Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:55 (3654890): wrapper (7.7.26015): starting
22:53:55 (3654890): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 22:53:55] Arguments: --nthreads 9
[2025-11-26 22:53:55] Threads: 9
[2025-11-26 22:53:55] Checking for CVMFS
[2025-11-26 22:53:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:53:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:53:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:53:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:53:56] 2.13.3.0 7314 30915 261372 153345 3 664 30056660 40960001 66433 16776704 0 458296390 99.749 291380329 50426 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 22:53:56] CVMFS is ok
[2025-11-26 22:53:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:53:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:53:56] Further information can be found at the LHC@home message board.
[2025-11-26 22:53:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:53:56] Checking for apptainer binary...
[2025-11-26 22:53:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:53:56] Running /usr/bin/apptainer --version
[2025-11-26 22:53:56] apptainer version 1.4.4-1.el9
[2025-11-26 22:53:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:53:57] c8-16-1.aglt2.org
[2025-11-26 22:53:57] apptainer works
[2025-11-26 22:53:57] Set ATHENA_PROC_NUMBER=9
[2025-11-26 22:53:57] Set ATHENA_CORE_NUMBER=9
[2025-11-26 22:53:57] Starting ATLAS job with PandaID=6897487738
[2025-11-26 22:53:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:48:16]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:48:16] 2025-11-27 13:47:28,452 | INFO     | time since job start (35551s) is within the limit (172800.0s)
[2025-11-27 08:48:16] 2025-11-27 13:47:30,459 | INFO     | time since job start (35553s) is within the limit (172800.0s)
[2025-11-27 08:48:16] 2025-11-27 13:47:30,649 | INFO     | monitor loop #2148: job 0:6897487738 is in state 'finished'
[2025-11-27 08:48:16] 2025-11-27 13:47:30,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:48:16] 2025-11-27 13:47:32,465 | INFO     | time since job start (35555s) is within the limit (172800.0s)
[2025-11-27 08:48:16] 2025-11-27 13:47:33,155 | INFO     | monitor loop #2149: job 0:6897487738 is in state 'finished'
[2025-11-27 08:48:16] 2025-11-27 13:47:33,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:48:16] 2025-11-27 13:47:34,472 | INFO     | time since job start (35557s) is within the limit (172800.0s)
[2025-11-27 08:48:16] 2025-11-27 13:47:35,664 | INFO     | monitor loop #2150: job 0:6897487738 is in state 'finished'
[2025-11-27 08:48:16] 2025-11-27 13:47:35,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:48:16] 2025-11-27 13:47:36,479 | INFO     | time since job start (35559s) is within the limit (172800.0s)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,184 | INFO     | monitor loop #2151: job 0:6897487738 is in state 'finished'
[2025-11-27 08:48:16] 2025-11-27 13:47:38,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,256 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 08:48:16] 2025-11-27 13:47:38,261 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.8010156249998
[2025-11-27 08:48:16] 2025-11-27 13:47:38,285 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6897487738/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,285 | INFO     | extracted standard info from prmon json
[2025-11-27 08:48:16] 2025-11-27 13:47:38,285 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:48:16] 2025-11-27 13:47:38,285 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:48:16] 2025-11-27 13:47:38,296 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:48:16] 2025-11-27 13:47:38,296 | INFO     | sum of square deviations: 60810949836.91226
[2025-11-27 08:48:16] 2025-11-27 13:47:38,300 | INFO     | sum of deviations: 735659276878.9822
[2025-11-27 08:48:16] 2025-11-27 13:47:38,300 | INFO     | mean x: 1764233519.3666093
[2025-11-27 08:48:16] 2025-11-27 13:47:38,300 | INFO     | mean y: 2926403.432013769
[2025-11-27 08:48:16] 2025-11-27 13:47:38,301 | INFO     | intersect: -21339854108.69035
[2025-11-27 08:48:16] 2025-11-27 13:47:38,301 | INFO     | chi2: 24.02119759295007
[2025-11-27 08:48:16] 2025-11-27 13:47:38,301 | INFO     | sum of square deviations: 59254586067.49331
[2025-11-27 08:48:16] 2025-11-27 13:47:38,305 | INFO     | sum of deviations: 936185171831.2966
[2025-11-27 08:48:16] 2025-11-27 13:47:38,305 | INFO     | mean x: 1764233366.8784723
[2025-11-27 08:48:16] 2025-11-27 13:47:38,305 | INFO     | mean y: 2946047.2899305555
[2025-11-27 08:48:16] 2025-11-27 13:47:38,305 | INFO     | intersect: -27870830943.411446
[2025-11-27 08:48:16] 2025-11-27 13:47:38,306 | INFO     | chi2: 20.638298901055087
[2025-11-27 08:48:16] 2025-11-27 13:47:38,306 | INFO     | current chi2=20.638298901055087 (change=14.082972669471827 %)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,306 | INFO     | right removable region: 575
[2025-11-27 08:48:16] 2025-11-27 13:47:38,306 | INFO     | sum of square deviations: 59254101727.49334
[2025-11-27 08:48:16] 2025-11-27 13:47:38,310 | INFO     | sum of deviations: 490502014968.9502
[2025-11-27 08:48:16] 2025-11-27 13:47:38,310 | INFO     | mean x: 1764233671.8784723
