Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:41 (2421470): wrapper (7.7.26015): starting
00:04:41 (2421470): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:04:41] Arguments: --nthreads 9
[2025-11-27 00:04:41] Threads: 9
[2025-11-27 00:04:41] Checking for CVMFS
[2025-11-27 00:04:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:04:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:04:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:04:44] 2.13.3.0 11160 31046 350320 153347 1 522 24398379 32935937 33295 16776704 0 115065339 99.391 179356783 41007 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:04:44] CVMFS is ok
[2025-11-27 00:04:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:04:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:04:44] Further information can be found at the LHC@home message board.
[2025-11-27 00:04:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:04:44] Checking for apptainer binary...
[2025-11-27 00:04:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:04:44] Running /usr/bin/apptainer --version
[2025-11-27 00:04:44] apptainer version 1.4.4-1.el9
[2025-11-27 00:04:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:04:44] c6-2-29-2.aglt2.org
[2025-11-27 00:04:44] apptainer works
[2025-11-27 00:04:44] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:04:44] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:04:44] Starting ATLAS job with PandaID=6898412853
[2025-11-27 00:04:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 05:22:18]  *** The last 200 lines of the pilot log: ***
[2025-11-28 05:22:18] 2025-11-28 10:21:05,263 | INFO     | monitor loop #6422: job 0:6898412853 is in state 'finished'
[2025-11-28 05:22:18] 2025-11-28 10:21:05,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:22:18] 2025-11-28 10:21:05,361 | INFO     | time since job start (105301s) is within the limit (172800.0s)
[2025-11-28 05:22:18] 2025-11-28 10:21:07,368 | INFO     | time since job start (105303s) is within the limit (172800.0s)
[2025-11-28 05:22:18] 2025-11-28 10:21:07,769 | INFO     | monitor loop #6423: job 0:6898412853 is in state 'finished'
[2025-11-28 05:22:18] 2025-11-28 10:21:07,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:22:18] 2025-11-28 10:21:09,375 | INFO     | time since job start (105305s) is within the limit (172800.0s)
[2025-11-28 05:22:18] 2025-11-28 10:21:10,301 | INFO     | monitor loop #6424: job 0:6898412853 is in state 'finished'
[2025-11-28 05:22:18] 2025-11-28 10:21:10,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:22:18] 2025-11-28 10:21:10,529 [wrapper] supervise_pilot (15 min periods counter: 118)
[2025-11-28 05:22:18] 2025-11-28 10:21:11,395 | INFO     | time since job start (105307s) is within the limit (172800.0s)
[2025-11-28 05:22:18] 2025-11-28 10:21:12,852 | INFO     | monitor loop #6425: job 0:6898412853 is in state 'finished'
[2025-11-28 05:22:18] 2025-11-28 10:21:12,852 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:22:18] 2025-11-28 10:21:13,403 | INFO     | time since job start (105309s) is within the limit (172800.0s)
[2025-11-28 05:22:18] 2025-11-28 10:21:14,789 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 05:22:18] 2025-11-28 10:21:14,876 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3164.8233392857146
[2025-11-28 05:22:18] 2025-11-28 10:21:14,888 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898412853/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 05:22:18] 2025-11-28 10:21:14,893 | INFO     | extracted standard info from prmon json
