Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
00:54:04 (127279): wrapper (7.7.26015): starting
00:54:04 (127279): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:54:04] Arguments: --nthreads 8
[2025-11-27 00:54:04] Threads: 8
[2025-11-27 00:54:04] Checking for CVMFS
[2025-11-27 00:54:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:54:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:54:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:54:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:54:05] 2.11.3.0 1658007 5351 83836 153353 0 81 3300770 4096001 1989 130560 0 8716020 99.915 662559 710 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 00:54:05] CVMFS is ok
[2025-11-27 00:54:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:54:05] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 00:54:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 00:54:05] Further information can be found at the LHC@home message board.
[2025-11-27 00:54:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:54:05] Checking for apptainer binary...
[2025-11-27 00:54:05] apptainer is not installed, using version from CVMFS
[2025-11-27 00:54:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:54:05] officedc-System-Product-Name
[2025-11-27 00:54:05] apptainer works
[2025-11-27 00:54:05] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:54:05] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:54:05] Starting ATLAS job with PandaID=6898413636
[2025-11-27 00:54:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:36:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:36:54] 2025-11-27 13:36:05,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,532 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 06:36:54] 2025-11-27 13:36:05,535 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3662.2160624999997
[2025-11-27 06:36:54] 2025-11-27 13:36:05,539 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6898413636/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,539 | INFO     | extracted standard info from prmon json
[2025-11-27 06:36:54] 2025-11-27 13:36:05,539 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:36:54] 2025-11-27 13:36:05,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:36:54] 2025-11-27 13:36:05,543 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:36:54] 2025-11-27 13:36:05,543 | INFO     | sum of square deviations: 11762176470.809452
[2025-11-27 06:36:54] 2025-11-27 13:36:05,545 | INFO     | sum of deviations: 228038563816.92853
[2025-11-27 06:36:54] 2025-11-27 13:36:05,545 | INFO     | mean x: 1764240292.7738094
[2025-11-27 06:36:54] 2025-11-27 13:36:05,545 | INFO     | mean y: 2840028.9464285714
[2025-11-27 06:36:54] 2025-11-27 13:36:05,545 | INFO     | intersect: -34201273775.206554
[2025-11-27 06:36:54] 2025-11-27 13:36:05,545 | INFO     | chi2: 5.0743671826513514
[2025-11-27 06:36:54] 2025-11-27 13:36:05,546 | INFO     | sum of square deviations: 11244873900.42891
[2025-11-27 06:36:54] 2025-11-27 13:36:05,547 | INFO     | sum of deviations: 310953424045.5769
[2025-11-27 06:36:54] 2025-11-27 13:36:05,547 | INFO     | mean x: 1764240140.2779455
[2025-11-27 06:36:54] 2025-11-27 13:36:05,547 | INFO     | mean y: 2864398.6132930513
[2025-11-27 06:36:54] 2025-11-27 13:36:05,548 | INFO     | intersect: -48783499709.67174
[2025-11-27 06:36:54] 2025-11-27 13:36:05,548 | INFO     | chi2: 2.950207843355277
[2025-11-27 06:36:54] 2025-11-27 13:36:05,548 | INFO     | current chi2=2.950207843355277 (change=41.86057616323704 %)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,548 | INFO     | sum of square deviations: 10742946898.098192
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | sum of deviations: 306267851231.282
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | mean x: 1764239987.7791412
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | mean y: 2862961.3650306747
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | intersect: -50293391431.27975
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | chi2: 2.9284483605254708
