Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:49:55 (21419): wrapper (7.7.26015): starting
21:49:55 (21419): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:49:55] Arguments: --nthreads 8
[2025-11-26 21:49:55] Threads: 8
[2025-11-26 21:49:55] Checking for CVMFS
[2025-11-26 21:49:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:49:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:49:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:49:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:49:55] 2.11.2.0 2822 74160 84956 153343 3 81 11603589 20275201 1 130560 0 21061540 99.848 4727884 32471 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:49:55] CVMFS is ok
[2025-11-26 21:49:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:49:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:49:55] Further information can be found at the LHC@home message board.
[2025-11-26 21:49:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:49:55] Checking for apptainer binary...
[2025-11-26 21:49:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:49:55] Running /usr/bin/apptainer --version
[2025-11-26 21:49:55] apptainer version 1.3.2-1.el7
[2025-11-26 21:49:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:49:57] c-204-37.aglt2.org
[2025-11-26 21:49:57] apptainer works
[2025-11-26 21:49:57] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:49:57] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:49:57] Starting ATLAS job with PandaID=6897394454
[2025-11-26 21:49:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:24:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:24:36] 2025-11-27 15:23:27,695 | INFO     | time since job start (45192s) is within the limit (172800.0s)
[2025-11-27 10:24:36] 2025-11-27 15:23:27,959 | INFO     | monitor loop #3291: job 0:6897394454 is in state 'finished'
[2025-11-27 10:24:36] 2025-11-27 15:23:27,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,225 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 10:24:36] 2025-11-27 15:23:29,228 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-27 10:24:36] 2025-11-27 15:23:29,230 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897394454/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,230 | INFO     | extracted standard info from prmon json
[2025-11-27 10:24:36] 2025-11-27 15:23:29,230 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:24:36] 2025-11-27 15:23:29,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:24:36] 2025-11-27 15:23:29,242 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:24:36] 2025-11-27 15:23:29,243 | INFO     | sum of square deviations: 126163243347.63568
[2025-11-27 10:24:36] 2025-11-27 15:23:29,254 | INFO     | sum of deviations: 866125791492.2883
[2025-11-27 10:24:36] 2025-11-27 15:23:29,255 | INFO     | mean x: 1764234420.5870445
[2025-11-27 10:24:36] 2025-11-27 15:23:29,255 | INFO     | mean y: 2865172.9257759782
[2025-11-27 10:24:36] 2025-11-27 15:23:29,255 | INFO     | intersect: -12108815641.259068
[2025-11-27 10:24:36] 2025-11-27 15:23:29,256 | INFO     | chi2: 6.494862773736973
[2025-11-27 10:24:36] 2025-11-27 15:23:29,257 | INFO     | sum of square deviations: 123626658690.90077
[2025-11-27 10:24:36] 2025-11-27 15:23:29,267 | INFO     | sum of deviations: 1130555266032.5059
[2025-11-27 10:24:36] 2025-11-27 15:23:29,268 | INFO     | mean x: 1764234268.0910325
[2025-11-27 10:24:36] 2025-11-27 15:23:29,268 | INFO     | mean y: 2881070.410326087
[2025-11-27 10:24:36] 2025-11-27 15:23:29,268 | INFO     | intersect: -16130891074.093369
[2025-11-27 10:24:36] 2025-11-27 15:23:29,269 | INFO     | chi2: 2.9573970530180476
[2025-11-27 10:24:36] 2025-11-27 15:23:29,269 | INFO     | current chi2=2.9573970530180476 (change=54.46559602495744 %)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,270 | INFO     | sum of square deviations: 121124307234.14201
