Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:41:58 (2771): wrapper (7.7.26015): starting
21:41:58 (2771): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:41:58] Arguments: --nthreads 8
[2025-11-26 21:41:58] Threads: 8
[2025-11-26 21:41:58] Checking for CVMFS
[2025-11-26 21:41:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:41:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:41:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:41:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:41:59] 2.11.2.0 2466 118523 133588 153343 1 81 11948867 18432000 1885 130560 0 84375584 99.973 5107510 28319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:41:59] CVMFS is ok
[2025-11-26 21:41:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:41:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:41:59] Further information can be found at the LHC@home message board.
[2025-11-26 21:41:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:41:59] Checking for apptainer binary...
[2025-11-26 21:41:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:41:59] Running /usr/bin/apptainer --version
[2025-11-26 21:41:59] apptainer version 1.3.2-1.el7
[2025-11-26 21:41:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:42:00] c-206-20.aglt2.org
[2025-11-26 21:42:00] apptainer works
[2025-11-26 21:42:00] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:42:00] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:42:00] Starting ATLAS job with PandaID=6898120445
[2025-11-26 21:42:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:10:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:10:12] 2025-11-27 22:09:26,160 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:10:12] 2025-11-27 22:09:26,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:10:12] 2025-11-27 22:09:26,190 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:10:12] 2025-11-27 22:09:26,192 | INFO     | sum of square deviations: 469140531587.7869
[2025-11-27 17:10:12] 2025-11-27 22:09:26,233 | INFO     | sum of deviations: 1960385719009.288
[2025-11-27 17:10:12] 2025-11-27 22:09:26,234 | INFO     | mean x: 1764246342.0792682
[2025-11-27 17:10:12] 2025-11-27 22:09:26,234 | INFO     | mean y: 2865471.150696864
[2025-11-27 17:10:12] 2025-11-27 22:09:26,234 | INFO     | intersect: -7369346267.027352
[2025-11-27 17:10:12] 2025-11-27 22:09:26,236 | INFO     | chi2: 6.480029622427863
[2025-11-27 17:10:12] 2025-11-27 22:09:26,238 | INFO     | sum of square deviations: 463037494396.1049
[2025-11-27 17:10:12] 2025-11-27 22:09:26,298 | INFO     | sum of deviations: 2308966475585.12
[2025-11-27 17:10:12] 2025-11-27 22:09:26,298 | INFO     | mean x: 1764246189.5818024
[2025-11-27 17:10:12] 2025-11-27 22:09:26,298 | INFO     | mean y: 2874176.6404199474
[2025-11-27 17:10:12] 2025-11-27 22:09:26,298 | INFO     | intersect: -8794653789.719963
[2025-11-27 17:10:12] 2025-11-27 22:09:26,300 | INFO     | chi2: 3.758570495882077
[2025-11-27 17:10:12] 2025-11-27 22:09:26,300 | INFO     | current chi2=3.758570495882077 (change=41.997634040539175 %)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,302 | INFO     | sum of square deviations: 456987620991.90173
[2025-11-27 17:10:12] 2025-11-27 22:09:26,343 | INFO     | sum of deviations: 2507121792888.2295
[2025-11-27 17:10:12] 2025-11-27 22:09:26,343 | INFO     | mean x: 1764246037.0843585
[2025-11-27 17:10:12] 2025-11-27 22:09:26,343 | INFO     | mean y: 2879171.518453427
[2025-11-27 17:10:12] 2025-11-27 22:09:26,343 | INFO     | intersect: -9676113178.406216
[2025-11-27 17:10:12] 2025-11-27 22:09:26,345 | INFO     | chi2: 2.817277775195266
[2025-11-27 17:10:12] 2025-11-27 22:09:26,345 | INFO     | current chi2=2.817277775195266 (change=25.043902242038552 %)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,347 | INFO     | sum of square deviations: 450990678812.6864
