Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:48:26 (2032619): wrapper (7.7.26015): starting
01:48:26 (2032619): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:48:26] Arguments: --nthreads 8
[2025-11-27 01:48:26] Threads: 8
[2025-11-27 01:48:26] Checking for CVMFS
[2025-11-27 01:48:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:48:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:48:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:48:27] 2.13.3.0 12846 31103 271516 153350 1 731 30893878 32935936 44274 16776704 0 168820923 99.503 208526272 38080 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 01:48:27] CVMFS is ok
[2025-11-27 01:48:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:48:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:48:27] Further information can be found at the LHC@home message board.
[2025-11-27 01:48:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:48:27] Checking for apptainer binary...
[2025-11-27 01:48:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:48:27] Running /usr/bin/apptainer --version
[2025-11-27 01:48:27] apptainer version 1.4.4-1.el9
[2025-11-27 01:48:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:48:27] c7-16-9.aglt2.org
[2025-11-27 01:48:27] apptainer works
[2025-11-27 01:48:27] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:48:27] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:48:27] Starting ATLAS job with PandaID=6898120352
[2025-11-27 01:48:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:10:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:10:59] 2025-11-28 01:09:49,639 | INFO     | monitor loop #4016: job 0:6898120352 is in state 'finished'
[2025-11-27 20:10:59] 2025-11-28 01:09:49,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,502 | INFO     | time since job start (66052s) is within the limit (172800.0s)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,623 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:10:59] 2025-11-28 01:09:51,629 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3035.2023854166673
[2025-11-27 20:10:59] 2025-11-28 01:09:51,645 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6898120352/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,646 | INFO     | extracted standard info from prmon json
[2025-11-27 20:10:59] 2025-11-28 01:09:51,646 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:10:59] 2025-11-28 01:09:51,646 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:10:59] 2025-11-28 01:09:51,670 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:10:59] 2025-11-28 01:09:51,672 | INFO     | sum of square deviations: 392796339453.025
[2025-11-27 20:10:59] 2025-11-28 01:09:51,714 | INFO     | sum of deviations: 2229718307122.844
[2025-11-27 20:10:59] 2025-11-28 01:09:51,714 | INFO     | mean x: 1764259184.7181146
[2025-11-27 20:10:59] 2025-11-28 01:09:51,714 | INFO     | mean y: 2897060.002772643
[2025-11-27 20:10:59] 2025-11-28 01:09:51,714 | INFO     | intersect: -10011964606.359705
[2025-11-27 20:10:59] 2025-11-28 01:09:51,715 | INFO     | chi2: 9.253725455858051
[2025-11-27 20:10:59] 2025-11-28 01:09:51,716 | INFO     | sum of square deviations: 387376537483.07196
[2025-11-27 20:10:59] 2025-11-28 01:09:51,743 | INFO     | sum of deviations: 2627457230225.366
[2025-11-27 20:10:59] 2025-11-28 01:09:51,743 | INFO     | mean x: 1764259032.2237697
[2025-11-27 20:10:59] 2025-11-28 01:09:51,743 | INFO     | mean y: 2908251.915506035
[2025-11-27 20:10:59] 2025-11-28 01:09:51,743 | INFO     | intersect: -11963524150.845385
[2025-11-27 20:10:59] 2025-11-28 01:09:51,744 | INFO     | chi2: 5.589672574764556
[2025-11-27 20:10:59] 2025-11-28 01:09:51,744 | INFO     | current chi2=5.589672574764556 (change=39.59543535813432 %)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,745 | INFO     | sum of square deviations: 382006764024.0067
[2025-11-27 20:10:59] 2025-11-28 01:09:51,770 | INFO     | sum of deviations: 2799671937817.118
[2025-11-27 20:10:59] 2025-11-28 01:09:51,772 | INFO     | mean x: 1764258879.7285447
[2025-11-27 20:10:59] 2025-11-28 01:09:51,772 | INFO     | mean y: 2913131.9832089553
[2025-11-27 20:10:59] 2025-11-28 01:09:51,772 | INFO     | intersect: -12927083249.73077
[2025-11-27 20:10:59] 2025-11-28 01:09:51,773 | INFO     | chi2: 4.376244441325813
[2025-11-27 20:10:59] 2025-11-28 01:09:51,773 | INFO     | current chi2=4.376244441325813 (change=21.708393778142796 %)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,773 | INFO     | right removable region: 1071
[2025-11-27 20:10:59] 2025-11-28 01:09:51,774 | INFO     | sum of square deviations: 387375733503.0718
[2025-11-27 20:10:59] 2025-11-28 01:09:51,797 | INFO     | sum of deviations: 1830390876915.0417
[2025-11-27 20:10:59] 2025-11-28 01:09:51,797 | INFO     | mean x: 1764259337.2237697
[2025-11-27 20:10:59] 2025-11-28 01:09:51,797 | INFO     | mean y: 2908292.443825441
[2025-11-27 20:10:59] 2025-11-28 01:09:51,797 | INFO     | intersect: -8333401693.119476
[2025-11-27 20:10:59] 2025-11-28 01:09:51,798 | INFO     | chi2: 5.80586762899365
[2025-11-27 20:10:59] 2025-11-28 01:09:51,798 | INFO     | current chi2=5.80586762899365 (change=37.259132479251825 %)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,799 | INFO     | sum of square deviations: 382005549635.8197