[2025-11-27 10:24:36] 2025-11-27 15:23:29,280 | INFO     | sum of deviations: 1188544408093.2522
[2025-11-27 10:24:36] 2025-11-27 15:23:29,281 | INFO     | mean x: 1764234115.5950751
[2025-11-27 10:24:36] 2025-11-27 15:23:29,281 | INFO     | mean y: 2884592.1258549932
[2025-11-27 10:24:36] 2025-11-27 15:23:29,281 | INFO     | intersect: -17308839541.036526
[2025-11-27 10:24:36] 2025-11-27 15:23:29,282 | INFO     | chi2: 2.5707598360640813
[2025-11-27 10:24:36] 2025-11-27 15:23:29,282 | INFO     | current chi2=2.5707598360640813 (change=13.073564692958623 %)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,282 | INFO     | right removable region: 730
[2025-11-27 10:24:36] 2025-11-27 15:23:29,283 | INFO     | sum of square deviations: 123626393340.90085
[2025-11-27 10:24:36] 2025-11-27 15:23:29,294 | INFO     | sum of deviations: 659578904085.7917
[2025-11-27 10:24:36] 2025-11-27 15:23:29,294 | INFO     | mean x: 1764234573.0910325
[2025-11-27 10:24:36] 2025-11-27 15:23:29,294 | INFO     | mean y: 2877568.2866847827
[2025-11-27 10:24:36] 2025-11-27 15:23:29,294 | INFO     | intersect: -9409771905.850021
[2025-11-27 10:24:36] 2025-11-27 15:23:29,295 | INFO     | chi2: 4.131360534803505
[2025-11-27 10:24:36] 2025-11-27 15:23:29,295 | INFO     | current chi2=4.131360534803505 (change=36.39033373408089 %)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,296 | INFO     | sum of square deviations: 121123821430.33101
[2025-11-27 10:24:36] 2025-11-27 15:23:29,307 | INFO     | sum of deviations: 616949031238.8661
[2025-11-27 10:24:36] 2025-11-27 15:23:29,307 | INFO     | mean x: 1764234725.5937073
[2025-11-27 10:24:36] 2025-11-27 15:23:29,307 | INFO     | mean y: 2880164.70998632
[2025-11-27 10:24:36] 2025-11-27 15:23:29,307 | INFO     | intersect: -8983320006.154537
[2025-11-27 10:24:36] 2025-11-27 15:23:29,308 | INFO     | chi2: 4.093834883348353
[2025-11-27 10:24:36] 2025-11-27 15:23:29,308 | INFO     | current chi2=4.093834883348353 (change=0.9083121925338647 %)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,308 | INFO     | left removable region: 20
[2025-11-27 10:24:36] 2025-11-27 15:23:29,309 | INFO     | sum of square deviations: 110982037215.86453
[2025-11-27 10:24:36] 2025-11-27 15:23:29,319 | INFO     | sum of deviations: 881330383803.5662
[2025-11-27 10:24:36] 2025-11-27 15:23:29,319 | INFO     | mean x: 1764234695.1070423
[2025-11-27 10:24:36] 2025-11-27 15:23:29,319 | INFO     | mean y: 2903386.926760563
[2025-11-27 10:24:36] 2025-11-27 15:23:29,319 | INFO     | intersect: -14007234469.291948
[2025-11-27 10:24:36] 2025-11-27 15:23:29,320 | INFO     | chi2: 0.12599977213917
[2025-11-27 10:24:36] 2025-11-27 15:23:29,320 | INFO     | current memory leak: 7.94 B/s (using 710 data points, chi2=0.13)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,321 | INFO     | could have reported an average CPU frequency of 2179 MHz (28 samples)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,321 | INFO     | ..............................
[2025-11-27 10:24:36] 2025-11-27 15:23:29,321 | INFO     | . Timing measurements:
[2025-11-27 10:24:36] 2025-11-27 15:23:29,321 | INFO     | . get job = 0 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,321 | INFO     | . initial setup = 2 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,321 | INFO     | . payload setup = 10 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,322 | INFO     | . stage-in = 0 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,322 | INFO     | . payload execution = 45149 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,322 | INFO     | . stage-out = 3 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,322 | INFO     | . log creation = 0 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,322 | INFO     | ..............................
