Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:12:16 (2681388): wrapper (7.7.26015): starting
22:12:16 (2681388): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 22:12:16] Arguments: --nthreads 8
[2025-11-26 22:12:16] Threads: 8
[2025-11-26 22:12:16] Checking for CVMFS
[2025-11-26 22:12:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:12:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:12:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:12:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:12:17] 2.13.3.0 12525 30799 223252 153344 1 88 40262733 40960000 46704 16776704 0 244926141 99.716 189237401 35016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 22:12:17] CVMFS is ok
[2025-11-26 22:12:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:12:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:12:17] Further information can be found at the LHC@home message board.
[2025-11-26 22:12:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:12:17] Checking for apptainer binary...
[2025-11-26 22:12:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:12:17] Running /usr/bin/apptainer --version
[2025-11-26 22:12:17] apptainer version 1.4.4-1.el9
[2025-11-26 22:12:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:12:18] c7-4-30.aglt2.org
[2025-11-26 22:12:18] apptainer works
[2025-11-26 22:12:18] Set ATHENA_PROC_NUMBER=8
[2025-11-26 22:12:18] Set ATHENA_CORE_NUMBER=8
[2025-11-26 22:12:18] Starting ATLAS job with PandaID=6898686584
[2025-11-26 22:12:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:06:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:06:49] 2025-11-27 18:05:12,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:06:49] 2025-11-27 18:05:13,551 | INFO     | time since job start (53544s) is within the limit (172800.0s)
[2025-11-27 13:06:49] 2025-11-27 18:05:14,635 | INFO     | monitor loop #3338: job 0:6898686584 is in state 'finished'
[2025-11-27 13:06:49] 2025-11-27 18:05:14,636 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:06:49] 2025-11-27 18:05:15,570 | INFO     | time since job start (53546s) is within the limit (172800.0s)
[2025-11-27 13:06:49] 2025-11-27 18:05:17,141 | INFO     | monitor loop #3339: job 0:6898686584 is in state 'finished'
[2025-11-27 13:06:49] 2025-11-27 18:05:17,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:06:49] 2025-11-27 18:05:17,580 | INFO     | time since job start (53548s) is within the limit (172800.0s)
[2025-11-27 13:06:49] 2025-11-27 18:05:19,591 | INFO     | time since job start (53550s) is within the limit (172800.0s)
[2025-11-27 13:06:49] 2025-11-27 18:05:19,656 | INFO     | monitor loop #3340: job 0:6898686584 is in state 'finished'
[2025-11-27 13:06:49] 2025-11-27 18:05:19,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:06:49] 2025-11-27 18:05:21,600 | INFO     | time since job start (53552s) is within the limit (172800.0s)
[2025-11-27 13:06:49] 2025-11-27 18:05:22,167 | INFO     | monitor loop #3341: job 0:6898686584 is in state 'finished'
[2025-11-27 13:06:49] 2025-11-27 18:05:22,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,608 | INFO     | time since job start (53554s) is within the limit (172800.0s)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,631 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 13:06:49] 2025-11-27 18:05:23,641 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3160.5188854166663
[2025-11-27 13:06:49] 2025-11-27 18:05:23,672 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898686584/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,673 | INFO     | extracted standard info from prmon json
[2025-11-27 13:06:49] 2025-11-27 18:05:23,673 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:06:49] 2025-11-27 18:05:23,673 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:06:49] 2025-11-27 18:05:23,684 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:06:49] 2025-11-27 18:05:23,685 | INFO     | sum of square deviations: 209158336186.31696
[2025-11-27 13:06:49] 2025-11-27 18:05:23,700 | INFO     | sum of deviations: 9827890883450.848
[2025-11-27 13:06:49] 2025-11-27 18:05:23,700 | INFO     | mean x: 1764239958.3785632
[2025-11-27 13:06:49] 2025-11-27 18:05:23,700 | INFO     | mean y: 4717642.045610034
[2025-11-27 13:06:49] 2025-11-27 18:05:23,700 | INFO     | intersect: -82893043543.63875
[2025-11-27 13:06:49] 2025-11-27 18:05:23,701 | INFO     | chi2: 52.77748722716498
[2025-11-27 13:06:49] 2025-11-27 18:05:23,702 | INFO     | sum of square deviations: 205601384705.59644
[2025-11-27 13:06:49] 2025-11-27 18:05:23,716 | INFO     | sum of deviations: 10374694527392.24
[2025-11-27 13:06:49] 2025-11-27 18:05:23,716 | INFO     | mean x: 1764239805.880734
[2025-11-27 13:06:49] 2025-11-27 18:05:23,716 | INFO     | mean y: 4741082.9541284405
[2025-11-27 13:06:49] 2025-11-27 18:05:23,716 | INFO     | intersect: -89019217025.53511
[2025-11-27 13:06:49] 2025-11-27 18:05:23,717 | INFO     | chi2: 47.49582829099068
[2025-11-27 13:06:49] 2025-11-27 18:05:23,717 | INFO     | current chi2=47.49582829099068 (change=10.007408866286063 %)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,717 | INFO     | right removable region: 871
[2025-11-27 13:06:49] 2025-11-27 18:05:23,718 | INFO     | sum of square deviations: 205601182185.5964
