Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:01:08 (3991966): wrapper (7.7.26015): starting
23:01:08 (3991966): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:01:08] Arguments: --nthreads 8
[2025-11-26 23:01:08] Threads: 8
[2025-11-26 23:01:08] Checking for CVMFS
[2025-11-26 23:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:01:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:01:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:01:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:01:08] 2.13.3.0 12763 30936 217796 153345 1 411 34569450 40960000 62943 16776704 0 274320606 99.745 166815388 35532 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 23:01:08] CVMFS is ok
[2025-11-26 23:01:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:01:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:01:08] Further information can be found at the LHC@home message board.
[2025-11-26 23:01:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:01:08] Checking for apptainer binary...
[2025-11-26 23:01:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:01:08] Running /usr/bin/apptainer --version
[2025-11-26 23:01:08] apptainer version 1.4.4-1.el9
[2025-11-26 23:01:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:01:08] c7-2-17.aglt2.org
[2025-11-26 23:01:08] apptainer works
[2025-11-26 23:01:08] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:01:08] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:01:08] Starting ATLAS job with PandaID=6898377797
[2025-11-26 23:01:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:03:37]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:03:38] 2025-11-27 14:02:55,772 | INFO     | time since job start (36088s) is within the limit (172800.0s)
[2025-11-27 09:03:38] 2025-11-27 14:02:56,271 | INFO     | monitor loop #2172: job 0:6898377797 is in state 'finished'
[2025-11-27 09:03:38] 2025-11-27 14:02:56,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,071 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 09:03:38] 2025-11-27 14:02:57,084 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3411.331031250001
[2025-11-27 09:03:38] 2025-11-27 14:02:57,200 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898377797/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,200 | INFO     | extracted standard info from prmon json
[2025-11-27 09:03:38] 2025-11-27 14:02:57,201 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:03:38] 2025-11-27 14:02:57,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:03:38] 2025-11-27 14:02:57,208 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:03:38] 2025-11-27 14:02:57,208 | INFO     | sum of square deviations: 64006027429.69893
[2025-11-27 09:03:38] 2025-11-27 14:02:57,214 | INFO     | sum of deviations: 549237658784.2706
[2025-11-27 09:03:38] 2025-11-27 14:02:57,214 | INFO     | mean x: 1764234115.4906938
[2025-11-27 09:03:38] 2025-11-27 14:02:57,214 | INFO     | mean y: 2903908.41285956
[2025-11-27 09:03:38] 2025-11-27 14:02:57,214 | INFO     | intersect: -15136042438.534407
[2025-11-27 09:03:38] 2025-11-27 14:02:57,215 | INFO     | chi2: 5.677823448890105
[2025-11-27 09:03:38] 2025-11-27 14:02:57,215 | INFO     | sum of square deviations: 62395229860.984535
[2025-11-27 09:03:38] 2025-11-27 14:02:57,221 | INFO     | sum of deviations: 732774583675.2441
[2025-11-27 09:03:38] 2025-11-27 14:02:57,222 | INFO     | mean x: 1764233962.9948804
[2025-11-27 09:03:38] 2025-11-27 14:02:57,222 | INFO     | mean y: 2921276.0819112626
[2025-11-27 09:03:38] 2025-11-27 14:02:57,222 | INFO     | intersect: -20716383879.45006
[2025-11-27 09:03:38] 2025-11-27 14:02:57,222 | INFO     | chi2: 2.9233037638304564
[2025-11-27 09:03:38] 2025-11-27 14:02:57,222 | INFO     | current chi2=2.9233037638304564 (change=48.513655097854425 %)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,223 | INFO     | sum of square deviations: 60811688617.24971
[2025-11-27 09:03:38] 2025-11-27 14:02:57,229 | INFO     | sum of deviations: 756969491672.8295
[2025-11-27 09:03:38] 2025-11-27 14:02:57,229 | INFO     | mean x: 1764233810.4991393
[2025-11-27 09:03:38] 2025-11-27 14:02:57,229 | INFO     | mean y: 2923589.6592082614
[2025-11-27 09:03:38] 2025-11-27 14:02:57,229 | INFO     | intersect: -21957840879.99796
[2025-11-27 09:03:38] 2025-11-27 14:02:57,230 | INFO     | chi2: 2.7243911176090925
[2025-11-27 09:03:38] 2025-11-27 14:02:57,230 | INFO     | current chi2=2.7243911176090925 (change=6.8043782751035495 %)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,230 | INFO     | right removable region: 580
[2025-11-27 09:03:38] 2025-11-27 14:02:57,231 | INFO     | sum of square deviations: 62395052960.984505
[2025-11-27 09:03:38] 2025-11-27 14:02:57,237 | INFO     | sum of deviations: 373733546703.6718
[2025-11-27 09:03:38] 2025-11-27 14:02:57,237 | INFO     | mean x: 1764234267.9948804
[2025-11-27 09:03:38] 2025-11-27 14:02:57,237 | INFO     | mean y: 2920491.890784983
[2025-11-27 09:03:38] 2025-11-27 14:02:57,237 | INFO     | intersect: -10564480269.932035
[2025-11-27 09:03:38] 2025-11-27 14:02:57,238 | INFO     | chi2: 3.111033236349794