[2025-11-27 10:24:36] 2025-11-27 15:23:29,411 | INFO     | 
[2025-11-27 10:24:36] 2025-11-27 15:23:29,411 | INFO     | job summary report
[2025-11-27 10:24:36] 2025-11-27 15:23:29,411 | INFO     | --------------------------------------------------
[2025-11-27 10:24:36] 2025-11-27 15:23:29,411 | INFO     | PanDA job id: 6897394454
[2025-11-27 10:24:36] 2025-11-27 15:23:29,412 | INFO     | task id: 47556161
[2025-11-27 10:24:36] 2025-11-27 15:23:29,412 | INFO     | errors: (none)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:24:36] 2025-11-27 15:23:29,412 | INFO     | pilot state: finished 
[2025-11-27 10:24:36] 2025-11-27 15:23:29,412 | INFO     | transexitcode: 0
[2025-11-27 10:24:36] 2025-11-27 15:23:29,412 | INFO     | exeerrorcode: 0
[2025-11-27 10:24:36] 2025-11-27 15:23:29,413 | INFO     | exeerrordiag: 
[2025-11-27 10:24:36] 2025-11-27 15:23:29,413 | INFO     | exitcode: 0
[2025-11-27 10:24:36] 2025-11-27 15:23:29,413 | INFO     | exitmsg: OK
[2025-11-27 10:24:36] 2025-11-27 15:23:29,413 | INFO     | cpuconsumptiontime: 351308 s
[2025-11-27 10:24:36] 2025-11-27 15:23:29,413 | INFO     | nevents: 1000
[2025-11-27 10:24:36] 2025-11-27 15:23:29,413 | INFO     | neventsw: 0
[2025-11-27 10:24:36] 2025-11-27 15:23:29,414 | INFO     | pid: 32702
[2025-11-27 10:24:36] 2025-11-27 15:23:29,414 | INFO     | pgrp: 32702
[2025-11-27 10:24:36] 2025-11-27 15:23:29,414 | INFO     | corecount: 8
[2025-11-27 10:24:36] 2025-11-27 15:23:29,414 | INFO     | event service: False
[2025-11-27 10:24:36] 2025-11-27 15:23:29,414 | INFO     | sizes: {0: 2284094, 1: 2284293, 7: 2284555, 12: 2284583, 45160: 2330537, 45164: 2339531, 45167: 2339715, 45175: 2339961}
[2025-11-27 10:24:36] 2025-11-27 15:23:29,415 | INFO     | --------------------------------------------------
[2025-11-27 10:24:36] 2025-11-27 15:23:29,415 | INFO     | 
[2025-11-27 10:24:36] 2025-11-27 15:23:29,415 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 10:24:36] 2025-11-27 15:23:29,446 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,446 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,446 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,446 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:24:36] 2025-11-27 15:23:29,449 | INFO     | job 6897394454 has completed (purged errors)
[2025-11-27 10:24:36] 2025-11-27 15:23:29,450 | INFO     | overall cleanup function is called
[2025-11-27 10:24:36] 2025-11-27 15:23:30,465 | INFO     | --- collectZombieJob: --- 10, [32702]
[2025-11-27 10:24:36] 2025-11-27 15:23:30,465 | INFO     | zombie collector waiting for pid 32702
[2025-11-27 10:24:36] 2025-11-27 15:23:30,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:24:36] 2025-11-27 15:23:30,466 | INFO     | collected zombie processes
[2025-11-27 10:24:36] 2025-11-27 15:23:30,466 | INFO     | will attempt to kill all subprocesses of pid=32702
[2025-11-27 10:24:36] 2025-11-27 15:23:30,556 | INFO     | process IDs to be killed: [32702] (in reverse order)
[2025-11-27 10:24:36] 2025-11-27 15:23:30,613 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:24:36] 2025-11-27 15:23:30,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:24:36] 2025-11-27 15:23:30,618 | INFO     | did not find any defunct processes belonging to 32702
[2025-11-27 10:24:36] 2025-11-27 15:23:30,621 | INFO     | did not find any defunct processes belonging to 32702
[2025-11-27 10:24:36] 2025-11-27 15:23:30,623 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:24:36] 2025-11-27 15:23:30,623 | INFO     | ready for new job
[2025-11-27 10:24:36] 2025-11-27 15:23:30,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:24:36] 2025-11-27 15:23:30,627 | INFO     | ***************************************
[2025-11-27 10:24:36] 2025-11-27 15:23:30,627 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:24:36] 2025-11-27 15:23:30,628 | INFO     | ***************************************
[2025-11-27 10:24:36] 2025-11-27 15:23:30,628 | INFO     | 
[2025-11-27 10:24:36] 2025-11-27 15:23:30,628 | INFO     | architecture information:
[2025-11-27 10:24:36] 2025-11-27 15:23:30,629 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:24:36] 2025-11-27 15:23:30,647 | INFO     | cat /etc/os-release:
[2025-11-27 10:24:36] NAME="CentOS Linux"
[2025-11-27 10:24:36] VERSION="7 (Core)"
[2025-11-27 10:24:36] ID="centos"
[2025-11-27 10:24:36] ID_LIKE="rhel fedora"
[2025-11-27 10:24:36] VERSION_ID="7"
[2025-11-27 10:24:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:24:36] ANSI_COLOR="0;31"