[2025-11-27 17:10:12] 2025-11-27 22:09:26,384 | INFO     | sum of deviations: 2635881972332.594
[2025-11-27 17:10:12] 2025-11-27 22:09:26,384 | INFO     | mean x: 1764245884.5869374
[2025-11-27 17:10:12] 2025-11-27 22:09:26,384 | INFO     | mean y: 2882443.2427184465
[2025-11-27 17:10:12] 2025-11-27 22:09:26,385 | INFO     | intersect: -10308514533.27028
[2025-11-27 17:10:12] 2025-11-27 22:09:26,386 | INFO     | chi2: 2.3151932182706854
[2025-11-27 17:10:12] 2025-11-27 22:09:26,386 | INFO     | current chi2=2.3151932182706854 (change=17.821620620628405 %)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,386 | INFO     | right removable region: 1132
[2025-11-27 17:10:12] 2025-11-27 22:09:26,388 | INFO     | sum of square deviations: 463037088746.1055
[2025-11-27 17:10:12] 2025-11-27 22:09:26,427 | INFO     | sum of deviations: 1663426405642.4785
[2025-11-27 17:10:12] 2025-11-27 22:09:26,427 | INFO     | mean x: 1764246494.5818024
[2025-11-27 17:10:12] 2025-11-27 22:09:26,427 | INFO     | mean y: 2872882.56167979
[2025-11-27 17:10:12] 2025-11-27 22:09:26,427 | INFO     | intersect: -6335051824.715308
[2025-11-27 17:10:12] 2025-11-27 22:09:26,429 | INFO     | chi2: 4.43923567400474
[2025-11-27 17:10:12] 2025-11-27 22:09:26,429 | INFO     | current chi2=4.43923567400474 (change=31.493589803351885 %)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,431 | INFO     | sum of square deviations: 456987018861.4011
[2025-11-27 17:10:12] 2025-11-27 22:09:26,472 | INFO     | sum of deviations: 1591645320295.207
[2025-11-27 17:10:12] 2025-11-27 22:09:26,472 | INFO     | mean x: 1764246647.0817223
[2025-11-27 17:10:12] 2025-11-27 22:09:26,472 | INFO     | mean y: 2874691.567662566
[2025-11-27 17:10:12] 2025-11-27 22:09:26,472 | INFO     | intersect: -6141840155.41092
[2025-11-27 17:10:12] 2025-11-27 22:09:26,474 | INFO     | chi2: 4.390988339482452
[2025-11-27 17:10:12] 2025-11-27 22:09:26,474 | INFO     | current chi2=4.390988339482452 (change=1.0868387728278224 %)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,474 | INFO     | left removable region: 20
[2025-11-27 17:10:12] 2025-11-27 22:09:26,476 | INFO     | sum of square deviations: 426375278047.00653
[2025-11-27 17:10:12] 2025-11-27 22:09:26,515 | INFO     | sum of deviations: 2165760562548.1965
[2025-11-27 17:10:12] 2025-11-27 22:09:26,515 | INFO     | mean x: 1764246464.0899282
[2025-11-27 17:10:12] 2025-11-27 22:09:26,515 | INFO     | mean y: 2894345.8480215827
[2025-11-27 17:10:12] 2025-11-27 22:09:26,516 | INFO     | intersect: -8958543174.738768
[2025-11-27 17:10:12] 2025-11-27 22:09:26,517 | INFO     | chi2: 0.1969654271333766
[2025-11-27 17:10:12] 2025-11-27 22:09:26,517 | INFO     | current memory leak: 5.08 B/s (using 1112 data points, chi2=0.20)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,519 | INFO     | could have reported an average CPU frequency of 2627 MHz (42 samples)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,519 | INFO     | ..............................
[2025-11-27 17:10:12] 2025-11-27 22:09:26,519 | INFO     | . Timing measurements:
[2025-11-27 17:10:12] 2025-11-27 22:09:26,519 | INFO     | . get job = 0 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,520 | INFO     | . initial setup = 2 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,520 | INFO     | . payload setup = 5 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,520 | INFO     | . stage-in = 0 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,520 | INFO     | . payload execution = 70000 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,520 | INFO     | . stage-out = 3 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,520 | INFO     | . log creation = 0 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,521 | INFO     | ..............................
