Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:46:46 (3162049): wrapper (7.7.26015): starting
18:46:46 (3162049): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:46:46] Arguments: --nthreads 8
[2025-11-26 18:46:46] Threads: 8
[2025-11-26 18:46:46] Checking for CVMFS
[2025-11-26 18:46:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:46:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:46:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:46:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:46:48] 2.11.3.0 52815 29243 194528 153343 0 133 42906224 45568001 23076 130560 0 175877496 99.808 97440211 24952 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 18:46:48] CVMFS is ok
[2025-11-26 18:46:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:46:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:46:48] Further information can be found at the LHC@home message board.
[2025-11-26 18:46:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:46:48] Checking for apptainer binary...
[2025-11-26 18:46:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:46:48] Running /usr/bin/apptainer --version
[2025-11-26 18:46:48] apptainer version 1.4.1-1.el9
[2025-11-26 18:46:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:46:48] wns0013.triumf.lcg
[2025-11-26 18:46:48] apptainer works
[2025-11-26 18:46:48] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:46:48] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:46:48] Starting ATLAS job with PandaID=6898719622
[2025-11-26 18:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:54:38]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | ..............................
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . Timing measurements:
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . get job = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . initial setup = 4 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . payload setup = 26 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . stage-in = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . payload execution = 159 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . stage-out = 1 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . log creation = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | ..............................
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:54:38] 2025-11-27 02:53:49,922 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898719622/pilotlog.txt
[2025-11-26 18:54:38] 2025-11-27 02:53:50,085 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 18:54:38] - Log from pilotlog.txt -
[2025-11-26 18:54:38] 2025-11-27 02:53:49,918 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898719622/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | INFO     | extracted standard info from prmon json
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 18:54:38] 2025-11-27 02:53:49,920 | WARNING  | wrong length of table data, x=[1764211751.0, 1764211812.0, 1764211873.0], y=[2126.0, 613256.0, 709252.0] (must be same and length>=4)
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | ..............................
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . Timing measurements:
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . get job = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . initial setup = 4 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . payload setup = 26 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . stage-in = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . payload execution = 159 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . stage-out = 1 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . log creation = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | ..............................
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:54:38] 2025-11-27 02:53:49,922 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898719622/pilotlog.txt
[2025-11-26 18:54:38] 2025-11-27 02:53:50,086 | WARNING  | 
[2025-11-26 18:54:38] [begin log extracts]
[2025-11-26 18:54:38] - Log from pilotlog.txt -
[2025-11-26 18:54:38] 2025-11-27 02:53:49,918 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898719622/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | INFO     | extracted standard info from prmon json
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 18:54:38] 2025-11-27 02:53:49,919 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 18:54:38] 2025-11-27 02:53:49,920 | WARNING  | wrong length of table data, x=[1764211751.0, 1764211812.0, 1764211873.0], y=[2126.0, 613256.0, 709252.0] (must be same and length>=4)
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | ..............................
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . Timing measurements:
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . get job = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . initial setup = 4 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . payload setup = 26 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . stage-in = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . payload execution = 159 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . stage-out = 1 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | . log creation = 0 s
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | ..............................
[2025-11-26 18:54:38] 2025-11-27 02:53:49,921 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:54:38] 2025-11-27 02:53:49,922 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898719622/pilotlog.txt
[2025-11-26 18:54:38] [end log extracts]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,086 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 18:54:38] 2025-11-27 02:53:50,086 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 18:54:38] 2025-11-27 02:53:50,557 | INFO     | 
[2025-11-26 18:54:38] 2025-11-27 02:53:50,557 | INFO     | job summary report
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | --------------------------------------------------
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | PanDA job id: 6898719622
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | task id: 47556161
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 18:51:20,746 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | pilot state: failed 
