Nov 27 05:01 O8FODmlSLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOpMKDm6H6zgn.diag
[2025-11-27 05:01:11] -rw-r--r-- 1 boincer umatlas     21222 Nov 27 05:01 stderr.txt
[2025-11-27 05:01:11] HITS file was successfully produced:
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas 922907389 Nov 27 05:00 shared/HITS.pool.root.1
[2025-11-27 05:01:11]  *** Contents of shared directory: ***
[2025-11-27 05:01:11] total 1306344
[2025-11-27 05:01:11] -rw-r--r-- 2 boincer umatlas 408333307 Nov 26 21:49 ATLAS.root_0
[2025-11-27 05:01:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:49 start_atlas.sh
[2025-11-27 05:01:11] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 21:49 input.tar.gz
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas 922907389 Nov 27 05:00 HITS.pool.root.1
[2025-11-27 05:01:11] -rw------- 1 boincer umatlas   5836800 Nov 27 05:01 result.tar.gz
05:01:13 (25827): run_atlas exited; CPU time 290416.685414
05:01:13 (25827): called boinc_finish(0)

</stderr_txt>
]]>

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