[2025-11-27 20:10:59] 2025-11-28 01:09:51,821 | INFO     | sum of deviations: 1676078658273.763
[2025-11-27 20:10:59] 2025-11-28 01:09:51,821 | INFO     | mean x: 1764259489.7248135
[2025-11-27 20:10:59] 2025-11-28 01:09:51,821 | INFO     | mean y: 2912667.7042910447
[2025-11-27 20:10:59] 2025-11-28 01:09:51,822 | INFO     | intersect: -7737911205.676015
[2025-11-27 20:10:59] 2025-11-28 01:09:51,822 | INFO     | chi2: 5.1735999848179945
[2025-11-27 20:10:59] 2025-11-28 01:09:51,823 | INFO     | current chi2=5.1735999848179945 (change=10.890149148737112 %)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,823 | INFO     | left removable region: 20
[2025-11-27 20:10:59] 2025-11-28 01:09:51,824 | INFO     | sum of square deviations: 359993140183.12994
[2025-11-27 20:10:59] 2025-11-28 01:09:51,844 | INFO     | sum of deviations: 2130504265685.206
[2025-11-27 20:10:59] 2025-11-28 01:09:51,845 | INFO     | mean x: 1764259459.242626
[2025-11-27 20:10:59] 2025-11-28 01:09:51,845 | INFO     | mean y: 2932101.6070409133
[2025-11-27 20:10:59] 2025-11-28 01:09:51,845 | INFO     | intersect: -10438273255.19446
[2025-11-27 20:10:59] 2025-11-28 01:09:51,846 | INFO     | chi2: 0.20695470650317915
[2025-11-27 20:10:59] 2025-11-28 01:09:51,846 | INFO     | current memory leak: 5.92 B/s (using 1051 data points, chi2=0.21)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,847 | INFO     | could have reported an average CPU frequency of 3092 MHz (40 samples)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,847 | INFO     | ..............................
[2025-11-27 20:10:59] 2025-11-28 01:09:51,847 | INFO     | . Timing measurements:
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | . get job = 0 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | . initial setup = 5 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | . payload setup = 20 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | . stage-in = 0 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | . payload execution = 65973 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | . stage-out = 3 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | . log creation = 0 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,848 | INFO     | ..............................
[2025-11-27 20:10:59] 2025-11-28 01:09:51,925 | INFO     | 
[2025-11-27 20:10:59] 2025-11-28 01:09:51,925 | INFO     | job summary report
[2025-11-27 20:10:59] 2025-11-28 01:09:51,925 | INFO     | --------------------------------------------------
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | PanDA job id: 6898120352
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | task id: 47556161
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | errors: (none)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | pilot state: finished 
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | transexitcode: 0
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | exeerrorcode: 0
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | exeerrordiag: 
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | exitcode: 0
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | exitmsg: OK
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | cpuconsumptiontime: 198681 s
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | nevents: 1000
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | neventsw: 0
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | pid: 2043569
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | pgrp: 2043569
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | corecount: 8
[2025-11-27 20:10:59] 2025-11-28 01:09:51,926 | INFO     | event service: False
[2025-11-27 20:10:59] 2025-11-28 01:09:51,927 | INFO     | sizes: {0: 2284037, 1: 2284292, 12: 2284292, 14: 2284582, 23: 2284610, 65996: 2340462, 65997: 2340589, 66001: 2349639, 66004: 2349695, 66017: 2349941}
[2025-11-27 20:10:59] 2025-11-28 01:09:51,927 | INFO     | --------------------------------------------------
[2025-11-27 20:10:59] 2025-11-28 01:09:51,927 | INFO     | 
[2025-11-27 20:10:59] 2025-11-28 01:09:51,927 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 20:10:59] 2025-11-28 01:09:51,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:10:59] 2025-11-28 01:09:51,952 | INFO     | job 6898120352 has completed (purged errors)
[2025-11-27 20:10:59] 2025-11-28 01:09:51,952 | INFO     | overall cleanup function is called
[2025-11-27 20:10:59] 2025-11-28 01:09:52,982 | INFO     | --- collectZombieJob: --- 10, [2043569]
[2025-11-27 20:10:59] 2025-11-28 01:09:52,982 | INFO     | zombie collector waiting for pid 2043569
[2025-11-27 20:10:59] 2025-11-28 01:09:52,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:10:59] 2025-11-28 01:09:52,982 | INFO     | collected zombie processes
[2025-11-27 20:10:59] 2025-11-28 01:09:52,982 | INFO     | will attempt to kill all subprocesses of pid=2043569
[2025-11-27 20:10:59] 2025-11-28 01:09:54,613 | INFO     | process IDs to be killed: [2043569] (in reverse order)
[2025-11-27 20:10:59] 2025-11-28 01:09:54,835 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:10:59] 2025-11-28 01:09:54,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:10:59] 2025-11-28 01:09:54,857 | INFO     | did not find any defunct processes belonging to 2043569