[2025-11-27 09:03:38] 2025-11-27 14:02:57,238 | INFO     | current chi2=3.111033236349794 (change=45.2072917667432 %)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,238 | INFO     | sum of square deviations: 60811442055.22884
[2025-11-27 09:03:38] 2025-11-27 14:02:57,244 | INFO     | sum of deviations: 340737771184.62683
[2025-11-27 09:03:38] 2025-11-27 14:02:57,245 | INFO     | mean x: 1764234420.4939759
[2025-11-27 09:03:38] 2025-11-27 14:02:57,245 | INFO     | mean y: 2923666.8932874356
[2025-11-27 09:03:38] 2025-11-27 14:02:57,245 | INFO     | intersect: -9882408500.37161
[2025-11-27 09:03:38] 2025-11-27 14:02:57,246 | INFO     | chi2: 3.0731680099561753
[2025-11-27 09:03:38] 2025-11-27 14:02:57,246 | INFO     | current chi2=3.0731680099561753 (change=1.2171270287695866 %)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,246 | INFO     | left removable region: 20
[2025-11-27 09:03:38] 2025-11-27 14:02:57,246 | INFO     | sum of square deviations: 54452780333.99272
[2025-11-27 09:03:38] 2025-11-27 14:02:57,252 | INFO     | sum of deviations: 502875474285.91815
[2025-11-27 09:03:38] 2025-11-27 14:02:57,252 | INFO     | mean x: 1764234390.0035715
[2025-11-27 09:03:38] 2025-11-27 14:02:57,252 | INFO     | mean y: 2948320.0410714285
[2025-11-27 09:03:38] 2025-11-27 14:02:57,252 | INFO     | intersect: -16289887420.997034
[2025-11-27 09:03:38] 2025-11-27 14:02:57,253 | INFO     | chi2: 0.07085119565053678
[2025-11-27 09:03:38] 2025-11-27 14:02:57,253 | INFO     | current memory leak: 9.24 B/s (using 560 data points, chi2=0.07)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | could have reported an average CPU frequency of 3356 MHz (23 samples)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | ..............................
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . Timing measurements:
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . get job = 0 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . initial setup = 6 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . payload setup = 8 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . stage-in = 0 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . payload execution = 36047 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . stage-out = 3 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | . log creation = 0 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,254 | INFO     | ..............................
[2025-11-27 09:03:38] 2025-11-27 14:02:57,314 | INFO     | 
[2025-11-27 09:03:38] 2025-11-27 14:02:57,314 | INFO     | job summary report
[2025-11-27 09:03:38] 2025-11-27 14:02:57,314 | INFO     | --------------------------------------------------
[2025-11-27 09:03:38] 2025-11-27 14:02:57,314 | INFO     | PanDA job id: 6898377797
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | task id: 47556161
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | errors: (none)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | pilot state: finished 
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | transexitcode: 0
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | exeerrorcode: 0
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | exeerrordiag: 
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | exitcode: 0
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | exitmsg: OK
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | cpuconsumptiontime: 184802 s
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | nevents: 1000
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | neventsw: 0
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | pid: 4006148
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | pgrp: 4006148
[2025-11-27 09:03:38] 2025-11-27 14:02:57,315 | INFO     | corecount: 8
[2025-11-27 09:03:38] 2025-11-27 14:02:57,316 | INFO     | event service: False
[2025-11-27 09:03:38] 2025-11-27 14:02:57,316 | INFO     | sizes: {0: 2284145, 1: 2284344, 6: 2284606, 11: 2284634, 36055: 2326078, 36056: 2326077, 36061: 2335255, 36064: 2335311, 36072: 2335557}
[2025-11-27 09:03:38] 2025-11-27 14:02:57,316 | INFO     | --------------------------------------------------
[2025-11-27 09:03:38] 2025-11-27 14:02:57,316 | INFO     | 
[2025-11-27 09:03:38] 2025-11-27 14:02:57,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 09:03:38] 2025-11-27 14:02:57,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:03:38] 2025-11-27 14:02:57,338 | INFO     | job 6898377797 has completed (purged errors)
[2025-11-27 09:03:38] 2025-11-27 14:02:57,338 | INFO     | overall cleanup function is called
[2025-11-27 09:03:38] 2025-11-27 14:02:58,361 | INFO     | --- collectZombieJob: --- 10, [4006148]
[2025-11-27 09:03:38] 2025-11-27 14:02:58,361 | INFO     | zombie collector waiting for pid 4006148
[2025-11-27 09:03:38] 2025-11-27 14:02:58,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:03:38] 2025-11-27 14:02:58,362 | INFO     | collected zombie processes
[2025-11-27 09:03:38] 2025-11-27 14:02:58,362 | INFO     | will attempt to kill all subprocesses of pid=4006148
[2025-11-27 09:03:38] 2025-11-27 14:02:59,140 | INFO     | process IDs to be killed: [4006148] (in reverse order)