[2025-11-27 13:06:49] 2025-11-27 18:05:23,733 | INFO     | sum of deviations: 9239568632480.748
[2025-11-27 13:06:49] 2025-11-27 18:05:23,733 | INFO     | mean x: 1764240110.880734
[2025-11-27 13:06:49] 2025-11-27 18:05:23,733 | INFO     | mean y: 4742861.978211009
[2025-11-27 13:06:49] 2025-11-27 18:05:23,733 | INFO     | intersect: -79278933502.99144
[2025-11-27 13:06:49] 2025-11-27 18:05:23,734 | INFO     | chi2: 48.78048682115112
[2025-11-27 13:06:49] 2025-11-27 18:05:23,734 | INFO     | current chi2=48.78048682115112 (change=7.57330561951531 %)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,734 | INFO     | left removable region: 10
[2025-11-27 13:06:49] 2025-11-27 18:05:23,735 | INFO     | sum of square deviations: 197918231573.5191
[2025-11-27 13:06:49] 2025-11-27 18:05:23,748 | INFO     | sum of deviations: 9482588507194.21
[2025-11-27 13:06:49] 2025-11-27 18:05:23,749 | INFO     | mean x: 1764240080.3832753
[2025-11-27 13:06:49] 2025-11-27 18:05:23,749 | INFO     | mean y: 4789313.917537747
[2025-11-27 13:06:49] 2025-11-27 18:05:23,749 | INFO     | intersect: -84522859186.01077
[2025-11-27 13:06:49] 2025-11-27 18:05:23,749 | INFO     | chi2: 41.09775482803878
[2025-11-27 13:06:49] 2025-11-27 18:05:23,750 | INFO     | current memory leak: 47.91 B/s (using 861 data points, chi2=41.10)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | could have reported an average CPU frequency of 3117 MHz (33 samples)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | ..............................
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . Timing measurements:
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . get job = 0 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . initial setup = 3 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . payload setup = 19 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . stage-in = 0 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . payload execution = 53469 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . stage-out = 4 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | . log creation = 0 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,751 | INFO     | ..............................
[2025-11-27 13:06:49] 2025-11-27 18:05:23,828 | INFO     | 
[2025-11-27 13:06:49] 2025-11-27 18:05:23,828 | INFO     | job summary report
[2025-11-27 13:06:49] 2025-11-27 18:05:23,828 | INFO     | --------------------------------------------------
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | PanDA job id: 6898686584
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | task id: 47556185
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | errors: (none)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | pilot state: finished 
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | transexitcode: 0
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | exeerrorcode: 0
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | exeerrordiag: 
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | exitcode: 0
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | exitmsg: OK
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | cpuconsumptiontime: 195899 s
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | nevents: 1000
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | neventsw: 0
[2025-11-27 13:06:49] 2025-11-27 18:05:23,829 | INFO     | pid: 2703082
[2025-11-27 13:06:49] 2025-11-27 18:05:23,830 | INFO     | pgrp: 2703082
[2025-11-27 13:06:49] 2025-11-27 18:05:23,830 | INFO     | corecount: 8
[2025-11-27 13:06:49] 2025-11-27 18:05:23,830 | INFO     | event service: False
[2025-11-27 13:06:49] 2025-11-27 18:05:23,830 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284342, 13: 2284632, 23: 2284688, 53493: 2335714, 53499: 2344708, 53503: 2344764, 53519: 2345074}
[2025-11-27 13:06:49] 2025-11-27 18:05:23,830 | INFO     | --------------------------------------------------
[2025-11-27 13:06:49] 2025-11-27 18:05:23,830 | INFO     | 
[2025-11-27 13:06:49] 2025-11-27 18:05:23,830 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,849 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | job 6898686584 has completed (purged errors)
[2025-11-27 13:06:49] 2025-11-27 18:05:23,850 | INFO     | overall cleanup function is called
[2025-11-27 13:06:49] 2025-11-27 18:05:24,866 | INFO     | --- collectZombieJob: --- 10, [2703082]
[2025-11-27 13:06:49] 2025-11-27 18:05:24,866 | INFO     | zombie collector waiting for pid 2703082
[2025-11-27 13:06:49] 2025-11-27 18:05:24,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:06:49] 2025-11-27 18:05:24,866 | INFO     | collected zombie processes
[2025-11-27 13:06:49] 2025-11-27 18:05:24,866 | INFO     | will attempt to kill all subprocesses of pid=2703082
[2025-11-27 13:06:49] 2025-11-27 18:05:26,043 | INFO     | process IDs to be killed: [2703082] (in reverse order)
[2025-11-27 13:06:49] 2025-11-27 18:05:26,279 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:06:49] 2025-11-27 18:05:26,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:06:49] 2025-11-27 18:05:26,306 | INFO     | did not find any defunct processes belonging to 2703082