[2025-11-28 05:22:18] 2025-11-28 10:21:14,893 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 05:22:18] 2025-11-28 10:21:14,893 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 05:22:18] 2025-11-28 10:21:14,936 | INFO     | fitting pss+swap vs Time
[2025-11-28 05:22:18] 2025-11-28 10:21:14,942 | INFO     | sum of square deviations: 1586092927144.7876
[2025-11-28 05:22:18] 2025-11-28 10:21:15,089 | INFO     | sum of deviations: 6946164636147.642
[2025-11-28 05:22:18] 2025-11-28 10:21:15,089 | INFO     | mean x: 1764272658.627394
[2025-11-28 05:22:18] 2025-11-28 10:21:15,090 | INFO     | mean y: 3056841.482298317
[2025-11-28 05:22:18] 2025-11-28 10:21:15,090 | INFO     | intersect: -7723431398.989557
[2025-11-28 05:22:18] 2025-11-28 10:21:15,092 | INFO     | chi2: 24.982654751787265
[2025-11-28 05:22:18] 2025-11-28 10:21:15,137 | INFO     | sum of square deviations: 1572325514899.0085
[2025-11-28 05:22:18] 2025-11-28 10:21:15,504 | INFO     | time since job start (105311s) is within the limit (172800.0s)
[2025-11-28 05:22:18] 2025-11-28 10:21:15,515 | INFO     | monitor loop #6426: job 0:6898412853 is in state 'finished'
[2025-11-28 05:22:18] 2025-11-28 10:21:15,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 05:22:18] 2025-11-28 10:21:15,548 | INFO     | sum of deviations: 7616134252184.29
[2025-11-28 05:22:18] 2025-11-28 10:21:15,548 | INFO     | mean x: 1764272506.1321304
[2025-11-28 05:22:18] 2025-11-28 10:21:15,548 | INFO     | mean y: 3064261.3335273573
[2025-11-28 05:22:18] 2025-11-28 10:21:15,548 | INFO     | intersect: -8542835513.754076
[2025-11-28 05:22:18] 2025-11-28 10:21:15,628 | INFO     | chi2: 21.184331029136995
[2025-11-28 05:22:18] 2025-11-28 10:21:15,697 | INFO     | current chi2=21.184331029136995 (change=15.203843468150785 %)
[2025-11-28 05:22:18] 2025-11-28 10:21:15,697 | INFO     | right removable region: 1717
[2025-11-28 05:22:18] 2025-11-28 10:21:15,699 | INFO     | sum of square deviations: 1572323804459.0056
[2025-11-28 05:22:18] 2025-11-28 10:21:15,842 | INFO     | sum of deviations: 6202087969301.552
[2025-11-28 05:22:18] 2025-11-28 10:21:15,842 | INFO     | mean x: 1764272811.1321304
[2025-11-28 05:22:18] 2025-11-28 10:21:15,842 | INFO     | mean y: 3065081.812572759
[2025-11-28 05:22:18] 2025-11-28 10:21:15,843 | INFO     | intersect: -6956172668.997493
[2025-11-28 05:22:18] 2025-11-28 10:21:15,845 | INFO     | chi2: 20.717251296839386
[2025-11-28 05:22:18] 2025-11-28 10:21:15,845 | INFO     | current chi2=20.717251296839386 (change=17.07345955554516 %)
[2025-11-28 05:22:18] 2025-11-28 10:21:15,845 | INFO     | left removable region: 10
[2025-11-28 05:22:18] 2025-11-28 10:21:15,847 | INFO     | sum of square deviations: 1542314737462.0127
[2025-11-28 05:22:18] 2025-11-28 10:21:16,031 | INFO     | sum of deviations: 6316476611324.031
[2025-11-28 05:22:18] 2025-11-28 10:21:16,032 | INFO     | mean x: 1764272780.642648
[2025-11-28 05:22:18] 2025-11-28 10:21:16,032 | INFO     | mean y: 3081330.073813708
[2025-11-28 05:22:18] 2025-11-28 10:21:16,032 | INFO     | intersect: -7222413884.517156
[2025-11-28 05:22:18] 2025-11-28 10:21:16,034 | INFO     | chi2: 12.96014265911796
[2025-11-28 05:22:18] 2025-11-28 10:21:16,034 | INFO     | current memory leak: 4.10 B/s (using 1707 data points, chi2=12.96)
[2025-11-28 05:22:18] 2025-11-28 10:21:16,077 | INFO     | could have reported an average CPU frequency of 3119 MHz (61 samples)
[2025-11-28 05:22:18] 2025-11-28 10:21:16,077 | INFO     | ..............................