[2025-11-27 09:03:38] 2025-11-27 14:02:59,395 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:03:38] 2025-11-27 14:02:59,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:03:38] 2025-11-27 14:02:59,427 | INFO     | did not find any defunct processes belonging to 4006148
[2025-11-27 09:03:38] 2025-11-27 14:02:59,459 | INFO     | did not find any defunct processes belonging to 4006148
[2025-11-27 09:03:38] 2025-11-27 14:02:59,460 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:03:38] 2025-11-27 14:02:59,460 | INFO     | ready for new job
[2025-11-27 09:03:38] 2025-11-27 14:02:59,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:03:38] 2025-11-27 14:02:59,463 | INFO     | ***************************************
[2025-11-27 09:03:38] 2025-11-27 14:02:59,463 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:03:38] 2025-11-27 14:02:59,463 | INFO     | ***************************************
[2025-11-27 09:03:38] 2025-11-27 14:02:59,463 | INFO     | 
[2025-11-27 09:03:38] 2025-11-27 14:02:59,467 | INFO     | architecture information:
[2025-11-27 09:03:38] 2025-11-27 14:02:59,467 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:03:38] 2025-11-27 14:02:59,513 | INFO     | cat /etc/os-release:
[2025-11-27 09:03:38] NAME="CentOS Linux"
[2025-11-27 09:03:38] VERSION="7 (Core)"
[2025-11-27 09:03:38] ID="centos"
[2025-11-27 09:03:38] ID_LIKE="rhel fedora"
[2025-11-27 09:03:38] VERSION_ID="7"
[2025-11-27 09:03:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:03:38] ANSI_COLOR="0;31"
[2025-11-27 09:03:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:03:38] HOME_URL="https://www.centos.org/"
[2025-11-27 09:03:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:03:38] 
[2025-11-27 09:03:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:03:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:03:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:03:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:03:38] 
[2025-11-27 09:03:38] 2025-11-27 14:02:59,514 | INFO     | ***************************************
[2025-11-27 09:03:38] 2025-11-27 14:03:00,017 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 09:03:38] 2025-11-27 14:03:00,136 | INFO     | sufficient remaining disk space (116905738240 B)
[2025-11-27 09:03:38] 2025-11-27 14:03:00,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:03:38] 2025-11-27 14:03:00,137 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:03:38] 2025-11-27 14:03:00,137 | INFO     | update_server=False
[2025-11-27 09:03:38] 2025-11-27 14:03:00,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:03:38] 2025-11-27 14:03:00,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:03:38] 2025-11-27 14:03:00,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:03:38] 2025-11-27 14:03:00,141 | INFO     | aborting loop
[2025-11-27 09:03:38] 2025-11-27 14:03:00,785 | INFO     | all data control threads have been joined
[2025-11-27 09:03:38] 2025-11-27 14:03:00,993 | INFO     | all payload control threads have been joined
[2025-11-27 09:03:38] 2025-11-27 14:03:01,142 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:01,147 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:01,208 | INFO     | all job control threads have been joined
[2025-11-27 09:03:38] 2025-11-27 14:03:01,442 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:01,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:03:38] 2025-11-27 14:03:01,791 | INFO     | [data] control thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:01,852 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:01,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:01,999 | INFO     | [payload] control thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:02,219 | INFO     | [job] control thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:02,254 | INFO     | [job] validate thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:02,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:03:38] 2025-11-27 14:03:02,387 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:02,402 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:02,473 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:02,691 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:03,335 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:03,453 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:04,146 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:03:38] 2025-11-27 14:03:29,889 | INFO     | PID=3995808 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:03:38] 2025-11-27 14:03:29,890 | INFO     | .. there are 88 such processes running
[2025-11-27 09:03:38] 2025-11-27 14:03:29,890 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:03:38] 2025-11-27 14:03:29,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:03:38] 2025-11-27 14:03:29,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:03:38] 2025-11-27 14:03:30,300 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:03:38] 2025-11-27 14:03:32,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627895916352)>', '<ExcThread(monitor, started 139626970871552)>']
[2025-11-27 09:03:38] 2025-11-27 14:03:32,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:03:38] 2025-11-27 14:03:32,907 | INFO     | [monitor] control thread has ended
[2025-11-27 09:03:38] 2025-11-27 14:03:37,176 | INFO     | all workflow threads have been joined
