Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:22:11 (29967): wrapper (7.7.26015): starting
21:22:11 (29967): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 21:22:11] Arguments: --nthreads 12
[2025-11-26 21:22:11] Threads: 12
[2025-11-26 21:22:11] Checking for CVMFS
[2025-11-26 21:22:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:22:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:22:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:22:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:22:11] 2.11.2.0 3009 73782 97596 153343 1 1 18142129 20275200 1 130560 0 30406399 99.915 3840325 34784 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 21:22:11] CVMFS is ok
[2025-11-26 21:22:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:22:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:22:11] Further information can be found at the LHC@home message board.
[2025-11-26 21:22:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:22:11] Checking for apptainer binary...
[2025-11-26 21:22:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:22:11] Running /usr/bin/apptainer --version
[2025-11-26 21:22:11] apptainer version 1.3.2-1.el7
[2025-11-26 21:22:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:22:13] c-115-42.aglt2.org
[2025-11-26 21:22:13] apptainer works
[2025-11-26 21:22:13] Set ATHENA_PROC_NUMBER=12
[2025-11-26 21:22:13] Set ATHENA_CORE_NUMBER=12
[2025-11-26 21:22:13] Starting ATLAS job with PandaID=6898688495
[2025-11-26 21:22:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:54:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:54:15] 2025-11-27 08:53:39,883 | INFO     | time since job start (23471s) is within the limit (172800.0s)
[2025-11-27 03:54:15] 2025-11-27 08:53:41,295 | INFO     | monitor loop #1753: job 0:6898688495 is in state 'finished'
[2025-11-27 03:54:15] 2025-11-27 08:53:41,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:54:15] 2025-11-27 08:53:41,889 | INFO     | time since job start (23473s) is within the limit (172800.0s)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,246 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 03:54:15] 2025-11-27 08:53:42,251 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-27 03:54:15] 2025-11-27 08:53:42,254 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898688495/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,255 | INFO     | extracted standard info from prmon json
[2025-11-27 03:54:15] 2025-11-27 08:53:42,255 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:54:15] 2025-11-27 08:53:42,255 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:54:15] 2025-11-27 08:53:42,261 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:54:15] 2025-11-27 08:53:42,261 | INFO     | sum of square deviations: 17695193736.976692
[2025-11-27 03:54:15] 2025-11-27 08:53:42,264 | INFO     | sum of deviations: 231712873698.70404
[2025-11-27 03:54:15] 2025-11-27 08:53:42,265 | INFO     | mean x: 1764221889.264935
[2025-11-27 03:54:15] 2025-11-27 08:53:42,265 | INFO     | mean y: 3803473.355844156
[2025-11-27 03:54:15] 2025-11-27 08:53:42,265 | INFO     | intersect: -23098115040.794266
[2025-11-27 03:54:15] 2025-11-27 08:53:42,265 | INFO     | chi2: 6.438320939458512
[2025-11-27 03:54:15] 2025-11-27 08:53:42,266 | INFO     | sum of square deviations: 17014709761.620996
[2025-11-27 03:54:15] 2025-11-27 08:53:42,269 | INFO     | sum of deviations: 409273651618.09454
[2025-11-27 03:54:15] 2025-11-27 08:53:42,269 | INFO     | mean x: 1764221736.768421
[2025-11-27 03:54:15] 2025-11-27 08:53:42,269 | INFO     | mean y: 3843231.057894737
[2025-11-27 03:54:15] 2025-11-27 08:53:42,269 | INFO     | intersect: -42432935449.69925
[2025-11-27 03:54:15] 2025-11-27 08:53:42,269 | INFO     | chi2: 2.9807280415018376