[2025-11-28 05:22:18] 2025-11-28 10:21:16,077 | INFO     | . Timing measurements:
[2025-11-28 05:22:18] 2025-11-28 10:21:16,077 | INFO     | . get job = 0 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,077 | INFO     | . initial setup = 7 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,078 | INFO     | . payload setup = 57 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,078 | INFO     | . stage-in = 0 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,078 | INFO     | . payload execution = 105111 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,078 | INFO     | . stage-out = 16 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,078 | INFO     | . log creation = 5 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,078 | INFO     | ..............................
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | 
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | job summary report
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | --------------------------------------------------
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | PanDA job id: 6898412853
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | task id: 47556173
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | errors: (none)
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | pilot state: finished 
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | transexitcode: 0
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | exeerrorcode: 0
[2025-11-28 05:22:18] 2025-11-28 10:21:16,532 | INFO     | exeerrordiag: 
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | exitcode: 0
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | exitmsg: OK
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | cpuconsumptiontime: 232069 s
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | nevents: 1000
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | neventsw: 0
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | pid: 2466734
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | pgrp: 2466734
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | corecount: 9
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | event service: False
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | sizes: {0: 2284145, 1: 2284344, 2: 2284344, 12: 2284372, 23: 2284400, 34: 2284428, 38: 2284846, 45: 2284874, 105174: 2359085, 105175: 2359084, 105193: 2368498, 105
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | --------------------------------------------------
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | 
[2025-11-28 05:22:18] 2025-11-28 10:21:16,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-28 05:22:18] 2025-11-28 10:21:16,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 05:22:18] 2025-11-28 10:21:16,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 05:22:18] 2025-11-28 10:21:16,683 | INFO     | job 6898412853 has completed (purged errors)
[2025-11-28 05:22:18] 2025-11-28 10:21:16,683 | INFO     | overall cleanup function is called
[2025-11-28 05:22:18] 2025-11-28 10:21:17,737 | INFO     | --- collectZombieJob: --- 10, [2466734]
[2025-11-28 05:22:18] 2025-11-28 10:21:17,737 | INFO     | zombie collector waiting for pid 2466734
[2025-11-28 05:22:18] 2025-11-28 10:21:17,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 05:22:18] 2025-11-28 10:21:17,737 | INFO     | collected zombie processes
[2025-11-28 05:22:18] 2025-11-28 10:21:17,737 | INFO     | will attempt to kill all subprocesses of pid=2466734
[2025-11-28 05:22:18] 2025-11-28 10:21:21,385 | INFO     | process IDs to be killed: [2466734] (in reverse order)
[2025-11-28 05:22:18] 2025-11-28 10:21:22,628 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 05:22:18] 2025-11-28 10:21:22,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 05:22:18] 2025-11-28 10:21:22,826 | INFO     | did not find any defunct processes belonging to 2466734
[2025-11-28 05:22:18] 2025-11-28 10:21:23,090 | INFO     | did not find any defunct processes belonging to 2466734
[2025-11-28 05:22:18] 2025-11-28 10:21:23,112 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 05:22:18] 2025-11-28 10:21:23,113 | INFO     | ready for new job
[2025-11-28 05:22:18] 2025-11-28 10:21:23,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 05:22:18] 2025-11-28 10:21:23,141 | INFO     | ***************************************
[2025-11-28 05:22:18] 2025-11-28 10:21:23,141 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 05:22:18] 2025-11-28 10:21:23,141 | INFO     | ***************************************
[2025-11-28 05:22:18] 2025-11-28 10:21:23,141 | INFO     | 
[2025-11-28 05:22:18] 2025-11-28 10:21:23,144 | INFO     | architecture information:
[2025-11-28 05:22:18] 2025-11-28 10:21:23,149 | INFO     | executing command: cat /etc/os-release