[2025-11-27 20:10:59] 2025-11-28 01:09:54,884 | INFO     | did not find any defunct processes belonging to 2043569
[2025-11-27 20:10:59] 2025-11-28 01:09:54,886 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:10:59] 2025-11-28 01:09:54,886 | INFO     | ready for new job
[2025-11-27 20:10:59] 2025-11-28 01:09:54,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:10:59] 2025-11-28 01:09:54,897 | INFO     | ***************************************
[2025-11-27 20:10:59] 2025-11-28 01:09:54,897 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:10:59] 2025-11-28 01:09:54,897 | INFO     | ***************************************
[2025-11-27 20:10:59] 2025-11-28 01:09:54,897 | INFO     | 
[2025-11-27 20:10:59] 2025-11-28 01:09:54,905 | INFO     | architecture information:
[2025-11-27 20:10:59] 2025-11-28 01:09:54,908 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:10:59] 2025-11-28 01:09:54,947 | INFO     | cat /etc/os-release:
[2025-11-27 20:10:59] NAME="CentOS Linux"
[2025-11-27 20:10:59] VERSION="7 (Core)"
[2025-11-27 20:10:59] ID="centos"
[2025-11-27 20:10:59] ID_LIKE="rhel fedora"
[2025-11-27 20:10:59] VERSION_ID="7"
[2025-11-27 20:10:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:10:59] ANSI_COLOR="0;31"
[2025-11-27 20:10:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:10:59] HOME_URL="https://www.centos.org/"
[2025-11-27 20:10:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:10:59] 
[2025-11-27 20:10:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:10:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:10:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:10:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:10:59] 
[2025-11-27 20:10:59] 2025-11-28 01:09:54,948 | INFO     | ***************************************
[2025-11-27 20:10:59] 2025-11-28 01:09:55,451 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 20:10:59] 2025-11-28 01:09:55,524 | INFO     | sufficient remaining disk space (66735570944 B)
[2025-11-27 20:10:59] 2025-11-28 01:09:55,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:10:59] 2025-11-28 01:09:55,524 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:10:59] 2025-11-28 01:09:55,524 | INFO     | update_server=False
[2025-11-27 20:10:59] 2025-11-28 01:09:55,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:10:59] 2025-11-28 01:09:55,525 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:10:59] 2025-11-28 01:09:55,611 | INFO     | all payload control threads have been joined
[2025-11-27 20:10:59] 2025-11-28 01:09:55,730 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:10:59] 2025-11-28 01:09:55,730 | INFO     | aborting loop
[2025-11-27 20:10:59] 2025-11-28 01:09:56,316 | INFO     | all data control threads have been joined
[2025-11-27 20:10:59] 2025-11-28 01:09:56,512 | INFO     | all job control threads have been joined
[2025-11-27 20:10:59] 2025-11-28 01:09:56,531 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:56,585 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:56,617 | INFO     | [payload] control thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:56,617 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:56,718 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:56,736 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:56,840 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:56,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:10:59] 2025-11-28 01:09:56,991 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:10:59] 2025-11-28 01:09:57,081 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:57,323 | INFO     | [data] control thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:57,479 | INFO     | [job] validate thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:57,494 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:57,517 | INFO     | [job] control thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:57,898 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:57,988 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:58,998 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:09:59,535 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:10:59] 2025-11-28 01:10:25,549 | INFO     | PID=2036422 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:10:59] 2025-11-28 01:10:25,549 | INFO     | .. there are 53 such processes running
[2025-11-27 20:10:59] 2025-11-28 01:10:25,549 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:10:59] 2025-11-28 01:10:25,549 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:10:59] 2025-11-28 01:10:25,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:10:59] 2025-11-28 01:10:52,899 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:10:59] 2025-11-28 01:10:53,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836613191488)>', '<ExcThread(monitor, started 139835679438592)>']
[2025-11-27 20:10:59] 2025-11-28 01:10:53,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:10:59] 2025-11-28 01:10:53,741 | INFO     | [monitor] control thread has ended
[2025-11-27 20:10:59] 2025-11-28 01:10:58,575 | INFO     | all workflow threads have been joined