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | transexitcode: 65
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | exeerrorcode: 65
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | exitcode: 65
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | cpuconsumptiontime: 48 s
[2025-11-26 18:54:38] 2025-11-27 02:53:50,558 | INFO     | nevents: 0
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | neventsw: 0
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | pid: 3172676
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | pgrp: 3172676
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | corecount: 8
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | event service: False
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | sizes: {0: 2283481, 1: 2284334, 12: 2284334, 24: 2284362, 28: 2284652, 35: 2284680, 190: 2310225, 193: 2314543, 330: 2314681}
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | --------------------------------------------------
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | 
[2025-11-26 18:54:38] 2025-11-27 02:53:50,559 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 18:54:38] 2025-11-27 02:53:50,586 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | job 6898719622 has completed (purged errors)
[2025-11-26 18:54:38] 2025-11-27 02:53:50,588 | INFO     | overall cleanup function is called
[2025-11-26 18:54:38] 2025-11-27 02:53:51,206 | INFO     | PID=3165767 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:54:38] 2025-11-27 02:53:51,206 | INFO     | .. there are 26 such processes running
[2025-11-26 18:54:38] 2025-11-27 02:53:51,603 | INFO     | --- collectZombieJob: --- 10, [3172676]
[2025-11-26 18:54:38] 2025-11-27 02:53:51,603 | INFO     | zombie collector waiting for pid 3172676
[2025-11-26 18:54:38] 2025-11-27 02:53:51,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:54:38] 2025-11-27 02:53:51,603 | INFO     | collected zombie processes
[2025-11-26 18:54:38] 2025-11-27 02:53:51,603 | INFO     | will attempt to kill all subprocesses of pid=3172676
[2025-11-26 18:54:38] 2025-11-27 02:53:52,906 | INFO     | process IDs to be killed: [3172676] (in reverse order)
[2025-11-26 18:54:38] 2025-11-27 02:53:53,434 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:54:38] 2025-11-27 02:53:53,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:54:38] 2025-11-27 02:53:53,511 | INFO     | did not find any defunct processes belonging to 3172676
[2025-11-26 18:54:38] 2025-11-27 02:53:53,574 | INFO     | did not find any defunct processes belonging to 3172676
[2025-11-26 18:54:38] 2025-11-27 02:53:53,575 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:54:38] 2025-11-27 02:53:53,575 | INFO     | ready for new job
[2025-11-26 18:54:38] 2025-11-27 02:53:53,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:54:38] 2025-11-27 02:53:53,577 | INFO     | ***************************************
[2025-11-26 18:54:38] 2025-11-27 02:53:53,577 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:54:38] 2025-11-27 02:53:53,577 | INFO     | ***************************************
[2025-11-26 18:54:38] 2025-11-27 02:53:53,577 | INFO     | 
[2025-11-26 18:54:38] 2025-11-27 02:53:53,579 | INFO     | architecture information:
[2025-11-26 18:54:38] 2025-11-27 02:53:53,611 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:54:38] 2025-11-27 02:53:53,773 | INFO     | cat /etc/os-release:
[2025-11-26 18:54:38] NAME="CentOS Linux"
[2025-11-26 18:54:38] VERSION="7 (Core)"
[2025-11-26 18:54:38] ID="centos"
[2025-11-26 18:54:38] ID_LIKE="rhel fedora"
[2025-11-26 18:54:38] VERSION_ID="7"
[2025-11-26 18:54:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:54:38] ANSI_COLOR="0;31"
[2025-11-26 18:54:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:54:38] HOME_URL="https://www.centos.org/"
[2025-11-26 18:54:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:54:38] 
[2025-11-26 18:54:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:54:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:54:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:54:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:54:38] 
[2025-11-26 18:54:38] 2025-11-27 02:53:53,773 | INFO     | ***************************************
[2025-11-26 18:54:38] 2025-11-27 02:53:54,277 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 18:54:38] 2025-11-27 02:53:54,330 | INFO     | sufficient remaining disk space (1118326226944 B)
[2025-11-26 18:54:38] 2025-11-27 02:53:54,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:54:38] 2025-11-27 02:53:54,331 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:54:38] 2025-11-27 02:53:54,331 | INFO     | update_server=False
[2025-11-26 18:54:38] 2025-11-27 02:53:54,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:54:38] 2025-11-27 02:53:54,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:54:38] 2025-11-27 02:53:54,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:54:38] 2025-11-27 02:53:54,486 | INFO     | aborting loop
[2025-11-26 18:54:38] 2025-11-27 02:53:54,957 | INFO     | all data control threads have been joined
[2025-11-26 18:54:38] 2025-11-27 02:53:55,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:54:38] 2025-11-27 02:53:55,081 | INFO     | all payload control threads have been joined
[2025-11-26 18:54:38] 2025-11-27 02:53:55,203 | INFO     | all job control threads have been joined
[2025-11-26 18:54:38] 2025-11-27 02:53:55,337 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:55,350 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:55,492 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:55,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:54:38] 2025-11-27 02:53:55,892 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:55,963 | INFO     | [data] control thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,087 | INFO     | [payload] control thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,209 | INFO     | [job] control thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,339 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,454 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,557 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,615 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,653 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,677 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,677 | INFO     | [job] validate thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:56,807 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:53:59,066 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:54:38] 2025-11-27 02:54:23,776 | INFO     | PID=3165767 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:54:38] 2025-11-27 02:54:23,776 | INFO     | .. there are 26 such processes running
