Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:37:05 (2776466): wrapper (7.7.26015): starting
04:37:05 (2776466): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 04:37:05] Arguments: --nthreads 12
[2025-11-27 04:37:05] Threads: 12
[2025-11-27 04:37:05] Checking for CVMFS
[2025-11-27 04:37:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:37:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:37:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:37:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:37:05] 2.13.3.0 8990 7966 98008 153345 2 56 2175429 4097025 1044 130560 0 6097687 99.990 290125 2877 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.185.49.55:3128 1
[2025-11-27 04:37:05] CVMFS is ok
[2025-11-27 04:37:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:37:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:37:05] Further information can be found at the LHC@home message board.
[2025-11-27 04:37:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:37:05] Checking for apptainer binary...
[2025-11-27 04:37:05] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-27 04:37:05] apptainer is not installed, using version from CVMFS
[2025-11-27 04:37:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:37:06] pckelar2.cern.ch
[2025-11-27 04:37:06] apptainer works
[2025-11-27 04:37:06] Set ATHENA_PROC_NUMBER=12
[2025-11-27 04:37:06] Set ATHENA_CORE_NUMBER=12
[2025-11-27 04:37:06] Starting ATLAS job with PandaID=6897373288
[2025-11-27 04:37:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:00:51]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:00:51] 2025-11-27 16:00:17,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:00:51] 2025-11-27 16:00:18,362 | INFO     | time since job start (44580s) is within the limit (172800.0s)
[2025-11-27 17:00:51] 2025-11-27 16:00:18,900 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 17:00:51] 2025-11-27 16:00:18,906 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2841.6961250000004
[2025-11-27 17:00:51] 2025-11-27 16:00:18,911 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6897373288/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:00:51] 2025-11-27 16:00:18,912 | INFO     | extracted standard info from prmon json
[2025-11-27 17:00:51] 2025-11-27 16:00:18,913 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:00:51] 2025-11-27 16:00:18,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:00:51] 2025-11-27 16:00:18,934 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:00:51] 2025-11-27 16:00:18,935 | INFO     | sum of square deviations: 120627239213.95158
[2025-11-27 17:00:51] 2025-11-27 16:00:18,953 | INFO     | sum of deviations: 1472621457926.727
[2025-11-27 17:00:51] 2025-11-27 16:00:18,953 | INFO     | mean x: 1764236911.4726028
[2025-11-27 17:00:51] 2025-11-27 16:00:18,954 | INFO     | mean y: 3518278.78630137
[2025-11-27 17:00:51] 2025-11-27 16:00:18,954 | INFO     | intersect: -21534346217.083244
[2025-11-27 17:00:51] 2025-11-27 16:00:18,955 | INFO     | chi2: 5.667408434777791
[2025-11-27 17:00:51] 2025-11-27 16:00:18,956 | INFO     | sum of square deviations: 118165744486.68958
[2025-11-27 17:00:51] 2025-11-27 16:00:18,974 | INFO     | sum of deviations: 1732298781659.4756
[2025-11-27 17:00:51] 2025-11-27 16:00:18,974 | INFO     | mean x: 1764236758.9793103
[2025-11-27 17:00:51] 2025-11-27 16:00:18,974 | INFO     | mean y: 3534356.831724138
[2025-11-27 17:00:51] 2025-11-27 16:00:18,974 | INFO     | intersect: -25860011812.278023
[2025-11-27 17:00:51] 2025-11-27 16:00:18,975 | INFO     | chi2: 3.1681332837882303
[2025-11-27 17:00:51] 2025-11-27 16:00:18,976 | INFO     | current chi2=3.1681332837882303 (change=44.099083024489175 %)
[2025-11-27 17:00:51] 2025-11-27 16:00:18,977 | INFO     | sum of square deviations: 115737971321.86092