[2025-11-27 17:10:12] 2025-11-27 22:09:26,677 | INFO     | 
[2025-11-27 17:10:12] 2025-11-27 22:09:26,677 | INFO     | job summary report
[2025-11-27 17:10:12] 2025-11-27 22:09:26,677 | INFO     | --------------------------------------------------
[2025-11-27 17:10:12] 2025-11-27 22:09:26,677 | INFO     | PanDA job id: 6898120445
[2025-11-27 17:10:12] 2025-11-27 22:09:26,677 | INFO     | task id: 47556161
[2025-11-27 17:10:12] 2025-11-27 22:09:26,678 | INFO     | errors: (none)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,678 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:10:12] 2025-11-27 22:09:26,678 | INFO     | pilot state: finished 
[2025-11-27 17:10:12] 2025-11-27 22:09:26,678 | INFO     | transexitcode: 0
[2025-11-27 17:10:12] 2025-11-27 22:09:26,678 | INFO     | exeerrorcode: 0
[2025-11-27 17:10:12] 2025-11-27 22:09:26,678 | INFO     | exeerrordiag: 
[2025-11-27 17:10:12] 2025-11-27 22:09:26,679 | INFO     | exitcode: 0
[2025-11-27 17:10:12] 2025-11-27 22:09:26,679 | INFO     | exitmsg: OK
[2025-11-27 17:10:12] 2025-11-27 22:09:26,679 | INFO     | cpuconsumptiontime: 538252 s
[2025-11-27 17:10:12] 2025-11-27 22:09:26,679 | INFO     | nevents: 1000
[2025-11-27 17:10:12] 2025-11-27 22:09:26,679 | INFO     | neventsw: 0
[2025-11-27 17:10:12] 2025-11-27 22:09:26,679 | INFO     | pid: 13271
[2025-11-27 17:10:12] 2025-11-27 22:09:26,680 | INFO     | pgrp: 13271
[2025-11-27 17:10:12] 2025-11-27 22:09:26,680 | INFO     | corecount: 8
[2025-11-27 17:10:12] 2025-11-27 22:09:26,680 | INFO     | event service: False
[2025-11-27 17:10:12] 2025-11-27 22:09:26,680 | INFO     | sizes: {0: 2284264, 1: 2284292, 4: 2284554, 12: 2284582, 70009: 2341185, 70010: 2341184, 70014: 2350446, 70020: 2350636}
[2025-11-27 17:10:12] 2025-11-27 22:09:26,680 | INFO     | --------------------------------------------------
[2025-11-27 17:10:12] 2025-11-27 22:09:26,681 | INFO     | 
[2025-11-27 17:10:12] 2025-11-27 22:09:26,681 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 17:10:12] 2025-11-27 22:09:26,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,704 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,706 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,706 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:10:12] 2025-11-27 22:09:26,706 | INFO     | job 6898120445 has completed (purged errors)
[2025-11-27 17:10:12] 2025-11-27 22:09:26,706 | INFO     | overall cleanup function is called
[2025-11-27 17:10:12] 2025-11-27 22:09:27,718 | INFO     | --- collectZombieJob: --- 10, [13271]
[2025-11-27 17:10:12] 2025-11-27 22:09:27,719 | INFO     | zombie collector waiting for pid 13271
[2025-11-27 17:10:12] 2025-11-27 22:09:27,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:10:12] 2025-11-27 22:09:27,719 | INFO     | collected zombie processes
[2025-11-27 17:10:12] 2025-11-27 22:09:27,719 | INFO     | will attempt to kill all subprocesses of pid=13271
[2025-11-27 17:10:12] 2025-11-27 22:09:27,880 | INFO     | process IDs to be killed: [13271] (in reverse order)
[2025-11-27 17:10:12] 2025-11-27 22:09:27,944 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:10:12] 2025-11-27 22:09:27,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:10:12] 2025-11-27 22:09:27,950 | INFO     | did not find any defunct processes belonging to 13271
[2025-11-27 17:10:12] 2025-11-27 22:09:27,955 | INFO     | did not find any defunct processes belonging to 13271
[2025-11-27 17:10:12] 2025-11-27 22:09:27,957 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:10:12] 2025-11-27 22:09:27,957 | INFO     | ready for new job
[2025-11-27 17:10:12] 2025-11-27 22:09:27,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:10:12] 2025-11-27 22:09:27,962 | INFO     | ***************************************
[2025-11-27 17:10:12] 2025-11-27 22:09:27,962 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:10:12] 2025-11-27 22:09:27,963 | INFO     | ***************************************
[2025-11-27 17:10:12] 2025-11-27 22:09:27,963 | INFO     | 
[2025-11-27 17:10:12] 2025-11-27 22:09:27,964 | INFO     | architecture information:
[2025-11-27 17:10:12] 2025-11-27 22:09:27,965 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:10:12] 2025-11-27 22:09:27,981 | INFO     | cat /etc/os-release:
[2025-11-27 17:10:12] NAME="CentOS Linux"
[2025-11-27 17:10:12] VERSION="7 (Core)"
[2025-11-27 17:10:12] ID="centos"
[2025-11-27 17:10:12] ID_LIKE="rhel fedora"
[2025-11-27 17:10:12] VERSION_ID="7"
[2025-11-27 17:10:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:10:12] ANSI_COLOR="0;31"