[2025-11-27 09:03:38] 2025-11-27 14:03:37,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:03:38] 2025-11-27 14:03:37,176 | INFO     | traces error code: 0
[2025-11-27 09:03:38] 2025-11-27 14:03:37,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:03:38] 2025-11-27 14:03:37,355 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:03:38] 2025-11-27 14:03:37,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:03:38] 2025-11-27 14:03:37,366 [wrapper] pilotpid: 3995808
[2025-11-27 09:03:38] 2025-11-27 14:03:37,370 [wrapper] Pilot exit status: 0
[2025-11-27 09:03:38] 2025-11-27 14:03:37,390 [wrapper] pandaids: 6898377797
[2025-11-27 09:03:38] 2025-11-27 14:03:37,596 [wrapper] cleanup supervisor_pilot 3024161 3995809
[2025-11-27 09:03:38] 2025-11-27 14:03:37,602 [wrapper] Test setup, not cleaning
[2025-11-27 09:03:38] 2025-11-27 14:03:37,608 [wrapper] apfmon messages muted
[2025-11-27 09:03:38] 2025-11-27 14:03:37,628 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:03:38] 2025-11-27 14:03:37,651 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:03:38]  *** Error codes and diagnostics ***
[2025-11-27 09:03:38]     "exeErrorCode": 0,
[2025-11-27 09:03:38]     "exeErrorDiag": "",
[2025-11-27 09:03:38]     "pilotErrorCode": 0,
[2025-11-27 09:03:38]     "pilotErrorDiag": "",
[2025-11-27 09:03:38]  *** Listing of results directory ***
[2025-11-27 09:03:38] total 1311700
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 09:03:38] -rwx------. 1 boincer umatlas     36292 Nov 26 11:38 runpilot2-wrapper.sh
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas       100 Nov 26 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:03:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 23:01 run_atlas
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas       105 Nov 26 23:01 job.xml
[2025-11-27 09:03:38] -rw-r--r--. 2 boincer umatlas 410784785 Nov 26 23:01 EVNT.47483658._002583.pool.root.1
[2025-11-27 09:03:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:01 start_atlas.sh
[2025-11-27 09:03:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 23:01 shared
[2025-11-27 09:03:38] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 23:01 input.tar.gz
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas         0 Nov 26 23:01 boinc_lockfile
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas      2787 Nov 26 23:01 pandaJob.out
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas        57 Nov 26 23:01 setup.sh.local
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas    991546 Nov 26 23:01 agis_schedconf.cvmfs.json
[2025-11-27 09:03:38] drwx------. 5 boincer umatlas      4096 Nov 26 23:01 pilot3
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas       532 Nov 27 08:53 boinc_task_state.xml
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 08:54 init_data.xml
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas 915664166 Nov 27 09:02 HITS.47556161._005655.pool.root.1
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas      1073 Nov 27 09:02 memory_monitor_summary.json
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas   1828353 Nov 27 09:02 log.47556161._005655.job.log.tgz.1
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas      8643 Nov 27 09:02 heartbeat.json
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas        95 Nov 27 09:03 pilot_heartbeat.json
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:03 boinc_mmap_file
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:03 wrapper_checkpoint.txt
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas      4825 Nov 27 09:03 pilotlog.txt
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas   4575925 Nov 27 09:03 log.47556161._005655.job.log.1
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas       353 Nov 27 09:03 output.list
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:03 runtime_log
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas   6420480 Nov 27 09:03 result.tar.gz
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 09:03 runtime_log.err
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas       665 Nov 27 09:03 bpIKDmliXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCHNKDmEQJnFn.diag
[2025-11-27 09:03:38] -rw-r--r--. 1 boincer umatlas     21361 Nov 27 09:03 stderr.txt
[2025-11-27 09:03:38] HITS file was successfully produced:
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas 915664166 Nov 27 09:02 shared/HITS.pool.root.1
[2025-11-27 09:03:38]  *** Contents of shared directory: ***
[2025-11-27 09:03:38] total 1302240
[2025-11-27 09:03:38] -rw-r--r--. 2 boincer umatlas 410784785 Nov 26 23:01 ATLAS.root_0
[2025-11-27 09:03:38] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:01 start_atlas.sh
[2025-11-27 09:03:38] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 23:01 input.tar.gz
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas 915664166 Nov 27 09:02 HITS.pool.root.1
[2025-11-27 09:03:38] -rw-------. 1 boincer umatlas   6420480 Nov 27 09:03 result.tar.gz
09:03:39 (3991966): run_atlas exited; CPU time 186017.666842
09:03:39 (3991966): called boinc_finish(0)

</stderr_txt>
]]>

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