Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:00:28 (3036207): wrapper (7.7.26015): starting
18:00:28 (3036207): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:00:28] Arguments: --nthreads 8
[2025-11-26 18:00:28] Threads: 8
[2025-11-26 18:00:28] Checking for CVMFS
[2025-11-26 18:00:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:00:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:00:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:00:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:00:29] 2.11.3.0 52815 29196 194988 153342 2 133 42894367 45568000 23076 130560 0 175461155 99.808 97438844 24957 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 18:00:29] CVMFS is ok
[2025-11-26 18:00:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:00:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:00:29] Further information can be found at the LHC@home message board.
[2025-11-26 18:00:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:00:29] Checking for apptainer binary...
[2025-11-26 18:00:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:00:29] Running /usr/bin/apptainer --version
[2025-11-26 18:00:29] apptainer version 1.4.1-1.el9
[2025-11-26 18:00:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:00:29] wns0013.triumf.lcg
[2025-11-26 18:00:29] apptainer works
[2025-11-26 18:00:29] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:00:29] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:00:29] Starting ATLAS job with PandaID=6898686341
[2025-11-26 18:00:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:08:22]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . Timing measurements:
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . get job = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . initial setup = 4 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . payload setup = 28 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . stage-in = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . payload execution = 145 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . stage-out = 1 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | . log creation = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | ..............................
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898686341/pilotlog.txt
[2025-11-26 18:08:22] 2025-11-27 02:07:24,432 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 18:08:22] - Log from pilotlog.txt -
[2025-11-26 18:08:22] 2025-11-27 02:07:24,244 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898686341/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:08:22] 2025-11-27 02:07:24,245 | INFO     | extracted standard info from prmon json
[2025-11-26 18:08:22] 2025-11-27 02:07:24,245 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:08:22] 2025-11-27 02:07:24,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:08:22] 2025-11-27 02:07:24,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 18:08:22] 2025-11-27 02:07:24,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 18:08:22] 2025-11-27 02:07:24,246 | WARNING  | wrong length of table data, x=[1764208974.0, 1764209035.0, 1764209096.0], y=[1296.0, 720395.0, 253408.0] (must be same and length>=4)
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | ..............................
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . Timing measurements:
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . get job = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . initial setup = 4 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . payload setup = 28 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . stage-in = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . payload execution = 145 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . stage-out = 1 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | . log creation = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | ..............................
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898686341/pilotlog.txt
[2025-11-26 18:08:22] 2025-11-27 02:07:24,433 | WARNING  | 
[2025-11-26 18:08:22] [begin log extracts]
[2025-11-26 18:08:22] - Log from pilotlog.txt -
[2025-11-26 18:08:22] 2025-11-27 02:07:24,244 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898686341/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:08:22] 2025-11-27 02:07:24,245 | INFO     | extracted standard info from prmon json
[2025-11-26 18:08:22] 2025-11-27 02:07:24,245 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:08:22] 2025-11-27 02:07:24,245 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:08:22] 2025-11-27 02:07:24,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 18:08:22] 2025-11-27 02:07:24,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 18:08:22] 2025-11-27 02:07:24,246 | WARNING  | wrong length of table data, x=[1764208974.0, 1764209035.0, 1764209096.0], y=[1296.0, 720395.0, 253408.0] (must be same and length>=4)
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | ..............................
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . Timing measurements:
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . get job = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . initial setup = 4 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . payload setup = 28 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . stage-in = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . payload execution = 145 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,247 | INFO     | . stage-out = 1 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | . log creation = 0 s
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | ..............................