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | current chi2=2.9284483605254708 (change=0.7375576225524205 %)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | right removable region: 325
[2025-11-27 06:36:54] 2025-11-27 13:36:05,550 | INFO     | sum of square deviations: 11244817780.42891
[2025-11-27 06:36:54] 2025-11-27 13:36:05,552 | INFO     | sum of deviations: 120262331138.29907
[2025-11-27 06:36:54] 2025-11-27 13:36:05,552 | INFO     | mean x: 1764240445.2779455
[2025-11-27 06:36:54] 2025-11-27 13:36:05,552 | INFO     | mean y: 2871752.6163141993
[2025-11-27 06:36:54] 2025-11-27 13:36:05,552 | INFO     | intersect: -18865523696.785416
[2025-11-27 06:36:54] 2025-11-27 13:36:05,552 | INFO     | chi2: 2.30750865171112
[2025-11-27 06:36:54] 2025-11-27 13:36:05,552 | INFO     | current chi2=2.30750865171112 (change=54.52617895685174 %)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,553 | INFO     | sum of square deviations: 10742874918.098194
[2025-11-27 06:36:54] 2025-11-27 13:36:05,554 | INFO     | sum of deviations: 98090526805.7055
[2025-11-27 06:36:54] 2025-11-27 13:36:05,554 | INFO     | mean x: 1764240597.7791412
[2025-11-27 06:36:54] 2025-11-27 13:36:05,554 | INFO     | mean y: 2878478.162576687
[2025-11-27 06:36:54] 2025-11-27 13:36:05,554 | INFO     | intersect: -16105964915.01775
[2025-11-27 06:36:54] 2025-11-27 13:36:05,555 | INFO     | chi2: 2.241849337639608
[2025-11-27 06:36:54] 2025-11-27 13:36:05,555 | INFO     | current chi2=2.241849337639608 (change=2.845463397193451 %)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,555 | INFO     | left removable region: 20
[2025-11-27 06:36:54] 2025-11-27 13:36:05,555 | INFO     | sum of square deviations: 8797683215.750902
[2025-11-27 06:36:54] 2025-11-27 13:36:05,556 | INFO     | sum of deviations: 148874224176.01334
[2025-11-27 06:36:54] 2025-11-27 13:36:05,556 | INFO     | mean x: 1764240567.2819672
[2025-11-27 06:36:54] 2025-11-27 13:36:05,556 | INFO     | mean y: 2912418.51147541
[2025-11-27 06:36:54] 2025-11-27 13:36:05,556 | INFO     | intersect: -29851532129.31199
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | chi2: 0.03937434032340063
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | current memory leak: 16.92 B/s (using 305 data points, chi2=0.04)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | could have reported an average CPU frequency of 3947 MHz (15 samples)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | ..............................
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . Timing measurements:
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . get job = 0 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . initial setup = 3 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . payload setup = 3 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . stage-in = 0 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . payload execution = 20475 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . stage-out = 4 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | . log creation = 0 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,557 | INFO     | ..............................
[2025-11-27 06:36:54] 2025-11-27 13:36:05,611 | INFO     | 
[2025-11-27 06:36:54] 2025-11-27 13:36:05,611 | INFO     | job summary report
[2025-11-27 06:36:54] 2025-11-27 13:36:05,611 | INFO     | --------------------------------------------------
[2025-11-27 06:36:54] 2025-11-27 13:36:05,611 | INFO     | PanDA job id: 6898413636
[2025-11-27 06:36:54] 2025-11-27 13:36:05,611 | INFO     | task id: 47556161
[2025-11-27 06:36:54] 2025-11-27 13:36:05,611 | INFO     | errors: (none)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | pilot state: finished 
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | transexitcode: 0
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | exeerrorcode: 0
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | exeerrordiag: 
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | exitcode: 0
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | exitmsg: OK
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | cpuconsumptiontime: 153657 s
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | nevents: 1000