[2025-11-26 18:54:38] 2025-11-27 02:54:23,776 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:54:38] 2025-11-27 02:54:23,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:54:38] 2025-11-27 02:54:23,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:54:38] 2025-11-27 02:54:30,420 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:54:38] 2025-11-27 02:54:32,001 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699807553344)>', '<ExcThread(monitor, started 140699412449024)>']
[2025-11-26 18:54:38] 2025-11-27 02:54:32,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:54:38] 2025-11-27 02:54:32,837 | INFO     | [monitor] control thread has ended
[2025-11-26 18:54:38] 2025-11-27 02:54:37,028 | INFO     | all workflow threads have been joined
[2025-11-26 18:54:38] 2025-11-27 02:54:37,028 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:54:38] 2025-11-27 02:54:37,028 | INFO     | traces error code: 0
[2025-11-26 18:54:38] 2025-11-27 02:54:37,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:54:38] 2025-11-27 02:54:37,457 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:54:38] 2025-11-27 02:54:37,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:54:38] 2025-11-27 02:54:37,504 [wrapper] pilotpid: 3165767
[2025-11-26 18:54:38] 2025-11-27 02:54:37,527 [wrapper] Pilot exit status: 0
[2025-11-26 18:54:38] 2025-11-27 02:54:37,650 [wrapper] pandaids: 6898719622
[2025-11-26 18:54:38] 2025-11-27 02:54:37,952 [wrapper] cleanup supervisor_pilot 3165774 3165768
[2025-11-26 18:54:38] 2025-11-27 02:54:37,971 [wrapper] Test setup, not cleaning
[2025-11-26 18:54:38] 2025-11-27 02:54:38,005 [wrapper] apfmon messages muted
[2025-11-26 18:54:38] 2025-11-27 02:54:38,039 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:54:38] 2025-11-27 02:54:38,069 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:54:38]  *** Error codes and diagnostics ***
[2025-11-26 18:54:38]     "exeErrorCode": 65,
[2025-11-26 18:54:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 18:54:38]     "pilotErrorCode": 1305,
[2025-11-26 18:54:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 18:54:38]  *** Listing of results directory ***
[2025-11-26 18:54:38] total 404476
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc    576529 Nov 26 08:12 pilot3.tar.gz
[2025-11-26 18:54:38] -rwx------. 1 boinc boinc     36292 Nov 26 08:40 runpilot2-wrapper.sh
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc      5112 Nov 26 08:43 queuedata.json
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc       100 Nov 26 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:54:38] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 18:46 run_atlas
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc       105 Nov 26 18:46 job.xml
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc      6446 Nov 26 18:46 init_data.xml
[2025-11-26 18:54:38] -rw-r--r--. 2 boinc boinc 409941846 Nov 26 18:46 EVNT.47483658._002690.pool.root.1
[2025-11-26 18:54:38] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:46 start_atlas.sh
[2025-11-26 18:54:38] drwxrwx--x. 2 boinc boinc      4096 Nov 26 18:46 shared
[2025-11-26 18:54:38] -rw-r--r--. 2 boinc boinc    590108 Nov 26 18:46 input.tar.gz
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc         0 Nov 26 18:46 boinc_lockfile
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc      2783 Nov 26 18:46 pandaJob.out
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc    991554 Nov 26 18:47 agis_schedconf.cvmfs.json
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc   1516240 Nov 26 18:47 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:54:38] drwx------. 5 boinc boinc      4096 Nov 26 18:47 pilot3
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc       524 Nov 26 18:50 boinc_task_state.xml
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc       995 Nov 26 18:51 memory_monitor_summary.json
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc     49332 Nov 26 18:51 log.47556161._006721.job.log.tgz.1
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc        95 Nov 26 18:53 pilot_heartbeat.json
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc     10328 Nov 26 18:53 heartbeat.json
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc      4823 Nov 26 18:54 pilotlog.txt
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc        23 Nov 26 18:54 wrapper_checkpoint.txt
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc      8192 Nov 26 18:54 boinc_mmap_file
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc    111390 Nov 26 18:54 log.47556161._006721.job.log.1
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc       186 Nov 26 18:54 output.list
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc       620 Nov 26 18:54 runtime_log
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc    184320 Nov 26 18:54 result.tar.gz
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc       645 Nov 26 18:54 tYiMDmrjXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLKNKDmzsQeym.diag
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc      8634 Nov 26 18:54 runtime_log.err
[2025-11-26 18:54:38] -rw-r--r--. 1 boinc boinc     22590 Nov 26 18:54 stderr.txt
[2025-11-26 18:54:38] No HITS result produced
[2025-11-26 18:54:38]  *** Contents of shared directory: ***
[2025-11-26 18:54:38] total 401116
[2025-11-26 18:54:38] -rw-r--r--. 2 boinc boinc 409941846 Nov 26 18:46 ATLAS.root_0
[2025-11-26 18:54:38] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:46 start_atlas.sh
[2025-11-26 18:54:38] -rw-r--r--. 2 boinc boinc    590108 Nov 26 18:46 input.tar.gz
[2025-11-26 18:54:38] -rw-------. 1 boinc boinc    184320 Nov 26 18:54 result.tar.gz
18:54:40 (3162049): run_atlas exited; CPU time 55.865106
18:54:40 (3162049): called boinc_finish(0)

</stderr_txt>
]]>

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