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:08:22] 2025-11-27 02:07:24,248 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898686341/pilotlog.txt
[2025-11-26 18:08:22] [end log extracts]
[2025-11-26 18:08:22] 2025-11-27 02:07:24,433 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 18:08:22] 2025-11-27 02:07:24,433 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 18:08:22] 2025-11-27 02:07:25,019 | INFO     | 
[2025-11-26 18:08:22] 2025-11-27 02:07:25,020 | INFO     | job summary report
[2025-11-26 18:08:22] 2025-11-27 02:07:25,020 | INFO     | --------------------------------------------------
[2025-11-26 18:08:22] 2025-11-27 02:07:25,020 | INFO     | PanDA job id: 6898686341
[2025-11-26 18:08:22] 2025-11-27 02:07:25,020 | INFO     | task id: 47556185
[2025-11-26 18:08:22] 2025-11-27 02:07:25,020 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 18:04:57,035 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | pilot state: failed 
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | transexitcode: 65
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | exeerrorcode: 65
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | exitcode: 65
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | cpuconsumptiontime: 48 s
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | nevents: 0
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | neventsw: 0
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | pid: 3046874
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | pgrp: 3046874
[2025-11-26 18:08:22] 2025-11-27 02:07:25,021 | INFO     | corecount: 8
[2025-11-26 18:08:22] 2025-11-27 02:07:25,022 | INFO     | event service: False
[2025-11-26 18:08:22] 2025-11-27 02:07:25,022 | INFO     | sizes: {0: 2284084, 1: 2284339, 12: 2284339, 23: 2284657, 177: 2307729, 180: 2312175, 321: 2312313}
[2025-11-26 18:08:22] 2025-11-27 02:07:25,022 | INFO     | --------------------------------------------------
[2025-11-26 18:08:22] 2025-11-27 02:07:25,022 | INFO     | 
[2025-11-26 18:08:22] 2025-11-27 02:07:25,069 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 18:08:22] 2025-11-27 02:07:25,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | job 6898686341 has completed (purged errors)
[2025-11-26 18:08:22] 2025-11-27 02:07:25,216 | INFO     | overall cleanup function is called
[2025-11-26 18:08:22] 2025-11-27 02:07:25,226 | INFO     | PID=3039999 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:08:22] 2025-11-27 02:07:25,227 | INFO     | .. there are 26 such processes running
[2025-11-26 18:08:22] 2025-11-27 02:07:26,225 | INFO     | --- collectZombieJob: --- 10, [3046874]
[2025-11-26 18:08:22] 2025-11-27 02:07:26,226 | INFO     | zombie collector waiting for pid 3046874
[2025-11-26 18:08:22] 2025-11-27 02:07:26,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:08:22] 2025-11-27 02:07:26,226 | INFO     | collected zombie processes
[2025-11-26 18:08:22] 2025-11-27 02:07:26,226 | INFO     | will attempt to kill all subprocesses of pid=3046874
[2025-11-26 18:08:22] 2025-11-27 02:07:27,461 | INFO     | process IDs to be killed: [3046874] (in reverse order)
[2025-11-26 18:08:22] 2025-11-27 02:07:27,650 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:08:22] 2025-11-27 02:07:27,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:08:22] 2025-11-27 02:07:27,658 | INFO     | did not find any defunct processes belonging to 3046874
[2025-11-26 18:08:22] 2025-11-27 02:07:27,665 | INFO     | did not find any defunct processes belonging to 3046874
[2025-11-26 18:08:22] 2025-11-27 02:07:27,666 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:08:22] 2025-11-27 02:07:27,666 | INFO     | ready for new job
[2025-11-26 18:08:22] 2025-11-27 02:07:27,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:08:22] 2025-11-27 02:07:27,668 | INFO     | ***************************************
[2025-11-26 18:08:22] 2025-11-27 02:07:27,668 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:08:22] 2025-11-27 02:07:27,668 | INFO     | ***************************************
[2025-11-26 18:08:22] 2025-11-27 02:07:27,668 | INFO     | 
[2025-11-26 18:08:22] 2025-11-27 02:07:27,670 | INFO     | architecture information:
[2025-11-26 18:08:22] 2025-11-27 02:07:27,700 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:08:22] 2025-11-27 02:07:27,764 | INFO     | cat /etc/os-release:
[2025-11-26 18:08:22] NAME="CentOS Linux"
[2025-11-26 18:08:22] VERSION="7 (Core)"
[2025-11-26 18:08:22] ID="centos"
[2025-11-26 18:08:22] ID_LIKE="rhel fedora"