[2025-11-27 20:10:59] 2025-11-28 01:10:58,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:10:59] 2025-11-28 01:10:58,575 | INFO     | traces error code: 0
[2025-11-27 20:10:59] 2025-11-28 01:10:58,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:10:59] 2025-11-28 01:10:58,794 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:10:59] 2025-11-28 01:10:58,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:10:59] 2025-11-28 01:10:58,865 [wrapper] pilotpid: 2036422
[2025-11-27 20:10:59] 2025-11-28 01:10:58,889 [wrapper] Pilot exit status: 0
[2025-11-27 20:10:59] 2025-11-28 01:10:58,932 [wrapper] pandaids: 6898120352
[2025-11-27 20:10:59] 2025-11-28 01:10:59,111 [wrapper] cleanup supervisor_pilot 2601080 2036423
[2025-11-27 20:10:59] 2025-11-28 01:10:59,115 [wrapper] Test setup, not cleaning
[2025-11-27 20:10:59] 2025-11-28 01:10:59,117 [wrapper] apfmon messages muted
[2025-11-27 20:10:59] 2025-11-28 01:10:59,120 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:10:59] 2025-11-28 01:10:59,123 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:10:59]  *** Error codes and diagnostics ***
[2025-11-27 20:10:59]     "exeErrorCode": 0,
[2025-11-27 20:10:59]     "exeErrorDiag": "",
[2025-11-27 20:10:59]     "pilotErrorCode": 0,
[2025-11-27 20:10:59]     "pilotErrorDiag": "",
[2025-11-27 20:10:59]  *** Listing of results directory ***
[2025-11-27 20:10:59] total 1303280
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:26 queuedata.json
[2025-11-27 20:10:59] -rwx------. 1 boincer umatlas     36292 Nov 25 22:27 runpilot2-wrapper.sh
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas       100 Nov 27 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:10:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 01:48 run_atlas
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas       105 Nov 27 01:48 job.xml
[2025-11-27 20:10:59] -rw-r--r--. 2 boincer umatlas 407962490 Nov 27 01:48 EVNT.47483658._002424.pool.root.1
[2025-11-27 20:10:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 01:48 start_atlas.sh
[2025-11-27 20:10:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 01:48 shared
[2025-11-27 20:10:59] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 01:48 input.tar.gz
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas         0 Nov 27 01:48 boinc_lockfile
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 01:48 pandaJob.out
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas        57 Nov 27 01:48 setup.sh.local
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas    991554 Nov 27 01:48 agis_schedconf.cvmfs.json
[2025-11-27 20:10:59] drwx------. 5 boincer umatlas      4096 Nov 27 01:48 pilot3
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas       533 Nov 27 20:00 boinc_task_state.xml
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 20:01 init_data.xml
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas 901434692 Nov 27 20:08 HITS.47556161._004062.pool.root.1
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas      1082 Nov 27 20:09 memory_monitor_summary.json
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:09 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas   2206848 Nov 27 20:09 log.47556161._004062.job.log.tgz.1
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas        95 Nov 27 20:09 pilot_heartbeat.json
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas      8627 Nov 27 20:09 heartbeat.json
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:10 boinc_mmap_file
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:10 wrapper_checkpoint.txt
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas      4824 Nov 27 20:10 pilotlog.txt
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas   8409389 Nov 27 20:10 log.47556161._004062.job.log.1
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas       353 Nov 27 20:10 output.list
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:10 runtime_log
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas  10639360 Nov 27 20:10 result.tar.gz
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 20:10 runtime_log.err
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas       664 Nov 27 20:10 hhoLDmiMLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmloMKDmp3pMYm.diag
[2025-11-27 20:10:59] -rw-r--r--. 1 boincer umatlas     21370 Nov 27 20:10 stderr.txt
[2025-11-27 20:10:59] HITS file was successfully produced:
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas 901434692 Nov 27 20:08 shared/HITS.pool.root.1
[2025-11-27 20:10:59]  *** Contents of shared directory: ***
[2025-11-27 20:10:59] total 1289708
[2025-11-27 20:10:59] -rw-r--r--. 2 boincer umatlas 407962490 Nov 27 01:48 ATLAS.root_0
[2025-11-27 20:10:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 01:48 start_atlas.sh
[2025-11-27 20:10:59] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 01:48 input.tar.gz
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas 901434692 Nov 27 20:08 HITS.pool.root.1
[2025-11-27 20:10:59] -rw-------. 1 boincer umatlas  10639360 Nov 27 20:10 result.tar.gz
20:11:00 (2032619): run_atlas exited; CPU time 200612.637275
20:11:00 (2032619): called boinc_finish(0)

</stderr_txt>
]]>

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