[2025-11-27 17:10:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:10:12] HOME_URL="https://www.centos.org/"
[2025-11-27 17:10:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:10:12] 
[2025-11-27 17:10:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:10:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:10:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:10:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:10:12] 
[2025-11-27 17:10:12] 2025-11-27 22:09:27,982 | INFO     | ***************************************
[2025-11-27 17:10:12] 2025-11-27 22:09:28,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 17:10:12] 2025-11-27 22:09:28,499 | INFO     | sufficient remaining disk space (26234322944 B)
[2025-11-27 17:10:12] 2025-11-27 22:09:28,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:10:12] 2025-11-27 22:09:28,499 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:10:12] 2025-11-27 22:09:28,499 | INFO     | update_server=False
[2025-11-27 17:10:12] 2025-11-27 22:09:28,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:10:12] 2025-11-27 22:09:28,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:10:12] 2025-11-27 22:09:28,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:10:12] 2025-11-27 22:09:28,501 | INFO     | aborting loop
[2025-11-27 17:10:12] 2025-11-27 22:09:28,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:10:12] 2025-11-27 22:09:29,135 | INFO     | all data control threads have been joined
[2025-11-27 17:10:12] 2025-11-27 22:09:29,505 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:29,505 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:29,506 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:29,540 | INFO     | all payload control threads have been joined
[2025-11-27 17:10:12] 2025-11-27 22:09:29,647 | INFO     | all job control threads have been joined
[2025-11-27 17:10:12] 2025-11-27 22:09:29,715 | INFO     | [job] validate thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:29,757 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:29,824 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:29,843 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:29,899 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:30,140 | INFO     | [data] control thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:30,545 | INFO     | [payload] control thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:30,573 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:30,653 | INFO     | [job] control thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:30,794 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:30,802 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:30,984 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:31,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:10:12] 2025-11-27 22:09:35,711 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:10:12] 2025-11-27 22:09:58,179 | INFO     | PID=6746 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 17:10:12] 2025-11-27 22:09:58,180 | INFO     | .. there are 3 such processes running
[2025-11-27 17:10:12] 2025-11-27 22:09:58,181 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:10:12] 2025-11-27 22:09:58,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:10:12] 2025-11-27 22:09:58,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:10:12] 2025-11-27 22:10:06,656 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:10:12] 2025-11-27 22:10:07,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499909793600)>', '<ExcThread(monitor, started 140499243493120)>']
[2025-11-27 17:10:12] 2025-11-27 22:10:07,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:10:12] 2025-11-27 22:10:07,227 | INFO     | [monitor] control thread has ended
[2025-11-27 17:10:12] 2025-11-27 22:10:12,145 | INFO     | all workflow threads have been joined
[2025-11-27 17:10:12] 2025-11-27 22:10:12,151 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:10:12] 2025-11-27 22:10:12,152 | INFO     | traces error code: 0
[2025-11-27 17:10:12] 2025-11-27 22:10:12,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:10:12] 2025-11-27 22:10:12,341 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:10:12] 2025-11-27 22:10:12,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:10:12] 2025-11-27 22:10:12,350 [wrapper] pilotpid: 6746
[2025-11-27 17:10:12] 2025-11-27 22:10:12,353 [wrapper] Pilot exit status: 0
[2025-11-27 17:10:12] 2025-11-27 22:10:12,362 [wrapper] pandaids: 6898120445
[2025-11-27 17:10:12] 2025-11-27 22:10:12,392 [wrapper] cleanup supervisor_pilot  6569 6747