[2025-11-28 05:22:18] 2025-11-28 10:21:23,238 | INFO     | cat /etc/os-release:
[2025-11-28 05:22:18] NAME="CentOS Linux"
[2025-11-28 05:22:18] VERSION="7 (Core)"
[2025-11-28 05:22:18] ID="centos"
[2025-11-28 05:22:18] ID_LIKE="rhel fedora"
[2025-11-28 05:22:18] VERSION_ID="7"
[2025-11-28 05:22:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 05:22:18] ANSI_COLOR="0;31"
[2025-11-28 05:22:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 05:22:18] HOME_URL="https://www.centos.org/"
[2025-11-28 05:22:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 05:22:18] 
[2025-11-28 05:22:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 05:22:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 05:22:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 05:22:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 05:22:18] 
[2025-11-28 05:22:18] 2025-11-28 10:21:23,238 | INFO     | ***************************************
[2025-11-28 05:22:18] 2025-11-28 10:21:23,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-28 05:22:18] 2025-11-28 10:21:23,888 | INFO     | sufficient remaining disk space (72197603328 B)
[2025-11-28 05:22:18] 2025-11-28 10:21:23,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 05:22:18] 2025-11-28 10:21:23,889 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 05:22:18] 2025-11-28 10:21:23,889 | INFO     | update_server=False
[2025-11-28 05:22:18] 2025-11-28 10:21:23,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 05:22:18] 2025-11-28 10:21:23,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 05:22:18] 2025-11-28 10:21:24,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:22:18] 2025-11-28 10:21:24,197 | INFO     | aborting loop
[2025-11-28 05:22:18] 2025-11-28 10:21:24,415 | INFO     | all data control threads have been joined
[2025-11-28 05:22:18] 2025-11-28 10:21:24,572 | INFO     | all job control threads have been joined
[2025-11-28 05:22:18] 2025-11-28 10:21:24,895 | INFO     | [job] retrieve thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:24,936 | INFO     | all payload control threads have been joined
[2025-11-28 05:22:18] 2025-11-28 10:21:25,234 | INFO     | [job] job monitor thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,361 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,362 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,423 | INFO     | [data] control thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,538 | INFO     | [payload] validate_post thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,578 | INFO     | [job] control thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,605 | INFO     | [payload] failed_post thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 05:22:18] 2025-11-28 10:21:25,691 | INFO     | [data] copytool_in thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,896 | INFO     | [data] copytool_out thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:25,946 | INFO     | [payload] control thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:26,117 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:26,402 | INFO     | [job] validate thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:26,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 05:22:18] 2025-11-28 10:21:26,638 | INFO     | [job] queue monitor thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:30,646 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 05:22:18] 2025-11-28 10:21:50,935 | INFO     | PID=2434309 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 05:22:18] 2025-11-28 10:21:50,937 | INFO     | .. there are 51 such processes running
[2025-11-28 05:22:18] 2025-11-28 10:21:50,937 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 05:22:18] 2025-11-28 10:21:50,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 05:22:18] 2025-11-28 10:21:50,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 05:22:18] 2025-11-28 10:22:11,543 | INFO     | [monitor] cgroup control has ended
[2025-11-28 05:22:18] 2025-11-28 10:22:11,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040898578240)>', '<ExcThread(monitor, started 140040395011840)>']
[2025-11-28 05:22:18] 2025-11-28 10:22:12,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 05:22:18] 2025-11-28 10:22:12,086 | INFO     | [monitor] control thread has ended
[2025-11-28 05:22:18] 2025-11-28 10:22:17,024 | INFO     | all workflow threads have been joined
[2025-11-28 05:22:18] 2025-11-28 10:22:17,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 05:22:18] 2025-11-28 10:22:17,024 | INFO     | traces error code: 0
[2025-11-28 05:22:18] 2025-11-28 10:22:17,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 05:22:18] 2025-11-28 10:22:17,919 [wrapper] ==== pilot stdout END ====