[2025-11-27 08:48:16] 2025-11-27 13:47:38,310 | INFO     | mean y: 2950415.8993055555
[2025-11-27 08:48:16] 2025-11-27 13:47:38,310 | INFO     | intersect: -14601273523.098349
[2025-11-27 08:48:16] 2025-11-27 13:47:38,311 | INFO     | chi2: 19.2834792254158
[2025-11-27 08:48:16] 2025-11-27 13:47:38,311 | INFO     | current chi2=19.2834792254158 (change=19.723073128230432 %)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,311 | INFO     | left removable region: 10
[2025-11-27 08:48:16] 2025-11-27 13:47:38,311 | INFO     | sum of square deviations: 55923594670.18395
[2025-11-27 08:48:16] 2025-11-27 13:47:38,315 | INFO     | sum of deviations: 519398891786.8486
[2025-11-27 08:48:16] 2025-11-27 13:47:38,315 | INFO     | mean x: 1764233641.4053097
[2025-11-27 08:48:16] 2025-11-27 13:47:38,315 | INFO     | mean y: 2996609.7168141594
[2025-11-27 08:48:16] 2025-11-27 13:47:38,315 | INFO     | intersect: -16382591684.512558
[2025-11-27 08:48:16] 2025-11-27 13:47:38,315 | INFO     | chi2: 11.556478634660136
[2025-11-27 08:48:16] 2025-11-27 13:47:38,315 | INFO     | current memory leak: 9.29 B/s (using 565 data points, chi2=11.56)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | could have reported an average CPU frequency of 3796 MHz (23 samples)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | ..............................
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . Timing measurements:
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . get job = 0 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . initial setup = 3 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . payload setup = 42 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . stage-in = 0 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . payload execution = 35417 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . stage-out = 6 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | . log creation = 1 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,316 | INFO     | ..............................
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | 
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | job summary report
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | --------------------------------------------------
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | PanDA job id: 6897487738
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | task id: 47556161
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | errors: (none)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | pilot state: finished 
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | transexitcode: 0
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | exeerrorcode: 0
[2025-11-27 08:48:16] 2025-11-27 13:47:38,452 | INFO     | exeerrordiag: 
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | exitcode: 0
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | exitmsg: OK
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | cpuconsumptiontime: 139662 s
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | nevents: 1000
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | neventsw: 0
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | pid: 3713587
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | pgrp: 3713587
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | corecount: 9
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | event service: False
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | sizes: {0: 2284038, 1: 2284293, 12: 2284293, 23: 2284321, 26: 2284611, 34: 2284639, 35463: 2325954, 35464: 2325953, 35472: 2335059, 35504: 2335249}
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | --------------------------------------------------
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | 
[2025-11-27 08:48:16] 2025-11-27 13:47:38,453 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 08:48:16] 2025-11-27 13:47:38,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:48:16] 2025-11-27 13:47:38,544 | INFO     | job 6897487738 has completed (purged errors)
[2025-11-27 08:48:16] 2025-11-27 13:47:38,544 | INFO     | overall cleanup function is called
[2025-11-27 08:48:16] 2025-11-27 13:47:39,608 | INFO     | --- collectZombieJob: --- 10, [3713587]
[2025-11-27 08:48:16] 2025-11-27 13:47:39,608 | INFO     | zombie collector waiting for pid 3713587
[2025-11-27 08:48:16] 2025-11-27 13:47:39,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:48:16] 2025-11-27 13:47:39,608 | INFO     | collected zombie processes
[2025-11-27 08:48:16] 2025-11-27 13:47:39,608 | INFO     | will attempt to kill all subprocesses of pid=3713587
[2025-11-27 08:48:16] 2025-11-27 13:47:40,798 | INFO     | PID=3675466 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:48:16] 2025-11-27 13:47:40,798 | INFO     | .. there are 94 such processes running
[2025-11-27 08:48:16] 2025-11-27 13:47:41,802 | INFO     | process IDs to be killed: [3713587] (in reverse order)
[2025-11-27 08:48:16] 2025-11-27 13:47:42,093 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:48:16] 2025-11-27 13:47:42,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:48:16] 2025-11-27 13:47:42,171 | INFO     | did not find any defunct processes belonging to 3713587