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | neventsw: 0
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | pid: 139953
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | pgrp: 139953
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | corecount: 8
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | event service: False
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | sizes: {0: 2284152, 1: 2284351, 3: 2284613, 11: 2284641, 20482: 2319144, 20487: 2328152, 20490: 2328336, 20497: 2328582}
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | --------------------------------------------------
[2025-11-27 06:36:54] 2025-11-27 13:36:05,612 | INFO     | 
[2025-11-27 06:36:54] 2025-11-27 13:36:05,613 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-27 06:36:54] 2025-11-27 13:36:05,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:36:54] 2025-11-27 13:36:05,631 | INFO     | job 6898413636 has completed (purged errors)
[2025-11-27 06:36:54] 2025-11-27 13:36:05,631 | INFO     | overall cleanup function is called
[2025-11-27 06:36:54] 2025-11-27 13:36:06,645 | INFO     | --- collectZombieJob: --- 10, [139953]
[2025-11-27 06:36:54] 2025-11-27 13:36:06,645 | INFO     | zombie collector waiting for pid 139953
[2025-11-27 06:36:54] 2025-11-27 13:36:06,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:36:54] 2025-11-27 13:36:06,646 | INFO     | collected zombie processes
[2025-11-27 06:36:54] 2025-11-27 13:36:06,646 | INFO     | will attempt to kill all subprocesses of pid=139953
[2025-11-27 06:36:54] 2025-11-27 13:36:06,773 | INFO     | process IDs to be killed: [139953] (in reverse order)
[2025-11-27 06:36:54] 2025-11-27 13:36:06,827 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:36:54] 2025-11-27 13:36:06,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:36:54] 2025-11-27 13:36:06,831 | INFO     | did not find any defunct processes belonging to 139953
[2025-11-27 06:36:54] 2025-11-27 13:36:06,834 | INFO     | did not find any defunct processes belonging to 139953
[2025-11-27 06:36:54] 2025-11-27 13:36:06,835 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:36:54] 2025-11-27 13:36:06,835 | INFO     | ready for new job
[2025-11-27 06:36:54] 2025-11-27 13:36:06,835 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:36:54] 2025-11-27 13:36:06,837 | INFO     | ***************************************
[2025-11-27 06:36:54] 2025-11-27 13:36:06,837 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:36:54] 2025-11-27 13:36:06,837 | INFO     | ***************************************
[2025-11-27 06:36:54] 2025-11-27 13:36:06,837 | INFO     | 
[2025-11-27 06:36:54] 2025-11-27 13:36:06,838 | INFO     | architecture information:
[2025-11-27 06:36:54] 2025-11-27 13:36:06,839 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:36:54] 2025-11-27 13:36:06,850 | INFO     | cat /etc/os-release:
[2025-11-27 06:36:54] NAME="CentOS Linux"
[2025-11-27 06:36:54] VERSION="7 (Core)"
[2025-11-27 06:36:54] ID="centos"
[2025-11-27 06:36:54] ID_LIKE="rhel fedora"
[2025-11-27 06:36:54] VERSION_ID="7"
[2025-11-27 06:36:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:36:54] ANSI_COLOR="0;31"
[2025-11-27 06:36:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:36:54] HOME_URL="https://www.centos.org/"
[2025-11-27 06:36:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:36:54] 
[2025-11-27 06:36:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:36:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:36:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:36:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:36:54] 
[2025-11-27 06:36:54] 2025-11-27 13:36:06,851 | INFO     | ***************************************
[2025-11-27 06:36:54] 2025-11-27 13:36:07,353 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-27 06:36:54] 2025-11-27 13:36:07,368 | INFO     | sufficient remaining disk space (379427225600 B)
[2025-11-27 06:36:54] 2025-11-27 13:36:07,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:36:54] 2025-11-27 13:36:07,368 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:36:54] 2025-11-27 13:36:07,368 | INFO     | update_server=False