[2025-11-28 05:22:18] 2025-11-28 10:22:17,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 05:22:18] 2025-11-28 10:22:17,952 [wrapper] pilotpid: 2434309
[2025-11-28 05:22:18] 2025-11-28 10:22:17,972 [wrapper] Pilot exit status: 0
[2025-11-28 05:22:18] 2025-11-28 10:22:18,115 [wrapper] pandaids: 6898412853
[2025-11-28 05:22:18] 2025-11-28 10:22:18,278 [wrapper] cleanup supervisor_pilot  550896 2434310
[2025-11-28 05:22:18] 2025-11-28 10:22:18,286 [wrapper] Test setup, not cleaning
[2025-11-28 05:22:18] 2025-11-28 10:22:18,289 [wrapper] apfmon messages muted
[2025-11-28 05:22:18] 2025-11-28 10:22:18,291 [wrapper] ==== wrapper stdout END ====
[2025-11-28 05:22:18] 2025-11-28 10:22:18,297 [wrapper] ==== wrapper stderr END ====
[2025-11-28 05:22:18]  *** Error codes and diagnostics ***
[2025-11-28 05:22:18]     "exeErrorCode": 0,
[2025-11-28 05:22:18]     "exeErrorDiag": "",
[2025-11-28 05:22:18]     "pilotErrorCode": 0,
[2025-11-28 05:22:18]     "pilotErrorDiag": "",
[2025-11-28 05:22:18]  *** Listing of results directory ***
[2025-11-28 05:22:18] total 1333892
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 05:22:18] -rwx------. 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:37 queuedata.json
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 05:22:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:04 run_atlas
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:04 job.xml
[2025-11-28 05:22:18] -rw-r--r--. 2 boincer umatlas 409510761 Nov 27 00:04 EVNT.47483658._003212.pool.root.1
[2025-11-28 05:22:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:04 shared
[2025-11-28 05:22:18] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 00:04 input.tar.gz
[2025-11-28 05:22:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:04 boinc_lockfile
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas      2787 Nov 27 00:04 pandaJob.out
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas        57 Nov 27 00:04 setup.sh.local
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-28 05:22:18] drwx------. 5 boincer umatlas      4096 Nov 27 00:06 pilot3
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas       533 Nov 28 04:40 boinc_task_state.xml
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas 919868554 Nov 28 05:18 HITS.47556173._001686.pool.root.1
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas      1059 Nov 28 05:20 memory_monitor_summary.json
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas   1516240 Nov 28 05:20 agis_ddmendpoints.agis.ALL.json
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas   2809654 Nov 28 05:20 log.47556173._001686.job.log.tgz.1
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas        95 Nov 28 05:21 pilot_heartbeat.json
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas      8627 Nov 28 05:21 heartbeat.json
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas      6844 Nov 28 05:21 init_data.xml
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas      4824 Nov 28 05:22 pilotlog.txt
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 05:22 boinc_mmap_file
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas        29 Nov 28 05:22 wrapper_checkpoint.txt
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas  13490414 Nov 28 05:22 log.47556173._001686.job.log.1
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas       353 Nov 28 05:22 output.list
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas       620 Nov 28 05:22 runtime_log
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas  16322560 Nov 28 05:22 result.tar.gz
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas      9349 Nov 28 05:22 runtime_log.err
[2025-11-28 05:22:18] -rw-------. 1 boincer umatlas       663 Nov 28 05:22 CWSLDmNgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmU8JKDm4H2lLn.diag
[2025-11-28 05:22:18] -rw-r--r--. 1 boincer umatlas     21808 Nov 28 05:22 stderr.txt
[2025-11-28 05:22:19] HITS file was successfully produced:
[2025-11-28 05:22:19] -rw-------. 1 boincer umatlas 919868554 Nov 28 05:18 shared/HITS.pool.root.1
[2025-11-28 05:22:19]  *** Contents of shared directory: ***
[2025-11-28 05:22:19] total 1314772
[2025-11-28 05:22:19] -rw-r--r--. 2 boincer umatlas 409510761 Nov 27 00:04 ATLAS.root_0
[2025-11-28 05:22:19] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 00:04 input.tar.gz
[2025-11-28 05:22:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-28 05:22:19] -rw-------. 1 boincer umatlas 919868554 Nov 28 05:18 HITS.pool.root.1
[2025-11-28 05:22:19] -rw-------. 1 boincer umatlas  16322560 Nov 28 05:22 result.tar.gz
05:22:20 (2421470): run_atlas exited; CPU time 235295.846341
05:22:20 (2421470): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN