Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:47 (459405): wrapper (7.7.26015): starting
00:02:47 (459405): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:02:47] Arguments: --nthreads 9
[2025-11-27 00:02:47] Threads: 9
[2025-11-27 00:02:47] Checking for CVMFS
[2025-11-27 00:02:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:49] 2.13.3.0 10121 30997 435596 153347 0 617 28339096 32935936 75790 16776704 0 351204625 99.785 183015124 27427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:49] CVMFS is ok
[2025-11-27 00:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:49] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:49] Checking for apptainer binary...
[2025-11-27 00:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:49] Running /usr/bin/apptainer --version
[2025-11-27 00:02:49] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:50] lc-10-11.aglt2.org
[2025-11-27 00:02:50] apptainer works
[2025-11-27 00:02:50] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:02:50] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:02:50] Starting ATLAS job with PandaID=6892547980
[2025-11-27 00:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:45:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:45:56] 2025-11-28 02:45:20,256 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2648.5476770833334
[2025-11-27 21:45:56] 2025-11-28 02:45:20,278 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6892547980/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,278 | INFO     | extracted standard info from prmon json
[2025-11-27 21:45:56] 2025-11-28 02:45:20,279 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:45:56] 2025-11-28 02:45:20,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:45:56] 2025-11-28 02:45:20,302 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:45:56] 2025-11-28 02:45:20,303 | INFO     | sum of square deviations: 645728270742.7546
[2025-11-27 21:45:56] 2025-11-28 02:45:20,336 | INFO     | time since job start (78075s) is within the limit (172800.0s)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,348 | INFO     | sum of deviations: 4105866790043.668
[2025-11-27 21:45:56] 2025-11-28 02:45:20,348 | INFO     | mean x: 1764258937.2787783
[2025-11-27 21:45:56] 2025-11-28 02:45:20,349 | INFO     | mean y: 2998388.5599060296
[2025-11-27 21:45:56] 2025-11-28 02:45:20,349 | INFO     | intersect: -11215051846.840832
[2025-11-27 21:45:56] 2025-11-28 02:45:20,350 | INFO     | chi2: 13.811840217380935
[2025-11-27 21:45:56] 2025-11-28 02:45:20,352 | INFO     | sum of square deviations: 638173891026.6892
[2025-11-27 21:45:56] 2025-11-28 02:45:20,388 | INFO     | sum of deviations: 4564079619503.289
[2025-11-27 21:45:56] 2025-11-28 02:45:20,388 | INFO     | mean x: 1764258784.787736
[2025-11-27 21:45:56] 2025-11-28 02:45:20,388 | INFO     | mean y: 3007637.4418238993
[2025-11-27 21:45:56] 2025-11-28 02:45:20,388 | INFO     | intersect: -12614584019.629887
[2025-11-27 21:45:56] 2025-11-28 02:45:20,390 | INFO     | chi2: 10.565982531264964
[2025-11-27 21:45:56] 2025-11-28 02:45:20,390 | INFO     | current chi2=10.565982531264964 (change=23.500544714029896 %)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,390 | INFO     | right removable region: 1271
[2025-11-27 21:45:56] 2025-11-28 02:45:20,392 | INFO     | sum of square deviations: 638172115926.6891
[2025-11-27 21:45:56] 2025-11-28 02:45:20,425 | INFO     | sum of deviations: 3563537300953.7305
[2025-11-27 21:45:56] 2025-11-28 02:45:20,425 | INFO     | mean x: 1764259089.787736
[2025-11-27 21:45:56] 2025-11-28 02:45:20,425 | INFO     | mean y: 3009333.021226415
[2025-11-27 21:45:56] 2025-11-28 02:45:20,426 | INFO     | intersect: -9848569759.988695
[2025-11-27 21:45:56] 2025-11-28 02:45:20,427 | INFO     | chi2: 9.439195815010839
[2025-11-27 21:45:56] 2025-11-28 02:45:20,427 | INFO     | current chi2=9.439195815010839 (change=31.658666285956045 %)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,429 | INFO     | sum of square deviations: 630675125010.4161
[2025-11-27 21:45:56] 2025-11-28 02:45:20,465 | INFO     | sum of deviations: 3094611488619.2017
[2025-11-27 21:45:56] 2025-11-28 02:45:20,465 | INFO     | mean x: 1764259242.296764
[2025-11-27 21:45:56] 2025-11-28 02:45:20,466 | INFO     | mean y: 3018871.2920284136
[2025-11-27 21:45:56] 2025-11-28 02:45:20,466 | INFO     | intersect: -8653889739.181553
[2025-11-27 21:45:56] 2025-11-28 02:45:20,467 | INFO     | chi2: 6.2900518596360815
[2025-11-27 21:45:56] 2025-11-28 02:45:20,468 | INFO     | current chi2=6.2900518596360815 (change=33.36241791241134 %)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,469 | INFO     | sum of square deviations: 623237142478.0476
[2025-11-27 21:45:56] 2025-11-28 02:45:20,481 | INFO     | monitor loop #3946: job 0:6892547980 is in state 'finished'
[2025-11-27 21:45:56] 2025-11-28 02:45:20,481 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,505 | INFO     | sum of deviations: 2799079489602.3525
[2025-11-27 21:45:56] 2025-11-28 02:45:20,505 | INFO     | mean x: 1764259394.8050714
[2025-11-27 21:45:56] 2025-11-28 02:45:20,505 | INFO     | mean y: 3024927.7575277337
[2025-11-27 21:45:56] 2025-11-28 02:45:20,505 | INFO     | intersect: -7920607907.573812
[2025-11-27 21:45:56] 2025-11-28 02:45:20,507 | INFO     | chi2: 5.0745879679617545
[2025-11-27 21:45:56] 2025-11-28 02:45:20,507 | INFO     | current chi2=5.0745879679617545 (change=19.323590946429004 %)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,507 | INFO     | left removable region: 30
[2025-11-27 21:45:56] 2025-11-28 02:45:20,509 | INFO     | sum of square deviations: 592640611823.0658
[2025-11-27 21:45:56] 2025-11-28 02:45:20,543 | INFO     | sum of deviations: 3054314280902.426
[2025-11-27 21:45:56] 2025-11-28 02:45:20,544 | INFO     | mean x: 1764259669.3134568
[2025-11-27 21:45:56] 2025-11-28 02:45:20,544 | INFO     | mean y: 3042931.219983884
[2025-11-27 21:45:56] 2025-11-28 02:45:20,544 | INFO     | intersect: -9089488690.310305
[2025-11-27 21:45:56] 2025-11-28 02:45:20,545 | INFO     | chi2: 0.7556738711571757
[2025-11-27 21:45:56] 2025-11-28 02:45:20,546 | INFO     | current memory leak: 5.15 B/s (using 1241 data points, chi2=0.76)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,547 | INFO     | could have reported an average CPU frequency of 2695 MHz (46 samples)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,547 | INFO     | ..............................
[2025-11-27 21:45:56] 2025-11-28 02:45:20,547 | INFO     | . Timing measurements:
[2025-11-27 21:45:56] 2025-11-28 02:45:20,547 | INFO     | . get job = 0 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,547 | INFO     | . initial setup = 5 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,547 | INFO     | . payload setup = 55 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,548 | INFO     | . stage-in = 0 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,548 | INFO     | . payload execution = 77903 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,548 | INFO     | . stage-out = 8 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,548 | INFO     | . log creation = 1 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,548 | INFO     | ..............................
[2025-11-27 21:45:56] 2025-11-28 02:45:20,652 | INFO     | 
[2025-11-27 21:45:56] 2025-11-28 02:45:20,652 | INFO     | job summary report
[2025-11-27 21:45:56] 2025-11-28 02:45:20,652 | INFO     | --------------------------------------------------
[2025-11-27 21:45:56] 2025-11-28 02:45:20,652 | INFO     | PanDA job id: 6892547980
[2025-11-27 21:45:56] 2025-11-28 02:45:20,652 | INFO     | task id: 47493029
[2025-11-27 21:45:56] 2025-11-28 02:45:20,652 | INFO     | errors: (none)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | pilot state: finished 
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | transexitcode: 0
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | exeerrorcode: 0
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | exeerrordiag: 
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | exitcode: 0
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | exitmsg: OK
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | cpuconsumptiontime: 261457 s
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | nevents: 1000
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | neventsw: 0
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | pid: 487714
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | pgrp: 487714
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | corecount: 9
[2025-11-27 21:45:56] 2025-11-28 02:45:20,653 | INFO     | event service: False
[2025-11-27 21:45:56] 2025-11-28 02:45:20,654 | INFO     | sizes: {0: 2283476, 1: 2284161, 2: 2284360, 13: 2284360, 24: 2284416, 35: 2284444, 38: 2284862, 47: 2284890, 77963: 2344788, 77972: 2353810, 77974: 2353866, 77994:
[2025-11-27 21:45:56] 2025-11-28 02:45:20,654 | INFO     | --------------------------------------------------
[2025-11-27 21:45:56] 2025-11-28 02:45:20,654 | INFO     | 
[2025-11-27 21:45:56] 2025-11-28 02:45:20,654 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 21:45:56] 2025-11-28 02:45:20,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,722 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:45:56] 2025-11-28 02:45:20,722 | INFO     | job 6892547980 has completed (purged errors)
[2025-11-27 21:45:56] 2025-11-28 02:45:20,722 | INFO     | overall cleanup function is called
[2025-11-27 21:45:56] 2025-11-28 02:45:21,756 | INFO     | --- collectZombieJob: --- 10, [487714]
[2025-11-27 21:45:56] 2025-11-28 02:45:21,757 | INFO     | zombie collector waiting for pid 487714
[2025-11-27 21:45:56] 2025-11-28 02:45:21,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:45:56] 2025-11-28 02:45:21,757 | INFO     | collected zombie processes
[2025-11-27 21:45:56] 2025-11-28 02:45:21,757 | INFO     | will attempt to kill all subprocesses of pid=487714
[2025-11-27 21:45:56] 2025-11-28 02:45:23,228 | INFO     | process IDs to be killed: [487714] (in reverse order)
[2025-11-27 21:45:56] 2025-11-28 02:45:23,506 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:45:56] 2025-11-28 02:45:23,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:45:56] 2025-11-28 02:45:23,617 | INFO     | did not find any defunct processes belonging to 487714
[2025-11-27 21:45:56] 2025-11-28 02:45:23,721 | INFO     | did not find any defunct processes belonging to 487714
[2025-11-27 21:45:56] 2025-11-28 02:45:23,729 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:45:56] 2025-11-28 02:45:23,729 | INFO     | ready for new job
[2025-11-27 21:45:56] 2025-11-28 02:45:23,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:45:56] 2025-11-28 02:45:23,746 | INFO     | ***************************************
[2025-11-27 21:45:56] 2025-11-28 02:45:23,746 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:45:56] 2025-11-28 02:45:23,747 | INFO     | ***************************************
[2025-11-27 21:45:56] 2025-11-28 02:45:23,747 | INFO     | 
[2025-11-27 21:45:56] 2025-11-28 02:45:23,753 | INFO     | architecture information:
[2025-11-27 21:45:56] 2025-11-28 02:45:23,757 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:45:56] 2025-11-28 02:45:23,820 | INFO     | cat /etc/os-release:
[2025-11-27 21:45:56] NAME="CentOS Linux"
[2025-11-27 21:45:56] VERSION="7 (Core)"
[2025-11-27 21:45:56] ID="centos"
[2025-11-27 21:45:56] ID_LIKE="rhel fedora"
[2025-11-27 21:45:56] VERSION_ID="7"
[2025-11-27 21:45:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:45:56] ANSI_COLOR="0;31"
[2025-11-27 21:45:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:45:56] HOME_URL="https://www.centos.org/"
[2025-11-27 21:45:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:45:56] 
[2025-11-27 21:45:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:45:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:45:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:45:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:45:56] 
[2025-11-27 21:45:56] 2025-11-28 02:45:23,820 | INFO     | ***************************************
[2025-11-27 21:45:56] 2025-11-28 02:45:24,325 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 21:45:56] 2025-11-28 02:45:24,435 | INFO     | sufficient remaining disk space (89795854336 B)
[2025-11-27 21:45:56] 2025-11-28 02:45:24,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:45:56] 2025-11-28 02:45:24,436 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:45:56] 2025-11-28 02:45:24,436 | INFO     | update_server=False
[2025-11-27 21:45:56] 2025-11-28 02:45:24,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:45:56] 2025-11-28 02:45:24,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:45:56] 2025-11-28 02:45:24,436 | INFO     | aborting loop
[2025-11-27 21:45:56] 2025-11-28 02:45:24,717 | INFO     | all job control threads have been joined
[2025-11-27 21:45:56] 2025-11-28 02:45:24,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:45:56] 2025-11-28 02:45:24,816 | INFO     | all data control threads have been joined
[2025-11-27 21:45:56] 2025-11-28 02:45:24,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:45:56] 2025-11-28 02:45:25,339 | INFO     | all payload control threads have been joined
[2025-11-27 21:45:56] 2025-11-28 02:45:25,444 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,445 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,451 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:45:56] 2025-11-28 02:45:25,700 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,739 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,744 | INFO     | [job] control thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,817 | INFO     | [job] validate thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,823 | INFO     | [data] control thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,934 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:25,936 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:26,324 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:26,325 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:26,345 | INFO     | [payload] control thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:26,675 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:26,765 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:28,977 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:45:56] 2025-11-28 02:45:31,529 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:45:56] 2025-11-28 02:45:33,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386564175680)>', '<ExcThread(monitor, started 140386198595328)>']
[2025-11-27 21:45:56] 2025-11-28 02:45:38,648 | INFO     | all workflow threads have been joined
[2025-11-27 21:45:56] 2025-11-28 02:45:38,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:45:56] 2025-11-28 02:45:38,649 | INFO     | traces error code: 0
[2025-11-27 21:45:56] 2025-11-28 02:45:38,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:45:56] 2025-11-28 02:45:55,184 | INFO     | PID=468837 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 21:45:56] 2025-11-28 02:45:55,184 | INFO     | .. there are 100 such processes running
[2025-11-27 21:45:56] 2025-11-28 02:45:55,184 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:45:56] 2025-11-28 02:45:55,184 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:45:56] 2025-11-28 02:45:55,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:45:56] 2025-11-28 02:45:55,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:45:56] 2025-11-28 02:45:55,185 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 21:45:56] 2025-11-28 02:45:55,185 | INFO     | [monitor] control thread has ended
[2025-11-27 21:45:56] 2025-11-28 02:45:55,384 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:45:56] 2025-11-28 02:45:55,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:45:56] 2025-11-28 02:45:55,468 [wrapper] pilotpid: 468837
[2025-11-27 21:45:56] 2025-11-28 02:45:55,516 [wrapper] Pilot exit status: 0
[2025-11-27 21:45:56] 2025-11-28 02:45:55,554 [wrapper] pandaids: 6892547980
[2025-11-27 21:45:56] 2025-11-28 02:45:55,784 [wrapper] cleanup supervisor_pilot 1249452 468838
[2025-11-27 21:45:56] 2025-11-28 02:45:55,791 [wrapper] Test setup, not cleaning
[2025-11-27 21:45:56] 2025-11-28 02:45:55,812 [wrapper] apfmon messages muted
[2025-11-27 21:45:56] 2025-11-28 02:45:55,835 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:45:56] 2025-11-28 02:45:55,857 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:45:56]  *** Error codes and diagnostics ***
[2025-11-27 21:45:56]     "exeErrorCode": 0,
[2025-11-27 21:45:56]     "exeErrorDiag": "",
[2025-11-27 21:45:56]     "pilotErrorCode": 0,
[2025-11-27 21:45:56]     "pilotErrorDiag": "",
[2025-11-27 21:45:56]  *** Listing of results directory ***
[2025-11-27 21:45:56] total 1323056
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 03:39 queuedata.json
[2025-11-27 21:45:56] -rwx------. 1 boincer umatlas     36292 Nov 19 03:40 runpilot2-wrapper.sh
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:45:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 21:45:56] -rw-r--r--. 2 boincer umatlas 409966225 Nov 27 00:02 EVNT.47493027._000328.pool.root.1
[2025-11-27 21:45:56] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:02 start_atlas.sh
[2025-11-27 21:45:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 21:45:56] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 00:02 input.tar.gz
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 00:02 pandaJob.out
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 21:45:56] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:32 boinc_task_state.xml
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas      6888 Nov 27 21:36 init_data.xml
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas 918297399 Nov 27 21:44 HITS.47493029._003233.pool.root.1
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas      1058 Nov 27 21:44 memory_monitor_summary.json
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:44 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas   2392779 Nov 27 21:44 log.47493029._003233.job.log.tgz.1
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas        95 Nov 27 21:45 pilot_heartbeat.json
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas      8636 Nov 27 21:45 heartbeat.json
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas       893 Nov 27 21:45 pilotlog.txt
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:45 boinc_mmap_file
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas   8920020 Nov 27 21:45 log.47493029._003233.job.log.1
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:45 wrapper_checkpoint.txt
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas       353 Nov 27 21:45 output.list
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:45 runtime_log
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas  11335680 Nov 27 21:45 result.tar.gz
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas      8704 Nov 27 21:45 runtime_log.err
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas       660 Nov 27 21:45 j6fKDmAvsf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDma7FKDmRjdA8n.diag
[2025-11-27 21:45:56] -rw-r--r--. 1 boincer umatlas     21376 Nov 27 21:45 stderr.txt
[2025-11-27 21:45:56] HITS file was successfully produced:
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas 918297399 Nov 27 21:44 shared/HITS.pool.root.1
[2025-11-27 21:45:56]  *** Contents of shared directory: ***
[2025-11-27 21:45:56] total 1308812
[2025-11-27 21:45:56] -rw-r--r--. 2 boincer umatlas 409966225 Nov 27 00:02 ATLAS.root_0
[2025-11-27 21:45:56] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:02 start_atlas.sh
[2025-11-27 21:45:56] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 00:02 input.tar.gz
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas 918297399 Nov 27 21:44 HITS.pool.root.1
[2025-11-27 21:45:56] -rw-------. 1 boincer umatlas  11335680 Nov 27 21:45 result.tar.gz
21:45:58 (459405): run_atlas exited; CPU time 265782.922500
21:45:58 (459405): called boinc_finish(0)

</stderr_txt>
]]>

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