[2025-11-26 18:08:22] VERSION_ID="7"
[2025-11-26 18:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:08:22] ANSI_COLOR="0;31"
[2025-11-26 18:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:08:22] HOME_URL="https://www.centos.org/"
[2025-11-26 18:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:08:22] 
[2025-11-26 18:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:08:22] 
[2025-11-26 18:08:22] 2025-11-27 02:07:27,764 | INFO     | ***************************************
[2025-11-26 18:08:22] 2025-11-27 02:07:28,268 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 18:08:22] 2025-11-27 02:07:28,378 | INFO     | sufficient remaining disk space (1120989609984 B)
[2025-11-26 18:08:22] 2025-11-27 02:07:28,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:08:22] 2025-11-27 02:07:28,379 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:08:22] 2025-11-27 02:07:28,379 | INFO     | update_server=False
[2025-11-26 18:08:22] 2025-11-27 02:07:28,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:08:22] 2025-11-27 02:07:28,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:08:22] 2025-11-27 02:07:28,530 | INFO     | all data control threads have been joined
[2025-11-26 18:08:22] 2025-11-27 02:07:28,667 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 18:08:22] 2025-11-27 02:07:28,667 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 18:08:22] 2025-11-27 02:07:28,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:08:22] 2025-11-27 02:07:28,667 | INFO     | will abort loop
[2025-11-26 18:08:22] 2025-11-27 02:07:29,042 | INFO     | all payload control threads have been joined
[2025-11-26 18:08:22] 2025-11-27 02:07:29,385 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:29,536 | INFO     | [data] control thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:29,564 | INFO     | all job control threads have been joined
[2025-11-26 18:08:22] 2025-11-27 02:07:29,599 | INFO     | [job] validate thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:29,673 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:29,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:29,693 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:29,806 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:30,048 | INFO     | [payload] control thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:30,088 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:30,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:08:22] 2025-11-27 02:07:30,344 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:30,389 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:30,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:08:22] 2025-11-27 02:07:30,574 | INFO     | [job] control thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:30,690 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:30,948 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:31,171 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:34,408 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:08:22] 2025-11-27 02:07:58,453 | INFO     | PID=3039999 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:08:22] 2025-11-27 02:07:58,453 | INFO     | .. there are 26 such processes running
[2025-11-26 18:08:22] 2025-11-27 02:07:58,453 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:08:22] 2025-11-27 02:07:58,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:08:22] 2025-11-27 02:07:58,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:08:22] 2025-11-27 02:08:15,361 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:08:22] 2025-11-27 02:08:16,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212898395968)>', '<ExcThread(monitor, started 140211623294720)>']
[2025-11-26 18:08:22] 2025-11-27 02:08:16,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:08:22] 2025-11-27 02:08:16,592 | INFO     | [monitor] control thread has ended
[2025-11-26 18:08:22] 2025-11-27 02:08:21,318 | INFO     | all workflow threads have been joined
[2025-11-26 18:08:22] 2025-11-27 02:08:21,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:08:22] 2025-11-27 02:08:21,318 | INFO     | traces error code: 0
[2025-11-26 18:08:22] 2025-11-27 02:08:21,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:08:22] 2025-11-27 02:08:21,555 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:08:22] 2025-11-27 02:08:21,557 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:08:22] 2025-11-27 02:08:21,571 [wrapper] pilotpid: 3039999
[2025-11-26 18:08:22] 2025-11-27 02:08:21,584 [wrapper] Pilot exit status: 0