[2025-11-27 13:06:49] 2025-11-27 18:05:26,332 | INFO     | did not find any defunct processes belonging to 2703082
[2025-11-27 13:06:49] 2025-11-27 18:05:26,333 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:06:49] 2025-11-27 18:05:26,333 | INFO     | ready for new job
[2025-11-27 13:06:49] 2025-11-27 18:05:26,333 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:06:49] 2025-11-27 18:05:26,336 | INFO     | ***************************************
[2025-11-27 13:06:49] 2025-11-27 18:05:26,336 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:06:49] 2025-11-27 18:05:26,336 | INFO     | ***************************************
[2025-11-27 13:06:49] 2025-11-27 18:05:26,336 | INFO     | 
[2025-11-27 13:06:49] 2025-11-27 18:05:26,341 | INFO     | architecture information:
[2025-11-27 13:06:49] 2025-11-27 18:05:26,342 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:06:49] 2025-11-27 18:05:26,418 | INFO     | cat /etc/os-release:
[2025-11-27 13:06:49] NAME="CentOS Linux"
[2025-11-27 13:06:49] VERSION="7 (Core)"
[2025-11-27 13:06:49] ID="centos"
[2025-11-27 13:06:49] ID_LIKE="rhel fedora"
[2025-11-27 13:06:49] VERSION_ID="7"
[2025-11-27 13:06:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:06:49] ANSI_COLOR="0;31"
[2025-11-27 13:06:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:06:49] HOME_URL="https://www.centos.org/"
[2025-11-27 13:06:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:06:49] 
[2025-11-27 13:06:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:06:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:06:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:06:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:06:49] 
[2025-11-27 13:06:49] 2025-11-27 18:05:26,419 | INFO     | ***************************************
[2025-11-27 13:06:49] 2025-11-27 18:05:26,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 13:06:49] 2025-11-27 18:05:26,975 | INFO     | sufficient remaining disk space (120570511360 B)
[2025-11-27 13:06:49] 2025-11-27 18:05:26,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:06:49] 2025-11-27 18:05:26,976 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:06:49] 2025-11-27 18:05:26,976 | INFO     | update_server=False
[2025-11-27 13:06:49] 2025-11-27 18:05:26,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:06:49] 2025-11-27 18:05:27,224 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 13:06:49] 2025-11-27 18:05:27,228 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 13:06:49] 2025-11-27 18:05:27,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:06:49] 2025-11-27 18:05:27,228 | INFO     | will abort loop
[2025-11-27 13:06:49] 2025-11-27 18:05:27,270 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:06:49] 2025-11-27 18:05:27,454 | INFO     | all data control threads have been joined
[2025-11-27 13:06:49] 2025-11-27 18:05:27,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:06:49] 2025-11-27 18:05:27,989 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,097 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,193 | INFO     | all job control threads have been joined
[2025-11-27 13:06:49] 2025-11-27 18:05:28,234 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,460 | INFO     | [data] control thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,521 | INFO     | all payload control threads have been joined
[2025-11-27 13:06:49] 2025-11-27 18:05:28,559 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,632 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,671 | INFO     | [job] validate thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:28,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:06:49] 2025-11-27 18:05:29,153 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:29,205 | INFO     | [job] control thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:29,217 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:29,475 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:29,533 | INFO     | [payload] control thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:29,652 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:29,848 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:31,289 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:06:49] 2025-11-27 18:05:57,822 | INFO     | PID=2687488 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:06:49] 2025-11-27 18:05:57,822 | INFO     | .. there are 66 such processes running
[2025-11-27 13:06:49] 2025-11-27 18:05:57,823 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:06:49] 2025-11-27 18:05:57,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:06:49] 2025-11-27 18:05:57,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:06:49] 2025-11-27 18:06:22,004 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:06:49] 2025-11-27 18:06:22,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183548270400)>', '<ExcThread(monitor, started 140183202674432)>']
[2025-11-27 13:06:49] 2025-11-27 18:06:23,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:06:49] 2025-11-27 18:06:23,027 | INFO     | [monitor] control thread has ended
[2025-11-27 13:06:49] 2025-11-27 18:06:27,681 | INFO     | all workflow threads have been joined