[2025-11-27 10:24:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:24:36] HOME_URL="https://www.centos.org/"
[2025-11-27 10:24:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:24:36] 
[2025-11-27 10:24:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:24:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:24:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:24:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:24:36] 
[2025-11-27 10:24:36] 2025-11-27 15:23:30,647 | INFO     | ***************************************
[2025-11-27 10:24:36] 2025-11-27 15:23:31,151 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 10:24:36] 2025-11-27 15:23:31,172 | INFO     | sufficient remaining disk space (17426284544 B)
[2025-11-27 10:24:36] 2025-11-27 15:23:31,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:24:36] 2025-11-27 15:23:31,172 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:24:36] 2025-11-27 15:23:31,173 | INFO     | update_server=False
[2025-11-27 10:24:36] 2025-11-27 15:23:31,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:24:36] 2025-11-27 15:23:31,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:24:36] 2025-11-27 15:23:31,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:24:36] 2025-11-27 15:23:31,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:24:36] 2025-11-27 15:23:31,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:24:36] 2025-11-27 15:23:31,468 | INFO     | aborting loop
[2025-11-27 10:24:36] 2025-11-27 15:23:31,970 | INFO     | all payload control threads have been joined
[2025-11-27 10:24:36] 2025-11-27 15:23:32,062 | INFO     | all data control threads have been joined
[2025-11-27 10:24:36] 2025-11-27 15:23:32,179 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:32,179 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:32,473 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:32,606 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:32,854 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:32,873 | INFO     | all job control threads have been joined
[2025-11-27 10:24:36] 2025-11-27 15:23:32,976 | INFO     | [payload] control thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,067 | INFO     | [data] control thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,121 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,154 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,180 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,221 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,526 | INFO     | [job] validate thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,634 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:33,874 | INFO     | [job] control thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:35,462 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:23:42,092 | INFO     | job.realtimelogging is not enabled
[2025-11-27 10:24:36] 2025-11-27 15:23:43,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:24:36] 2025-11-27 15:24:00,934 | INFO     | PID=26307 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 10:24:36] 2025-11-27 15:24:00,935 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:24:36] 2025-11-27 15:24:00,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:24:36] 2025-11-27 15:24:00,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:24:36] 2025-11-27 15:24:29,966 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:24:36] 2025-11-27 15:24:31,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139726688278336)>', '<ExcThread(monitor, started 139725864158976)>']
[2025-11-27 10:24:36] 2025-11-27 15:24:32,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:24:36] 2025-11-27 15:24:32,056 | INFO     | [monitor] control thread has ended
[2025-11-27 10:24:36] 2025-11-27 15:24:36,327 | INFO     | all workflow threads have been joined
[2025-11-27 10:24:36] 2025-11-27 15:24:36,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:24:36] 2025-11-27 15:24:36,330 | INFO     | traces error code: 0
[2025-11-27 10:24:36] 2025-11-27 15:24:36,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:24:36] 2025-11-27 15:24:36,473 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:24:36] 2025-11-27 15:24:36,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:24:36] 2025-11-27 15:24:36,483 [wrapper] pilotpid: 26307
[2025-11-27 10:24:36] 2025-11-27 15:24:36,488 [wrapper] Pilot exit status: 0
[2025-11-27 10:24:36] 2025-11-27 15:24:36,504 [wrapper] pandaids: 6897394454
[2025-11-27 10:24:36] 2025-11-27 15:24:36,556 [wrapper] cleanup supervisor_pilot  1203 26308