[2025-11-27 17:00:51] 2025-11-27 16:00:18,994 | INFO     | sum of deviations: 1826963791607.6243
[2025-11-27 17:00:51] 2025-11-27 16:00:18,994 | INFO     | mean x: 1764236606.4861112
[2025-11-27 17:00:51] 2025-11-27 16:00:18,994 | INFO     | mean y: 3540289.5125
[2025-11-27 17:00:51] 2025-11-27 16:00:18,995 | INFO     | intersect: -27845542972.15365
[2025-11-27 17:00:51] 2025-11-27 16:00:18,996 | INFO     | chi2: 2.6139221091393487
[2025-11-27 17:00:51] 2025-11-27 16:00:18,996 | INFO     | current chi2=2.6139221091393487 (change=17.493303627244966 %)
[2025-11-27 17:00:51] 2025-11-27 16:00:18,996 | INFO     | right removable region: 719
[2025-11-27 17:00:51] 2025-11-27 16:00:18,997 | INFO     | sum of square deviations: 118165355673.64708
[2025-11-27 17:00:51] 2025-11-27 16:00:19,015 | INFO     | sum of deviations: 1213529759414.8481
[2025-11-27 17:00:51] 2025-11-27 16:00:19,015 | INFO     | mean x: 1764237063.977931
[2025-11-27 17:00:51] 2025-11-27 16:00:19,015 | INFO     | mean y: 3534304.3655172414
[2025-11-27 17:00:51] 2025-11-27 16:00:19,015 | INFO     | intersect: -18114755676.607025
[2025-11-27 17:00:51] 2025-11-27 16:00:19,016 | INFO     | chi2: 3.2567696739683143
[2025-11-27 17:00:51] 2025-11-27 16:00:19,017 | INFO     | current chi2=3.2567696739683143 (change=42.53511615673758 %)
[2025-11-27 17:00:51] 2025-11-27 16:00:19,018 | INFO     | sum of square deviations: 115737370843.64456
[2025-11-27 17:00:51] 2025-11-27 16:00:19,035 | INFO     | sum of deviations: 1139637338808.9216
[2025-11-27 17:00:51] 2025-11-27 16:00:19,035 | INFO     | mean x: 1764237216.4777777
[2025-11-27 17:00:51] 2025-11-27 16:00:19,035 | INFO     | mean y: 3538944.2763888887
[2025-11-27 17:00:51] 2025-11-27 16:00:19,035 | INFO     | intersect: -17368469696.999916
[2025-11-27 17:00:51] 2025-11-27 16:00:19,036 | INFO     | chi2: 3.1763718968952044
[2025-11-27 17:00:51] 2025-11-27 16:00:19,036 | INFO     | current chi2=3.1763718968952044 (change=2.4686356457976557 %)
[2025-11-27 17:00:51] 2025-11-27 16:00:19,037 | INFO     | left removable region: 20
[2025-11-27 17:00:51] 2025-11-27 16:00:19,038 | INFO     | sum of square deviations: 105903280476.96414
[2025-11-27 17:00:51] 2025-11-27 16:00:19,054 | INFO     | sum of deviations: 1399581394148.3213
[2025-11-27 17:00:51] 2025-11-27 16:00:19,054 | INFO     | mean x: 1764237185.992847
[2025-11-27 17:00:51] 2025-11-27 16:00:19,054 | INFO     | mean y: 3568206.2646638053
[2025-11-27 17:00:51] 2025-11-27 16:00:19,054 | INFO     | intersect: -23311984713.904545
[2025-11-27 17:00:51] 2025-11-27 16:00:19,055 | INFO     | chi2: 0.05997265809726869
[2025-11-27 17:00:51] 2025-11-27 16:00:19,056 | INFO     | current memory leak: 13.22 B/s (using 699 data points, chi2=0.06)
[2025-11-27 17:00:51] 2025-11-27 16:00:19,057 | INFO     | could have reported an average CPU frequency of 2802 MHz (28 samples)
[2025-11-27 17:00:51] 2025-11-27 16:00:19,057 | INFO     | ..............................
[2025-11-27 17:00:51] 2025-11-27 16:00:19,057 | INFO     | . Timing measurements:
[2025-11-27 17:00:51] 2025-11-27 16:00:19,057 | INFO     | . get job = 0 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,057 | INFO     | . initial setup = 1 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,058 | INFO     | . payload setup = 10 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,058 | INFO     | . stage-in = 0 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,058 | INFO     | . payload execution = 44536 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,058 | INFO     | . stage-out = 2 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,058 | INFO     | . log creation = 0 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,058 | INFO     | ..............................