[2025-11-27 03:54:15] 2025-11-27 08:53:42,270 | INFO     | current chi2=2.9807280415018376 (change=53.703332444428774 %)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,270 | INFO     | sum of square deviations: 16351900536.255959
[2025-11-27 03:54:15] 2025-11-27 08:53:42,273 | INFO     | sum of deviations: 461585351711.0646
[2025-11-27 03:54:15] 2025-11-27 08:53:42,273 | INFO     | mean x: 1764221584.272
[2025-11-27 03:54:15] 2025-11-27 08:53:42,273 | INFO     | mean y: 3855197.2346666665
[2025-11-27 03:54:15] 2025-11-27 08:53:42,273 | INFO     | intersect: -49797012822.16556
[2025-11-27 03:54:15] 2025-11-27 08:53:42,274 | INFO     | chi2: 2.42510570143775
[2025-11-27 03:54:15] 2025-11-27 08:53:42,274 | INFO     | current chi2=2.42510570143775 (change=18.64049092463121 %)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,274 | INFO     | right removable region: 374
[2025-11-27 03:54:15] 2025-11-27 08:53:42,274 | INFO     | sum of square deviations: 17014647541.620989
[2025-11-27 03:54:15] 2025-11-27 08:53:42,277 | INFO     | sum of deviations: 97984084226.50485
[2025-11-27 03:54:15] 2025-11-27 08:53:42,277 | INFO     | mean x: 1764222041.768421
[2025-11-27 03:54:15] 2025-11-27 08:53:42,277 | INFO     | mean y: 3833321.642105263
[2025-11-27 03:54:15] 2025-11-27 08:53:42,278 | INFO     | intersect: -10155982255.614594
[2025-11-27 03:54:15] 2025-11-27 08:53:42,278 | INFO     | chi2: 4.16179580540493
[2025-11-27 03:54:15] 2025-11-27 08:53:42,278 | INFO     | current chi2=4.16179580540493 (change=35.358988088050275 %)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,278 | INFO     | sum of square deviations: 16351799153.79733
[2025-11-27 03:54:15] 2025-11-27 08:53:42,281 | INFO     | sum of deviations: 68013262186.080154
[2025-11-27 03:54:15] 2025-11-27 08:53:42,281 | INFO     | mean x: 1764222194.2693334
[2025-11-27 03:54:15] 2025-11-27 08:53:42,282 | INFO     | mean y: 3840206.92
[2025-11-27 03:54:15] 2025-11-27 08:53:42,282 | INFO     | intersect: -7334221221.352665
[2025-11-27 03:54:15] 2025-11-27 08:53:42,282 | INFO     | chi2: 4.106637112296643
[2025-11-27 03:54:15] 2025-11-27 08:53:42,282 | INFO     | current chi2=4.106637112296643 (change=1.3253579869692822 %)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,282 | INFO     | left removable region: 20
[2025-11-27 03:54:15] 2025-11-27 08:53:42,283 | INFO     | sum of square deviations: 13755725373.920921
[2025-11-27 03:54:15] 2025-11-27 08:53:42,285 | INFO     | sum of deviations: 260002407059.47992
[2025-11-27 03:54:15] 2025-11-27 08:53:42,285 | INFO     | mean x: 1764222163.7740114
[2025-11-27 03:54:15] 2025-11-27 08:53:42,285 | INFO     | mean y: 3902549.9435028248
[2025-11-27 03:54:15] 2025-11-27 08:53:42,286 | INFO     | intersect: -33342358494.099056
[2025-11-27 03:54:15] 2025-11-27 08:53:42,286 | INFO     | chi2: 0.020355107613751026
[2025-11-27 03:54:15] 2025-11-27 08:53:42,286 | INFO     | current memory leak: 18.90 B/s (using 354 data points, chi2=0.02)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,286 | INFO     | could have reported an average CPU frequency of 2576 MHz (16 samples)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | ..............................
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . Timing measurements:
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . get job = 0 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . initial setup = 2 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . payload setup = 7 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . stage-in = 0 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . payload execution = 23435 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . stage-out = 3 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | . log creation = 0 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,287 | INFO     | ..............................