[2025-11-27 06:36:54] 2025-11-27 13:36:07,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:36:54] 2025-11-27 13:36:07,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:36:54] 2025-11-27 13:36:07,506 | INFO     | all data control threads have been joined
[2025-11-27 06:36:54] 2025-11-27 13:36:07,558 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 06:36:54] 2025-11-27 13:36:07,559 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 06:36:54] 2025-11-27 13:36:07,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:36:54] 2025-11-27 13:36:07,559 | INFO     | will abort loop
[2025-11-27 06:36:54] 2025-11-27 13:36:08,373 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:08,373 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:08,509 | INFO     | [data] control thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:08,562 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:08,567 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:08,577 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:08,621 | INFO     | all payload control threads have been joined
[2025-11-27 06:36:54] 2025-11-27 13:36:08,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:08,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:36:54] 2025-11-27 13:36:08,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:36:54] 2025-11-27 13:36:08,984 | INFO     | [job] validate thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:09,075 | INFO     | all job control threads have been joined
[2025-11-27 06:36:54] 2025-11-27 13:36:09,161 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:09,301 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:09,449 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:09,627 | INFO     | [payload] control thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:09,808 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:10,080 | INFO     | [job] control thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:10,839 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:12,692 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:36:54] 2025-11-27 13:36:38,086 | INFO     | PID=133248 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 06:36:54] 2025-11-27 13:36:38,086 | INFO     | .. there are 4 such processes running
[2025-11-27 06:36:54] 2025-11-27 13:36:38,086 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:36:54] 2025-11-27 13:36:38,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:36:54] 2025-11-27 13:36:38,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:36:54] 2025-11-27 13:36:48,067 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:36:54] 2025-11-27 13:36:49,058 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128965971519296)>', '<ExcThread(monitor, started 128965284968192)>']
[2025-11-27 06:36:54] 2025-11-27 13:36:49,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:36:54] 2025-11-27 13:36:49,141 | INFO     | [monitor] control thread has ended
[2025-11-27 06:36:54] 2025-11-27 13:36:54,066 | INFO     | all workflow threads have been joined
[2025-11-27 06:36:54] 2025-11-27 13:36:54,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:36:54] 2025-11-27 13:36:54,066 | INFO     | traces error code: 0
[2025-11-27 06:36:54] 2025-11-27 13:36:54,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:36:54] 2025-11-27 13:36:54,142 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:36:54] 2025-11-27 13:36:54,144 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:36:54] 2025-11-27 13:36:54,146 [wrapper] pilotpid: 133248
[2025-11-27 06:36:54] 2025-11-27 13:36:54,148 [wrapper] Pilot exit status: 0
[2025-11-27 06:36:54] 2025-11-27 13:36:54,154 [wrapper] pandaids: 6898413636
[2025-11-27 06:36:54] 2025-11-27 13:36:54,185 [wrapper] cleanup supervisor_pilot  312879 133249
[2025-11-27 06:36:54] 2025-11-27 13:36:54,187 [wrapper] Test setup, not cleaning
[2025-11-27 06:36:54] 2025-11-27 13:36:54,189 [wrapper] apfmon messages muted
[2025-11-27 06:36:54] 2025-11-27 13:36:54,191 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:36:54] 2025-11-27 13:36:54,192 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:36:54]  *** Error codes and diagnostics ***