[2025-11-26 18:08:22] 2025-11-27 02:08:21,750 [wrapper] pandaids: 6898686341
[2025-11-26 18:08:22] 2025-11-27 02:08:21,849 [wrapper] cleanup supervisor_pilot 3040005 3040000
[2025-11-26 18:08:22] 2025-11-27 02:08:21,852 [wrapper] Test setup, not cleaning
[2025-11-26 18:08:22] 2025-11-27 02:08:21,854 [wrapper] apfmon messages muted
[2025-11-26 18:08:22] 2025-11-27 02:08:21,856 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:08:22] 2025-11-27 02:08:21,857 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:08:22]  *** Error codes and diagnostics ***
[2025-11-26 18:08:22]     "exeErrorCode": 65,
[2025-11-26 18:08:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 18:08:22]     "pilotErrorCode": 1305,
[2025-11-26 18:08:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 18:08:22]  *** Listing of results directory ***
[2025-11-26 18:08:22] total 404300
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc    576529 Nov 26 08:12 pilot3.tar.gz
[2025-11-26 18:08:22] -rwx------. 1 boinc boinc     36292 Nov 26 08:36 runpilot2-wrapper.sh
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc      5112 Nov 26 08:37 queuedata.json
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc       100 Nov 26 18:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:08:22] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 18:00 run_atlas
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc       105 Nov 26 18:00 job.xml
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc      6445 Nov 26 18:00 init_data.xml
[2025-11-26 18:08:22] -rw-r--r--. 2 boinc boinc 409763373 Nov 26 18:00 EVNT.47483658._004293.pool.root.1
[2025-11-26 18:08:22] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:00 start_atlas.sh
[2025-11-26 18:08:22] drwxrwx--x. 2 boinc boinc      4096 Nov 26 18:00 shared
[2025-11-26 18:08:22] -rw-r--r--. 2 boinc boinc    590109 Nov 26 18:00 input.tar.gz
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc         0 Nov 26 18:00 boinc_lockfile
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc      2786 Nov 26 18:00 pandaJob.out
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc    991530 Nov 26 18:01 agis_schedconf.cvmfs.json
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc   1516240 Nov 26 18:01 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:08:22] drwx------. 5 boinc boinc      4096 Nov 26 18:01 pilot3
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc       524 Nov 26 18:04 boinc_task_state.xml
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc       993 Nov 26 18:04 memory_monitor_summary.json
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc     49253 Nov 26 18:05 log.47556185._000569.job.log.tgz.1
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc        95 Nov 26 18:07 pilot_heartbeat.json
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc      9673 Nov 26 18:07 heartbeat.json
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc        23 Nov 26 18:08 wrapper_checkpoint.txt
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc      8192 Nov 26 18:08 boinc_mmap_file
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc      5009 Nov 26 18:08 pilotlog.txt
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc    111965 Nov 26 18:08 log.47556185._000569.job.log.1
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc       186 Nov 26 18:08 output.list
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc       620 Nov 26 18:08 runtime_log
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc    184320 Nov 26 18:08 result.tar.gz
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc      8634 Nov 26 18:08 runtime_log.err
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc       645 Nov 26 18:08 PL8MDmXgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm48JKDm8HgVQn.diag
[2025-11-26 18:08:22] -rw-r--r--. 1 boinc boinc     22576 Nov 26 18:08 stderr.txt
[2025-11-26 18:08:22] No HITS result produced
[2025-11-26 18:08:22]  *** Contents of shared directory: ***
[2025-11-26 18:08:22] total 400940
[2025-11-26 18:08:22] -rw-r--r--. 2 boinc boinc 409763373 Nov 26 18:00 ATLAS.root_0
[2025-11-26 18:08:22] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:00 start_atlas.sh
[2025-11-26 18:08:22] -rw-r--r--. 2 boinc boinc    590109 Nov 26 18:00 input.tar.gz
[2025-11-26 18:08:22] -rw-------. 1 boinc boinc    184320 Nov 26 18:08 result.tar.gz
18:08:23 (3036207): run_atlas exited; CPU time 55.984764
18:08:23 (3036207): called boinc_finish(0)

</stderr_txt>
]]>

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