[2025-11-27 17:00:51] 2025-11-27 16:00:19,466 | INFO     | 
[2025-11-27 17:00:51] 2025-11-27 16:00:19,466 | INFO     | job summary report
[2025-11-27 17:00:51] 2025-11-27 16:00:19,466 | INFO     | --------------------------------------------------
[2025-11-27 17:00:51] 2025-11-27 16:00:19,467 | INFO     | PanDA job id: 6897373288
[2025-11-27 17:00:51] 2025-11-27 16:00:19,467 | INFO     | task id: 47556173
[2025-11-27 17:00:51] 2025-11-27 16:00:19,467 | INFO     | errors: (none)
[2025-11-27 17:00:51] 2025-11-27 16:00:19,467 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:00:51] 2025-11-27 16:00:19,467 | INFO     | pilot state: finished 
[2025-11-27 17:00:51] 2025-11-27 16:00:19,467 | INFO     | transexitcode: 0
[2025-11-27 17:00:51] 2025-11-27 16:00:19,467 | INFO     | exeerrorcode: 0
[2025-11-27 17:00:51] 2025-11-27 16:00:19,468 | INFO     | exeerrordiag: 
[2025-11-27 17:00:51] 2025-11-27 16:00:19,468 | INFO     | exitcode: 0
[2025-11-27 17:00:51] 2025-11-27 16:00:19,468 | INFO     | exitmsg: OK
[2025-11-27 17:00:51] 2025-11-27 16:00:19,468 | INFO     | cpuconsumptiontime: 502132 s
[2025-11-27 17:00:51] 2025-11-27 16:00:19,468 | INFO     | nevents: 1000
[2025-11-27 17:00:51] 2025-11-27 16:00:19,468 | INFO     | neventsw: 0
[2025-11-27 17:00:51] 2025-11-27 16:00:19,468 | INFO     | pid: 2787737
[2025-11-27 17:00:51] 2025-11-27 16:00:19,469 | INFO     | pgrp: 2787737
[2025-11-27 17:00:51] 2025-11-27 16:00:19,469 | INFO     | corecount: 12
[2025-11-27 17:00:51] 2025-11-27 16:00:19,469 | INFO     | event service: False
[2025-11-27 17:00:51] 2025-11-27 16:00:19,469 | INFO     | sizes: {0: 2283435, 1: 2284291, 2: 2284291, 8: 2284581, 12: 2284609, 44550: 2330019, 44551: 2330146, 44555: 2339196, 44556: 2339252, 44562: 2339498}
[2025-11-27 17:00:51] 2025-11-27 16:00:19,469 | INFO     | --------------------------------------------------
[2025-11-27 17:00:51] 2025-11-27 16:00:19,469 | INFO     | 
[2025-11-27 17:00:51] 2025-11-27 16:00:19,470 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-27 17:00:51] 2025-11-27 16:00:19,490 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,491 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,491 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,491 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,492 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,493 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,493 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,493 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,493 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:00:51] 2025-11-27 16:00:19,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,494 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:00:51] 2025-11-27 16:00:19,494 | INFO     | job 6897373288 has completed (purged errors)
[2025-11-27 17:00:51] 2025-11-27 16:00:19,494 | INFO     | overall cleanup function is called
[2025-11-27 17:00:51] 2025-11-27 16:00:20,515 | INFO     | --- collectZombieJob: --- 10, [2787737]
[2025-11-27 17:00:51] 2025-11-27 16:00:20,515 | INFO     | zombie collector waiting for pid 2787737
[2025-11-27 17:00:51] 2025-11-27 16:00:20,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:00:51] 2025-11-27 16:00:20,516 | INFO     | collected zombie processes
[2025-11-27 17:00:51] 2025-11-27 16:00:20,516 | INFO     | will attempt to kill all subprocesses of pid=2787737
[2025-11-27 17:00:51] 2025-11-27 16:00:20,710 | INFO     | process IDs to be killed: [2787737] (in reverse order)
[2025-11-27 17:00:51] 2025-11-27 16:00:20,749 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:00:51] 2025-11-27 16:00:20,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:00:51] 2025-11-27 16:00:20,757 | INFO     | did not find any defunct processes belonging to 2787737
[2025-11-27 17:00:51] 2025-11-27 16:00:20,763 | INFO     | did not find any defunct processes belonging to 2787737
[2025-11-27 17:00:51] 2025-11-27 16:00:20,765 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:00:51] 2025-11-27 16:00:20,765 | INFO     | ready for new job
[2025-11-27 17:00:51] 2025-11-27 16:00:20,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:00:51] 2025-11-27 16:00:20,768 | INFO     | ***************************************
[2025-11-27 17:00:51] 2025-11-27 16:00:20,769 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:00:51] 2025-11-27 16:00:20,769 | INFO     | ***************************************
[2025-11-27 17:00:51] 2025-11-27 16:00:20,769 | INFO     | 
[2025-11-27 17:00:51] 2025-11-27 16:00:20,770 | INFO     | architecture information:
[2025-11-27 17:00:51] 2025-11-27 16:00:20,771 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:00:51] 2025-11-27 16:00:20,781 | INFO     | cat /etc/os-release:
[2025-11-27 17:00:51] NAME="CentOS Linux"
[2025-11-27 17:00:51] VERSION="7 (Core)"
[2025-11-27 17:00:51] ID="centos"
[2025-11-27 17:00:51] ID_LIKE="rhel fedora"
[2025-11-27 17:00:51] VERSION_ID="7"
[2025-11-27 17:00:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:00:51] ANSI_COLOR="0;31"
[2025-11-27 17:00:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:00:51] HOME_URL="https://www.centos.org/"
[2025-11-27 17:00:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:00:51] 
[2025-11-27 17:00:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:00:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:00:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:00:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:00:51] 
[2025-11-27 17:00:51] 2025-11-27 16:00:20,781 | INFO     | ***************************************
[2025-11-27 17:00:51] 2025-11-27 16:00:21,284 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-27 17:00:51] 2025-11-27 16:00:21,303 | INFO     | sufficient remaining disk space (230868123648 B)
[2025-11-27 17:00:51] 2025-11-27 16:00:21,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:00:51] 2025-11-27 16:00:21,304 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:00:51] 2025-11-27 16:00:21,304 | INFO     | update_server=False
[2025-11-27 17:00:51] 2025-11-27 16:00:21,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:00:51] 2025-11-27 16:00:21,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:00:51] 2025-11-27 16:00:21,304 | INFO     | aborting loop
[2025-11-27 17:00:51] 2025-11-27 16:00:21,470 | INFO     | all job control threads have been joined
[2025-11-27 17:00:51] 2025-11-27 16:00:21,483 | INFO     | all payload control threads have been joined
[2025-11-27 17:00:51] 2025-11-27 16:00:21,852 | INFO     | all data control threads have been joined
[2025-11-27 17:00:51] 2025-11-27 16:00:22,310 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:22,310 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:22,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:00:51] 2025-11-27 16:00:22,476 | INFO     | [job] control thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:22,489 | INFO     | [payload] control thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:22,688 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:22,857 | INFO     | [data] control thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:22,921 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:23,018 | INFO     | [job] validate thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:23,258 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:23,258 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:23,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:00:51] 2025-11-27 16:00:23,383 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:23,686 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:24,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:00:51] 2025-11-27 16:00:24,435 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:25,233 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:27,286 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:32,255 | INFO     | job.realtimelogging is not enabled
[2025-11-27 17:00:51] 2025-11-27 16:00:32,453 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:00:51] 2025-11-27 16:00:33,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:00:51] 2025-11-27 16:00:34,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218476668736)>', '<ExcThread(monitor, started 140217663092480)>']
[2025-11-27 17:00:51] 2025-11-27 16:00:39,322 | INFO     | all workflow threads have been joined
[2025-11-27 17:00:51] 2025-11-27 16:00:39,322 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:00:51] 2025-11-27 16:00:39,323 | INFO     | traces error code: 0
[2025-11-27 17:00:51] 2025-11-27 16:00:39,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:00:51] 2025-11-27 16:00:51,680 | INFO     | PID=2780264 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:00:51] 2025-11-27 16:00:51,681 | INFO     | .. there are 2 such processes running
[2025-11-27 17:00:51] 2025-11-27 16:00:51,681 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:00:51] 2025-11-27 16:00:51,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:00:51] 2025-11-27 16:00:51,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:00:51] 2025-11-27 16:00:51,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:00:51] 2025-11-27 16:00:51,682 | INFO     | [monitor] control thread has ended
[2025-11-27 17:00:51] 2025-11-27 16:00:51,806 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:00:51] 2025-11-27 16:00:51,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:00:51] 2025-11-27 16:00:51,810 [wrapper] pilotpid: 2780264