[2025-11-27 06:36:54]     "exeErrorCode": 0,
[2025-11-27 06:36:54]     "exeErrorDiag": "",
[2025-11-27 06:36:54]     "pilotErrorCode": 0,
[2025-11-27 06:36:54]     "pilotErrorDiag": "",
[2025-11-27 06:36:54]  *** Listing of results directory ***
[2025-11-27 06:36:54] total 1313620
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc    576529 Nov 26 09:12 pilot3.tar.gz
[2025-11-27 06:36:54] -rwx------ 1 boinc boinc     36292 Nov 26 09:38 runpilot2-wrapper.sh
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc      5112 Nov 26 09:41 queuedata.json
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc       100 Nov 27 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:36:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 00:54 run_atlas
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc       105 Nov 27 00:54 job.xml
[2025-11-27 06:36:54] -rw-r--r-- 2 boinc boinc 410224500 Nov 27 00:54 EVNT.47483658._002630.pool.root.1
[2025-11-27 06:36:54] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:54 start_atlas.sh
[2025-11-27 06:36:54] drwxrwx--x 2 boinc boinc      4096 Nov 27 00:54 shared
[2025-11-27 06:36:54] -rw-r--r-- 2 boinc boinc    590108 Nov 27 00:54 input.tar.gz
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc      9772 Nov 27 00:54 init_data.xml
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc         0 Nov 27 00:54 boinc_lockfile
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc      2787 Nov 27 00:54 pandaJob.out
[2025-11-27 06:36:54] -rw------- 1 boinc boinc    991570 Nov 27 00:54 agis_schedconf.cvmfs.json
[2025-11-27 06:36:54] drwx------ 5 boinc boinc      4096 Nov 27 00:54 pilot3
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc       533 Nov 27 06:29 boinc_task_state.xml
[2025-11-27 06:36:54] -rw------- 1 boinc boinc 921800083 Nov 27 06:35 HITS.47556161._006126.pool.root.1
[2025-11-27 06:36:54] -rw------- 1 boinc boinc      1036 Nov 27 06:35 memory_monitor_summary.json
[2025-11-27 06:36:54] -rw------- 1 boinc boinc   1516240 Nov 27 06:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:36:54] -rw------- 1 boinc boinc   1643078 Nov 27 06:35 log.47556161._006126.job.log.tgz.1
[2025-11-27 06:36:54] -rw------- 1 boinc boinc        95 Nov 27 06:35 pilot_heartbeat.json
[2025-11-27 06:36:54] -rw------- 1 boinc boinc      8593 Nov 27 06:36 heartbeat.json
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc      8192 Nov 27 06:36 boinc_mmap_file
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc        29 Nov 27 06:36 wrapper_checkpoint.txt
[2025-11-27 06:36:54] -rw------- 1 boinc boinc      5016 Nov 27 06:36 pilotlog.txt
[2025-11-27 06:36:54] -rw------- 1 boinc boinc   2954745 Nov 27 06:36 log.47556161._006126.job.log.1
[2025-11-27 06:36:54] -rw------- 1 boinc boinc       353 Nov 27 06:36 output.list
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc       620 Nov 27 06:36 runtime_log
[2025-11-27 06:36:54] -rw------- 1 boinc boinc   4618240 Nov 27 06:36 result.tar.gz
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc      8968 Nov 27 06:36 runtime_log.err
[2025-11-27 06:36:54] -rw------- 1 boinc boinc       664 Nov 27 06:36 7dYNDmliXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdBKKDmlLRhsn.diag
[2025-11-27 06:36:54] -rw-r--r-- 1 boinc boinc     21435 Nov 27 06:36 stderr.txt
[2025-11-27 06:36:54] HITS file was successfully produced:
[2025-11-27 06:36:54] -rw------- 1 boinc boinc 921800083 Nov 27 06:35 shared/HITS.pool.root.1
[2025-11-27 06:36:54]  *** Contents of shared directory: ***
[2025-11-27 06:36:54] total 1305924
[2025-11-27 06:36:54] -rw-r--r-- 2 boinc boinc 410224500 Nov 27 00:54 ATLAS.root_0
[2025-11-27 06:36:54] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:54 start_atlas.sh
[2025-11-27 06:36:54] -rw-r--r-- 2 boinc boinc    590108 Nov 27 00:54 input.tar.gz
[2025-11-27 06:36:54] -rw------- 1 boinc boinc 921800083 Nov 27 06:35 HITS.pool.root.1
[2025-11-27 06:36:54] -rw------- 1 boinc boinc   4618240 Nov 27 06:36 result.tar.gz
06:36:55 (127279): run_atlas exited; CPU time 153507.403983
06:36:55 (127279): called boinc_finish(0)

</stderr_txt>
]]>

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