[2025-11-27 03:54:15] 2025-11-27 08:53:42,365 | INFO     | 
[2025-11-27 03:54:15] 2025-11-27 08:53:42,366 | INFO     | job summary report
[2025-11-27 03:54:15] 2025-11-27 08:53:42,366 | INFO     | --------------------------------------------------
[2025-11-27 03:54:15] 2025-11-27 08:53:42,366 | INFO     | PanDA job id: 6898688495
[2025-11-27 03:54:15] 2025-11-27 08:53:42,366 | INFO     | task id: 47556161
[2025-11-27 03:54:15] 2025-11-27 08:53:42,366 | INFO     | errors: (none)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:54:15] 2025-11-27 08:53:42,367 | INFO     | pilot state: finished 
[2025-11-27 03:54:15] 2025-11-27 08:53:42,367 | INFO     | transexitcode: 0
[2025-11-27 03:54:15] 2025-11-27 08:53:42,367 | INFO     | exeerrorcode: 0
[2025-11-27 03:54:15] 2025-11-27 08:53:42,367 | INFO     | exeerrordiag: 
[2025-11-27 03:54:15] 2025-11-27 08:53:42,367 | INFO     | exitcode: 0
[2025-11-27 03:54:15] 2025-11-27 08:53:42,367 | INFO     | exitmsg: OK
[2025-11-27 03:54:15] 2025-11-27 08:53:42,368 | INFO     | cpuconsumptiontime: 270808 s
[2025-11-27 03:54:15] 2025-11-27 08:53:42,368 | INFO     | nevents: 1000
[2025-11-27 03:54:15] 2025-11-27 08:53:42,368 | INFO     | neventsw: 0
[2025-11-27 03:54:15] 2025-11-27 08:53:42,368 | INFO     | pid: 7733
[2025-11-27 03:54:15] 2025-11-27 08:53:42,368 | INFO     | pgrp: 7733
[2025-11-27 03:54:15] 2025-11-27 08:53:42,368 | INFO     | corecount: 12
[2025-11-27 03:54:15] 2025-11-27 08:53:42,368 | INFO     | event service: False
[2025-11-27 03:54:15] 2025-11-27 08:53:42,369 | INFO     | sizes: {0: 2284316, 5: 2284578, 11: 2284634, 23447: 2320566, 23451: 2329560, 23453: 2329644, 23459: 2330018}
[2025-11-27 03:54:15] 2025-11-27 08:53:42,369 | INFO     | --------------------------------------------------
[2025-11-27 03:54:15] 2025-11-27 08:53:42,369 | INFO     | 
[2025-11-27 03:54:15] 2025-11-27 08:53:42,369 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:54:15] 2025-11-27 08:53:42,395 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,395 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,395 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,395 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:54:15] 2025-11-27 08:53:42,398 | INFO     | job 6898688495 has completed (purged errors)
[2025-11-27 03:54:15] 2025-11-27 08:53:42,398 | INFO     | overall cleanup function is called
[2025-11-27 03:54:15] 2025-11-27 08:53:43,415 | INFO     | --- collectZombieJob: --- 10, [7733]
[2025-11-27 03:54:15] 2025-11-27 08:53:43,415 | INFO     | zombie collector waiting for pid 7733
[2025-11-27 03:54:15] 2025-11-27 08:53:43,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:54:15] 2025-11-27 08:53:43,416 | INFO     | collected zombie processes
[2025-11-27 03:54:15] 2025-11-27 08:53:43,416 | INFO     | will attempt to kill all subprocesses of pid=7733
[2025-11-27 03:54:15] 2025-11-27 08:53:43,504 | INFO     | process IDs to be killed: [7733] (in reverse order)
[2025-11-27 03:54:15] 2025-11-27 08:53:43,560 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:54:15] 2025-11-27 08:53:43,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:54:15] 2025-11-27 08:53:43,564 | INFO     | did not find any defunct processes belonging to 7733
[2025-11-27 03:54:15] 2025-11-27 08:53:43,567 | INFO     | did not find any defunct processes belonging to 7733
[2025-11-27 03:54:15] 2025-11-27 08:53:43,568 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:54:15] 2025-11-27 08:53:43,569 | INFO     | ready for new job
[2025-11-27 03:54:15] 2025-11-27 08:53:43,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:54:15] 2025-11-27 08:53:43,571 | INFO     | ***************************************
[2025-11-27 03:54:15] 2025-11-27 08:53:43,571 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:54:15] 2025-11-27 08:53:43,571 | INFO     | ***************************************
[2025-11-27 03:54:15] 2025-11-27 08:53:43,571 | INFO     | 
[2025-11-27 03:54:15] 2025-11-27 08:53:43,571 | INFO     | architecture information:
[2025-11-27 03:54:15] 2025-11-27 08:53:43,572 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:54:15] 2025-11-27 08:53:43,588 | INFO     | cat /etc/os-release:
[2025-11-27 03:54:15] NAME="CentOS Linux"
[2025-11-27 03:54:15] VERSION="7 (Core)"
[2025-11-27 03:54:15] ID="centos"
[2025-11-27 03:54:15] ID_LIKE="rhel fedora"
[2025-11-27 03:54:15] VERSION_ID="7"
[2025-11-27 03:54:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:54:15] ANSI_COLOR="0;31"