[2025-11-27 10:24:36] 2025-11-27 15:24:36,561 [wrapper] Test setup, not cleaning
[2025-11-27 10:24:36] 2025-11-27 15:24:36,566 [wrapper] apfmon messages muted
[2025-11-27 10:24:36] 2025-11-27 15:24:36,570 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:24:36] 2025-11-27 15:24:36,575 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:24:36]  *** Error codes and diagnostics ***
[2025-11-27 10:24:36]     "exeErrorCode": 0,
[2025-11-27 10:24:36]     "exeErrorDiag": "",
[2025-11-27 10:24:36]     "pilotErrorCode": 0,
[2025-11-27 10:24:36]     "pilotErrorDiag": "",
[2025-11-27 10:24:36]  *** Listing of results directory ***
[2025-11-27 10:24:36] total 1319656
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 10:24:36] -rwx------ 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas       100 Nov 26 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:24:36] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 21:49 run_atlas
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas       105 Nov 26 21:49 job.xml
[2025-11-27 10:24:36] -rw-r--r-- 2 boincer umatlas 409858160 Nov 26 21:49 EVNT.47483658._002218.pool.root.1
[2025-11-27 10:24:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:49 start_atlas.sh
[2025-11-27 10:24:36] drwxrwx--x 2 boincer umatlas      4096 Nov 26 21:49 shared
[2025-11-27 10:24:36] -rw-r--r-- 2 boincer umatlas    590106 Nov 26 21:49 input.tar.gz
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas         0 Nov 26 21:49 boinc_lockfile
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 21:49 pandaJob.out
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas        57 Nov 26 21:49 setup.sh.local
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas    991554 Nov 26 21:50 agis_schedconf.cvmfs.json
[2025-11-27 10:24:36] drwx------ 5 boincer umatlas      4096 Nov 26 21:50 pilot3
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas       532 Nov 27 10:14 boinc_task_state.xml
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 10:19 init_data.xml
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas 921221586 Nov 27 10:22 HITS.47556161._002012.pool.root.1
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas      1061 Nov 27 10:23 memory_monitor_summary.json
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas   1516240 Nov 27 10:23 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas   1983526 Nov 27 10:23 log.47556161._002012.job.log.tgz.1
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas      8661 Nov 27 10:23 heartbeat.json
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas        95 Nov 27 10:24 pilot_heartbeat.json
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 10:24 boinc_mmap_file
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas        29 Nov 27 10:24 wrapper_checkpoint.txt
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas      4818 Nov 27 10:24 pilotlog.txt
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas   6180216 Nov 27 10:24 log.47556161._002012.job.log.1
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas       353 Nov 27 10:24 output.list
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas       620 Nov 27 10:24 runtime_log
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas   8181760 Nov 27 10:24 result.tar.gz
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 10:24 runtime_log.err
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas       668 Nov 27 10:24 lIwKDm7WBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmaJKDmUwbfCn.diag
[2025-11-27 10:24:36] -rw-r--r-- 1 boincer umatlas     21290 Nov 27 10:24 stderr.txt
[2025-11-27 10:24:36] HITS file was successfully produced:
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas 921221586 Nov 27 10:22 shared/HITS.pool.root.1
[2025-11-27 10:24:36]  *** Contents of shared directory: ***
[2025-11-27 10:24:36] total 1308480
[2025-11-27 10:24:36] -rw-r--r-- 2 boincer umatlas 409858160 Nov 26 21:49 ATLAS.root_0
[2025-11-27 10:24:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:49 start_atlas.sh
[2025-11-27 10:24:36] -rw-r--r-- 2 boincer umatlas    590106 Nov 26 21:49 input.tar.gz
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas 921221586 Nov 27 10:22 HITS.pool.root.1
[2025-11-27 10:24:36] -rw------- 1 boincer umatlas   8181760 Nov 27 10:24 result.tar.gz
10:24:38 (21419): run_atlas exited; CPU time 347634.951822
10:24:38 (21419): called boinc_finish(0)

</stderr_txt>
]]>

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