[2025-11-27 17:10:12] 2025-11-27 22:10:12,395 [wrapper] Test setup, not cleaning
[2025-11-27 17:10:12] 2025-11-27 22:10:12,397 [wrapper] apfmon messages muted
[2025-11-27 17:10:12] 2025-11-27 22:10:12,399 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:10:12] 2025-11-27 22:10:12,401 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:10:12]  *** Error codes and diagnostics ***
[2025-11-27 17:10:12]     "exeErrorCode": 0,
[2025-11-27 17:10:12]     "exeErrorDiag": "",
[2025-11-27 17:10:12]     "pilotErrorCode": 0,
[2025-11-27 17:10:12]     "pilotErrorDiag": "",
[2025-11-27 17:10:12]  *** Listing of results directory ***
[2025-11-27 17:10:12] total 1325404
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 22:33 queuedata.json
[2025-11-27 17:10:12] -rwx------ 1 boincer umatlas     36292 Nov 25 22:33 runpilot2-wrapper.sh
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas       100 Nov 26 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:10:12] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 21:41 run_atlas
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas       105 Nov 26 21:41 job.xml
[2025-11-27 17:10:12] -rw-r--r-- 2 boincer umatlas 411987929 Nov 26 21:41 EVNT.47483658._002428.pool.root.1
[2025-11-27 17:10:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:41 start_atlas.sh
[2025-11-27 17:10:12] drwxrwx--x 2 boincer umatlas      4096 Nov 26 21:41 shared
[2025-11-27 17:10:12] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 21:41 input.tar.gz
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas         0 Nov 26 21:41 boinc_lockfile
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 21:42 pandaJob.out
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas        57 Nov 26 21:42 setup.sh.local
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas    991554 Nov 26 21:42 agis_schedconf.cvmfs.json
[2025-11-27 17:10:12] drwx------ 5 boincer umatlas      4096 Nov 26 21:42 pilot3
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas       533 Nov 27 16:53 boinc_task_state.xml
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 17:03 init_data.xml
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas 917301078 Nov 27 17:08 HITS.47556161._004103.pool.root.1
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas      1068 Nov 27 17:09 memory_monitor_summary.json
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas   1516240 Nov 27 17:09 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas   2311613 Nov 27 17:09 log.47556161._004103.job.log.tgz.1
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas      8662 Nov 27 17:09 heartbeat.json
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas        95 Nov 27 17:09 pilot_heartbeat.json
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 17:10 boinc_mmap_file
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas        29 Nov 27 17:10 wrapper_checkpoint.txt
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas      4820 Nov 27 17:10 pilotlog.txt
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas   9691729 Nov 27 17:10 log.47556161._004103.job.log.1
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas       353 Nov 27 17:10 output.list
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas       620 Nov 27 17:10 runtime_log
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas  12021760 Nov 27 17:10 result.tar.gz
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 17:10 runtime_log.err
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas       668 Nov 27 17:10 BVRKDmrSLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcpMKDmWWm09m.diag
[2025-11-27 17:10:12] -rw-r--r-- 1 boincer umatlas     21089 Nov 27 17:10 stderr.txt
[2025-11-27 17:10:12] HITS file was successfully produced:
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas 917301078 Nov 27 17:08 shared/HITS.pool.root.1
[2025-11-27 17:10:12]  *** Contents of shared directory: ***
[2025-11-27 17:10:12] total 1310476
[2025-11-27 17:10:12] -rw-r--r-- 2 boincer umatlas 411987929 Nov 26 21:41 ATLAS.root_0
[2025-11-27 17:10:12] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:41 start_atlas.sh
[2025-11-27 17:10:12] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 21:41 input.tar.gz
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas 917301078 Nov 27 17:08 HITS.pool.root.1
[2025-11-27 17:10:12] -rw------- 1 boincer umatlas  12021760 Nov 27 17:10 result.tar.gz
17:10:13 (2771): run_atlas exited; CPU time 537032.173675
17:10:13 (2771): called boinc_finish(0)

</stderr_txt>
]]>

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