[2025-11-27 03:54:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:54:15] HOME_URL="https://www.centos.org/"
[2025-11-27 03:54:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:54:15] 
[2025-11-27 03:54:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:54:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:54:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:54:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:54:15] 
[2025-11-27 03:54:15] 2025-11-27 08:53:43,589 | INFO     | ***************************************
[2025-11-27 03:54:15] 2025-11-27 08:53:44,092 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:54:15] 2025-11-27 08:53:44,109 | INFO     | sufficient remaining disk space (17450401792 B)
[2025-11-27 03:54:15] 2025-11-27 08:53:44,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:54:15] 2025-11-27 08:53:44,110 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:54:15] 2025-11-27 08:53:44,110 | INFO     | update_server=False
[2025-11-27 03:54:15] 2025-11-27 08:53:44,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:54:15] 2025-11-27 08:53:44,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:54:15] 2025-11-27 08:53:44,337 | INFO     | all data control threads have been joined
[2025-11-27 03:54:15] 2025-11-27 08:53:44,618 | INFO     | all payload control threads have been joined
[2025-11-27 03:54:15] 2025-11-27 08:53:44,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:54:15] 2025-11-27 08:53:44,805 | INFO     | aborting loop
[2025-11-27 03:54:15] 2025-11-27 08:53:44,867 | INFO     | all job control threads have been joined
[2025-11-27 03:54:15] 2025-11-27 08:53:45,116 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:45,116 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:45,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:54:15] 2025-11-27 08:53:45,342 | INFO     | [data] control thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:45,624 | INFO     | [payload] control thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:45,806 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:45,853 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:45,872 | INFO     | [job] control thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:45,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:46,254 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:46,376 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:46,518 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:46,528 | INFO     | [job] validate thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:46,533 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:46,583 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:47,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:54:15] 2025-11-27 08:53:47,305 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:53:51,016 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:54:15] 2025-11-27 08:54:06,124 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:54:15] 2025-11-27 08:54:07,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695612942144)>', '<ExcThread(monitor, started 139694717253376)>']
[2025-11-27 03:54:15] 2025-11-27 08:54:12,711 | INFO     | all workflow threads have been joined
[2025-11-27 03:54:15] 2025-11-27 08:54:12,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:54:15] 2025-11-27 08:54:12,712 | INFO     | traces error code: 0
[2025-11-27 03:54:15] 2025-11-27 08:54:12,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:54:15] 2025-11-27 08:54:15,090 | INFO     | PID=1208 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 03:54:15] 2025-11-27 08:54:15,091 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:54:15] 2025-11-27 08:54:15,091 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:54:15] 2025-11-27 08:54:15,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:54:15] 2025-11-27 08:54:15,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:54:15] 2025-11-27 08:54:15,091 | INFO     | [monitor] control thread has ended
[2025-11-27 03:54:15] 2025-11-27 08:54:15,171 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:54:15] 2025-11-27 08:54:15,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:54:15] 2025-11-27 08:54:15,178 [wrapper] pilotpid: 1208
[2025-11-27 03:54:15] 2025-11-27 08:54:15,182 [wrapper] Pilot exit status: 0
[2025-11-27 03:54:15] 2025-11-27 08:54:15,197 [wrapper] pandaids: 6898688495
[2025-11-27 03:54:15] 2025-11-27 08:54:15,233 [wrapper] cleanup supervisor_pilot 28115 1209
[2025-11-27 03:54:15] 2025-11-27 08:54:15,236 [wrapper] Test setup, not cleaning