[2025-11-27 17:00:51] 2025-11-27 16:00:51,813 [wrapper] Pilot exit status: 0
[2025-11-27 17:00:51] 2025-11-27 16:00:51,822 [wrapper] pandaids: 6897373288
[2025-11-27 17:00:51] 2025-11-27 16:00:51,858 [wrapper] cleanup supervisor_pilot 3027947 2780265
[2025-11-27 17:00:51] 2025-11-27 16:00:51,861 [wrapper] Test setup, not cleaning
[2025-11-27 17:00:51] 2025-11-27 16:00:51,864 [wrapper] apfmon messages muted
[2025-11-27 17:00:51] 2025-11-27 16:00:51,866 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:00:51] 2025-11-27 16:00:51,868 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:00:51]  *** Error codes and diagnostics ***
[2025-11-27 17:00:51]     "exeErrorCode": 0,
[2025-11-27 17:00:51]     "exeErrorDiag": "",
[2025-11-27 17:00:51]     "pilotErrorCode": 0,
[2025-11-27 17:00:51]     "pilotErrorDiag": "",
[2025-11-27 17:00:51]  *** Listing of results directory ***
[2025-11-27 17:00:51] total 1327840
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:55 queuedata.json
[2025-11-27 17:00:51] -rwx------ 1 boinc boinc     36292 Nov 25 17:57 runpilot2-wrapper.sh
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc       100 Nov 27 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:00:51] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 04:37 run_atlas
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc       105 Nov 27 04:37 job.xml
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc      6295 Nov 27 04:37 init_data.xml
[2025-11-27 17:00:51] -rw-r--r-- 2 boinc boinc 408676781 Nov 27 04:37 EVNT.47483658._003094.pool.root.1
[2025-11-27 17:00:51] -rw-r--r-- 2 boinc boinc    590107 Nov 27 04:37 input.tar.gz
[2025-11-27 17:00:51] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:37 start_atlas.sh
[2025-11-27 17:00:51] drwxrwx--x 2 boinc boinc        68 Nov 27 04:37 shared
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:37 boinc_lockfile
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc      2785 Nov 27 04:37 pandaJob.out
[2025-11-27 17:00:51] -rw------- 1 boinc boinc    991546 Nov 27 04:37 agis_schedconf.cvmfs.json
[2025-11-27 17:00:51] drwx------ 5 boinc boinc      4096 Nov 27 04:37 pilot3
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc       533 Nov 27 16:48 boinc_task_state.xml
[2025-11-27 17:00:51] -rw------- 1 boinc boinc 929811301 Nov 27 16:59 HITS.47556173._000770.pool.root.1
[2025-11-27 17:00:51] -rw------- 1 boinc boinc      1035 Nov 27 17:00 memory_monitor_summary.json
[2025-11-27 17:00:51] -rw------- 1 boinc boinc   1516240 Nov 27 17:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:00:51] -rw------- 1 boinc boinc   2435691 Nov 27 17:00 log.47556173._000770.job.log.tgz.1
[2025-11-27 17:00:51] -rw------- 1 boinc boinc        95 Nov 27 17:00 pilot_heartbeat.json
[2025-11-27 17:00:51] -rw------- 1 boinc boinc      8625 Nov 27 17:00 heartbeat.json
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc        29 Nov 27 17:00 wrapper_checkpoint.txt
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc      8192 Nov 27 17:00 boinc_mmap_file
[2025-11-27 17:00:51] -rw------- 1 boinc boinc       822 Nov 27 17:00 pilotlog.txt
[2025-11-27 17:00:51] -rw------- 1 boinc boinc   6225679 Nov 27 17:00 log.47556173._000770.job.log.1
[2025-11-27 17:00:51] -rw------- 1 boinc boinc       353 Nov 27 17:00 output.list
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc       620 Nov 27 17:00 runtime_log
[2025-11-27 17:00:51] -rw------- 1 boinc boinc   8683520 Nov 27 17:00 result.tar.gz
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc      8842 Nov 27 17:00 runtime_log.err
[2025-11-27 17:00:51] -rw------- 1 boinc boinc       665 Nov 27 17:00 eMaKDm7WBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXaJKDmHfCOun.diag
[2025-11-27 17:00:51] -rw-r--r-- 1 boinc boinc     21446 Nov 27 17:00 stderr.txt
[2025-11-27 17:00:51] HITS file was successfully produced:
[2025-11-27 17:00:51] -rw------- 1 boinc boinc 929811301 Nov 27 16:59 shared/HITS.pool.root.1
[2025-11-27 17:00:51]  *** Contents of shared directory: ***
[2025-11-27 17:00:51] total 1316196
[2025-11-27 17:00:51] -rw-r--r-- 2 boinc boinc 408676781 Nov 27 04:37 ATLAS.root_0
[2025-11-27 17:00:51] -rw-r--r-- 2 boinc boinc    590107 Nov 27 04:37 input.tar.gz
[2025-11-27 17:00:51] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:37 start_atlas.sh
[2025-11-27 17:00:51] -rw------- 1 boinc boinc 929811301 Nov 27 16:59 HITS.pool.root.1
[2025-11-27 17:00:51] -rw------- 1 boinc boinc   8683520 Nov 27 17:00 result.tar.gz
17:00:53 (2776466): run_atlas exited; CPU time 501904.921212
17:00:53 (2776466): called boinc_finish(0)

</stderr_txt>
]]>

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