[2025-11-27 08:48:16] 2025-11-27 13:47:42,201 | INFO     | did not find any defunct processes belonging to 3713587
[2025-11-27 08:48:16] 2025-11-27 13:47:42,202 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:48:16] 2025-11-27 13:47:42,202 | INFO     | ready for new job
[2025-11-27 08:48:16] 2025-11-27 13:47:42,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:48:16] 2025-11-27 13:47:42,205 | INFO     | ***************************************
[2025-11-27 08:48:16] 2025-11-27 13:47:42,205 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:48:16] 2025-11-27 13:47:42,205 | INFO     | ***************************************
[2025-11-27 08:48:16] 2025-11-27 13:47:42,205 | INFO     | 
[2025-11-27 08:48:16] 2025-11-27 13:47:42,210 | INFO     | architecture information:
[2025-11-27 08:48:16] 2025-11-27 13:47:42,218 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:48:16] 2025-11-27 13:47:42,352 | INFO     | cat /etc/os-release:
[2025-11-27 08:48:16] NAME="CentOS Linux"
[2025-11-27 08:48:16] VERSION="7 (Core)"
[2025-11-27 08:48:16] ID="centos"
[2025-11-27 08:48:16] ID_LIKE="rhel fedora"
[2025-11-27 08:48:16] VERSION_ID="7"
[2025-11-27 08:48:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:48:16] ANSI_COLOR="0;31"
[2025-11-27 08:48:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:48:16] HOME_URL="https://www.centos.org/"
[2025-11-27 08:48:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:48:16] 
[2025-11-27 08:48:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:48:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:48:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:48:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:48:16] 
[2025-11-27 08:48:16] 2025-11-27 13:47:42,353 | INFO     | ***************************************
[2025-11-27 08:48:16] 2025-11-27 13:47:42,856 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 08:48:16] 2025-11-27 13:47:42,962 | INFO     | sufficient remaining disk space (159854362624 B)
[2025-11-27 08:48:16] 2025-11-27 13:47:42,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:48:16] 2025-11-27 13:47:42,962 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:48:16] 2025-11-27 13:47:42,962 | INFO     | update_server=False
[2025-11-27 08:48:16] 2025-11-27 13:47:42,962 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:48:16] 2025-11-27 13:47:42,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:48:16] 2025-11-27 13:47:43,019 | INFO     | all job control threads have been joined
[2025-11-27 08:48:16] 2025-11-27 13:47:43,199 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 08:48:16] 2025-11-27 13:47:43,199 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 08:48:16] 2025-11-27 13:47:43,200 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:48:16] 2025-11-27 13:47:43,200 | INFO     | will abort loop
[2025-11-27 08:48:16] 2025-11-27 13:47:43,306 | INFO     | all data control threads have been joined
[2025-11-27 08:48:16] 2025-11-27 13:47:43,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:48:16] 2025-11-27 13:47:43,972 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:43,989 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,026 | INFO     | [job] control thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,208 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,294 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,312 | INFO     | [data] control thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,337 | INFO     | all payload control threads have been joined
[2025-11-27 08:48:16] 2025-11-27 13:47:44,505 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,806 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,979 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:44,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:48:16] 2025-11-27 13:47:45,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:45,203 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:45,213 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:45,343 | INFO     | [payload] control thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:45,454 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:45,460 | INFO     | [job] validate thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:49,016 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:48:16] 2025-11-27 13:47:58,330 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:48:16] 2025-11-27 13:47:58,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201038251840)>', '<ExcThread(monitor, started 140200407721728)>']
[2025-11-27 08:48:16] 2025-11-27 13:48:03,849 | INFO     | all workflow threads have been joined
[2025-11-27 08:48:16] 2025-11-27 13:48:03,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:48:16] 2025-11-27 13:48:03,849 | INFO     | traces error code: 0
[2025-11-27 08:48:16] 2025-11-27 13:48:03,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:48:16] 2025-11-27 13:48:15,562 | INFO     | PID=3675466 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:48:16] 2025-11-27 13:48:15,563 | INFO     | .. there are 93 such processes running