[2025-11-27 13:06:49] 2025-11-27 18:06:27,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:06:49] 2025-11-27 18:06:27,684 | INFO     | traces error code: 0
[2025-11-27 13:06:49] 2025-11-27 18:06:27,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:06:49] 2025-11-27 18:06:28,076 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:06:49] 2025-11-27 18:06:28,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:06:49] 2025-11-27 18:06:28,129 [wrapper] pilotpid: 2687488
[2025-11-27 13:06:49] 2025-11-27 18:06:28,134 [wrapper] Pilot exit status: 0
[2025-11-27 13:06:49] 2025-11-27 18:06:28,152 [wrapper] pandaids: 6898686584
[2025-11-27 13:06:49] 2025-11-27 18:06:28,310 [wrapper] cleanup supervisor_pilot 3527325 2687489
[2025-11-27 13:06:49] 2025-11-27 18:06:28,317 [wrapper] Test setup, not cleaning
[2025-11-27 13:06:49] 2025-11-27 18:06:28,320 [wrapper] apfmon messages muted
[2025-11-27 13:06:49] 2025-11-27 18:06:28,322 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:06:49] 2025-11-27 18:06:28,324 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:06:49]  *** Error codes and diagnostics ***
[2025-11-27 13:06:49]     "exeErrorCode": 0,
[2025-11-27 13:06:49]     "exeErrorDiag": "",
[2025-11-27 13:06:49]     "pilotErrorCode": 0,
[2025-11-27 13:06:49]     "pilotErrorDiag": "",
[2025-11-27 13:06:49]  *** Listing of results directory ***
[2025-11-27 13:06:49] total 1321688
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 13:06:49] -rwx------. 1 boincer umatlas     36292 Nov 26 11:39 runpilot2-wrapper.sh
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas       100 Nov 26 22:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:06:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 22:12 run_atlas
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas       105 Nov 26 22:12 job.xml
[2025-11-27 13:06:49] -rw-r--r--. 2 boincer umatlas 411466306 Nov 26 22:12 EVNT.47483658._004299.pool.root.1
[2025-11-27 13:06:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:12 start_atlas.sh
[2025-11-27 13:06:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 22:12 shared
[2025-11-27 13:06:49] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 22:12 input.tar.gz
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas         0 Nov 26 22:12 boinc_lockfile
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 22:12 pandaJob.out
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas      2074 Nov 26 22:12 stderr.txt
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas        57 Nov 26 22:12 setup.sh.local
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas    991554 Nov 26 22:12 agis_schedconf.cvmfs.json
[2025-11-27 13:06:49] drwx------. 5 boincer umatlas      4096 Nov 26 22:12 pilot3
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:37 boinc_task_state.xml
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 13:00 init_data.xml
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas 920053943 Nov 27 13:03 HITS.47556185._000628.pool.root.1
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas      1075 Nov 27 13:04 memory_monitor_summary.json
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas   1516240 Nov 27 13:05 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas   2071620 Nov 27 13:05 log.47556185._000628.job.log.tgz.1
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas      8642 Nov 27 13:05 heartbeat.json
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas        95 Nov 27 13:05 pilot_heartbeat.json
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas      5011 Nov 27 13:06 pilotlog.txt
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas   6924336 Nov 27 13:06 log.47556185._000628.job.log.1
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas       353 Nov 27 13:06 output.list
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas       620 Nov 27 13:06 runtime_log
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas   9011200 Nov 27 13:06 result.tar.gz
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas       665 Nov 27 13:06 yDsNDm6iXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgEKKDmhl1FYm.diag
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 13:06 runtime_log.err
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas        29 Nov 27 13:06 wrapper_checkpoint.txt
[2025-11-27 13:06:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 13:06 boinc_mmap_file
[2025-11-27 13:06:49] HITS file was successfully produced:
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas 920053943 Nov 27 13:03 shared/HITS.pool.root.1
[2025-11-27 13:06:49]  *** Contents of shared directory: ***
[2025-11-27 13:06:49] total 1309720
[2025-11-27 13:06:49] -rw-r--r--. 2 boincer umatlas 411466306 Nov 26 22:12 ATLAS.root_0
[2025-11-27 13:06:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:12 start_atlas.sh
[2025-11-27 13:06:49] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 22:12 input.tar.gz
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas 920053943 Nov 27 13:03 HITS.pool.root.1
[2025-11-27 13:06:49] -rw-------. 1 boincer umatlas   9011200 Nov 27 13:06 result.tar.gz
13:06:51 (2681388): run_atlas exited; CPU time 197494.719205
13:06:51 (2681388): called boinc_finish(0)

</stderr_txt>
]]>

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