[2025-11-27 03:54:15] 2025-11-27 08:54:15,240 [wrapper] apfmon messages muted
[2025-11-27 03:54:15] 2025-11-27 08:54:15,243 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:54:15] 2025-11-27 08:54:15,247 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:54:15]  *** Error codes and diagnostics ***
[2025-11-27 03:54:15]     "exeErrorCode": 0,
[2025-11-27 03:54:15]     "exeErrorDiag": "",
[2025-11-27 03:54:15]     "pilotErrorCode": 0,
[2025-11-27 03:54:15]     "pilotErrorDiag": "",
[2025-11-27 03:54:15]  *** Listing of results directory ***
[2025-11-27 03:54:15] total 1330300
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 03:54:15] -rwx------ 1 boincer umatlas     36292 Nov 26 11:39 runpilot2-wrapper.sh
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas       100 Nov 26 21:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:54:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 21:22 run_atlas
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas       105 Nov 26 21:22 job.xml
[2025-11-27 03:54:15] -rw-r--r-- 2 boincer umatlas 411965715 Nov 26 21:22 EVNT.47483658._002681.pool.root.1
[2025-11-27 03:54:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:22 start_atlas.sh
[2025-11-27 03:54:15] drwxrwx--x 2 boincer umatlas      4096 Nov 26 21:22 shared
[2025-11-27 03:54:15] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 21:22 input.tar.gz
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas         0 Nov 26 21:22 boinc_lockfile
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas      2787 Nov 26 21:22 pandaJob.out
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas        57 Nov 26 21:22 setup.sh.local
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas    991554 Nov 26 21:22 agis_schedconf.cvmfs.json
[2025-11-27 03:54:15] drwx------ 5 boincer umatlas      4096 Nov 26 21:22 pilot3
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas       533 Nov 27 03:44 boinc_task_state.xml
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas      5955 Nov 27 03:48 init_data.xml
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas 935491373 Nov 27 03:52 HITS.47556161._006638.pool.root.1
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas        95 Nov 27 03:53 pilot_heartbeat.json
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas      1060 Nov 27 03:53 memory_monitor_summary.json
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas   1516240 Nov 27 03:53 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas   2147133 Nov 27 03:53 log.47556161._006638.job.log.tgz.1
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas      8668 Nov 27 03:53 heartbeat.json
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 03:54 boinc_mmap_file
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas        29 Nov 27 03:54 wrapper_checkpoint.txt
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas       744 Nov 27 03:54 pilotlog.txt
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas   3280037 Nov 27 03:54 log.47556161._006638.job.log.1
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas       353 Nov 27 03:54 output.list
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas       620 Nov 27 03:54 runtime_log
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas   5447680 Nov 27 03:54 result.tar.gz
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas       669 Nov 27 03:54 5QtKDmwiXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJCKKDmvEl5Mo.diag
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 03:54 runtime_log.err
[2025-11-27 03:54:15] -rw-r--r-- 1 boincer umatlas     21297 Nov 27 03:54 stderr.txt
[2025-11-27 03:54:15] HITS file was successfully produced:
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas 935491373 Nov 27 03:52 shared/HITS.pool.root.1
[2025-11-27 03:54:15]  *** Contents of shared directory: ***
[2025-11-27 03:54:15] total 1321800
[2025-11-27 03:54:15] -rw-r--r-- 2 boincer umatlas 411965715 Nov 26 21:22 ATLAS.root_0
[2025-11-27 03:54:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 21:22 start_atlas.sh
[2025-11-27 03:54:15] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 21:22 input.tar.gz
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas 935491373 Nov 27 03:52 HITS.pool.root.1
[2025-11-27 03:54:15] -rw------- 1 boincer umatlas   5447680 Nov 27 03:54 result.tar.gz
03:54:16 (29967): run_atlas exited; CPU time 267299.254327
03:54:16 (29967): called boinc_finish(0)

</stderr_txt>
]]>

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