[2025-11-27 08:48:16] 2025-11-27 13:48:15,564 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:48:16] 2025-11-27 13:48:15,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:48:16] 2025-11-27 13:48:15,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:48:16] 2025-11-27 13:48:15,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:48:16] 2025-11-27 13:48:15,564 | INFO     | [monitor] control thread has ended
[2025-11-27 08:48:16] 2025-11-27 13:48:15,843 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:48:16] 2025-11-27 13:48:15,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:48:16] 2025-11-27 13:48:15,883 [wrapper] pilotpid: 3675466
[2025-11-27 08:48:16] 2025-11-27 13:48:15,898 [wrapper] Pilot exit status: 0
[2025-11-27 08:48:16] 2025-11-27 13:48:16,012 [wrapper] pandaids: 6897487738
[2025-11-27 08:48:16] 2025-11-27 13:48:16,280 [wrapper] cleanup supervisor_pilot 1906135 3675467
[2025-11-27 08:48:16] 2025-11-27 13:48:16,330 [wrapper] Test setup, not cleaning
[2025-11-27 08:48:16] 2025-11-27 13:48:16,343 [wrapper] apfmon messages muted
[2025-11-27 08:48:16] 2025-11-27 13:48:16,380 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:48:16] 2025-11-27 13:48:16,417 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:48:16]  *** Error codes and diagnostics ***
[2025-11-27 08:48:16]     "exeErrorCode": 0,
[2025-11-27 08:48:16]     "exeErrorDiag": "",
[2025-11-27 08:48:16]     "pilotErrorCode": 0,
[2025-11-27 08:48:16]     "pilotErrorDiag": "",
[2025-11-27 08:48:16]  *** Listing of results directory ***
[2025-11-27 08:48:16] total 1316508
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 08:48:16] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas       100 Nov 26 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:48:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 22:53 run_atlas
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas       105 Nov 26 22:53 job.xml
[2025-11-27 08:48:16] -rw-r--r--. 2 boincer umatlas 407481119 Nov 26 22:53 EVNT.47483658._002251.pool.root.1
[2025-11-27 08:48:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:53 start_atlas.sh
[2025-11-27 08:48:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 22:53 shared
[2025-11-27 08:48:16] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 22:53 input.tar.gz
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas         0 Nov 26 22:53 boinc_lockfile
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 22:53 pandaJob.out
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas        57 Nov 26 22:53 setup.sh.local
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas    991546 Nov 26 22:54 agis_schedconf.cvmfs.json
[2025-11-27 08:48:16] drwx------. 5 boincer umatlas      4096 Nov 26 22:54 pilot3
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas       533 Nov 27 08:30 boinc_task_state.xml
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 08:39 init_data.xml
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas 923782728 Nov 27 08:46 HITS.47556161._002344.pool.root.1
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas      1053 Nov 27 08:46 memory_monitor_summary.json
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas   1516240 Nov 27 08:47 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas   1920694 Nov 27 08:47 log.47556161._002344.job.log.tgz.1
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas      8581 Nov 27 08:47 heartbeat.json
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 08:48 boinc_mmap_file
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas        29 Nov 27 08:48 wrapper_checkpoint.txt
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas        95 Nov 27 08:48 pilot_heartbeat.json
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas       823 Nov 27 08:48 pilotlog.txt
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas   4541097 Nov 27 08:48 log.47556161._002344.job.log.1
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas       353 Nov 27 08:48 output.list
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas       620 Nov 27 08:48 runtime_log
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas   6481920 Nov 27 08:48 result.tar.gz
[2025-11-27 08:48:16] -rw-------. 1 boincer umatlas       659 Nov 27 08:48 w2MMDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmybJKDmMF1HTo.diag
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 08:48 runtime_log.err
[2025-11-27 08:48:16] -rw-r--r--. 1 boincer umatlas     21851 Nov 27 08:48 stderr.txt
[2025-11-27 08:48:17] HITS file was successfully produced:
[2025-11-27 08:48:17] -rw-------. 1 boincer umatlas 923782728 Nov 27 08:46 shared/HITS.pool.root.1
[2025-11-27 08:48:17]  *** Contents of shared directory: ***
[2025-11-27 08:48:17] total 1307000
[2025-11-27 08:48:17] -rw-r--r--. 2 boincer umatlas 407481119 Nov 26 22:53 ATLAS.root_0
[2025-11-27 08:48:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:53 start_atlas.sh
[2025-11-27 08:48:17] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 22:53 input.tar.gz
[2025-11-27 08:48:17] -rw-------. 1 boincer umatlas 923782728 Nov 27 08:46 HITS.pool.root.1
[2025-11-27 08:48:17] -rw-------. 1 boincer umatlas   6481920 Nov 27 08:48 result.tar.gz
08:48:18 (3654890): run_atlas exited; CPU time 140558.624591
08:48:18 (3654890): called boinc_finish(0)

</stderr_txt>
]]>

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