Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:19:49 (747659): wrapper (7.7.26015): starting
18:19:49 (747659): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 18:19:49] Arguments: --nthreads 12
[2025-11-26 18:19:49] Threads: 12
[2025-11-26 18:19:49] Checking for CVMFS
[2025-11-26 18:19:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:19:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:19:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:19:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:19:51] 2.11.5.0 2718463 28923 206764 153343 2 61 43375803 45568000 22406 130560 0 187391937 99.787 124339027 19842 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 18:19:51] CVMFS is ok
[2025-11-26 18:19:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:19:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:19:51] Further information can be found at the LHC@home message board.
[2025-11-26 18:19:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:19:51] Checking for apptainer binary...
[2025-11-26 18:19:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:19:51] Running /usr/bin/apptainer --version
[2025-11-26 18:19:51] apptainer version 1.4.1-1.el9
[2025-11-26 18:19:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:19:51] wns0043.triumf.lcg
[2025-11-26 18:19:51] apptainer works
[2025-11-26 18:19:51] Set ATHENA_PROC_NUMBER=12
[2025-11-26 18:19:51] Set ATHENA_CORE_NUMBER=12
[2025-11-26 18:19:51] Starting ATLAS job with PandaID=6898687915
[2025-11-26 18:19:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:30:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | could have reported an average CPU frequency of 1310 MHz (4 samples)
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | ..............................
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | . Timing measurements:
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . get job = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . initial setup = 3 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . payload setup = 37 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . stage-in = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . payload execution = 341 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . stage-out = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . log creation = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | ..............................
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:30:59] 2025-11-27 02:30:23,072 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898687915/pilotlog.txt
[2025-11-26 18:30:59] 2025-11-27 02:30:23,157 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 18:30:59] - Log from pilotlog.txt -
[2025-11-26 18:30:59] 2025-11-27 02:30:23,057 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:30:59] 2025-11-27 02:30:23,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:30:59] 2025-11-27 02:30:23,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 18:30:59] 2025-11-27 02:30:23,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 18:30:59] 2025-11-27 02:30:23,059 | WARNING  | wrong length of table data, x=[1764210177.0, 1764210238.0, 1764210299.0, 1764210360.0, 1764210421.0], y=[1382.0, 296853.0, 644227.0, 390347.0, 549984.0] (must be s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,069 | INFO     | monitor loop #109: job 0:6898687915 is in state 'failed'
[2025-11-26 18:30:59] 2025-11-27 02:30:23,069 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | could have reported an average CPU frequency of 1310 MHz (4 samples)
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | ..............................
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | . Timing measurements:
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . get job = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . initial setup = 3 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . payload setup = 37 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . stage-in = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . payload execution = 341 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . stage-out = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . log creation = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | ..............................
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:30:59] 2025-11-27 02:30:23,072 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898687915/pilotlog.txt
[2025-11-26 18:30:59] 2025-11-27 02:30:23,157 | WARNING  | 
[2025-11-26 18:30:59] [begin log extracts]
[2025-11-26 18:30:59] - Log from pilotlog.txt -
[2025-11-26 18:30:59] 2025-11-27 02:30:23,057 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:30:59] 2025-11-27 02:30:23,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:30:59] 2025-11-27 02:30:23,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 18:30:59] 2025-11-27 02:30:23,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 18:30:59] 2025-11-27 02:30:23,059 | WARNING  | wrong length of table data, x=[1764210177.0, 1764210238.0, 1764210299.0, 1764210360.0, 1764210421.0], y=[1382.0, 296853.0, 644227.0, 390347.0, 549984.0] (must be s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,069 | INFO     | monitor loop #109: job 0:6898687915 is in state 'failed'
[2025-11-26 18:30:59] 2025-11-27 02:30:23,069 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | could have reported an average CPU frequency of 1310 MHz (4 samples)
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | ..............................
[2025-11-26 18:30:59] 2025-11-27 02:30:23,070 | INFO     | . Timing measurements:
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . get job = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . initial setup = 3 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . payload setup = 37 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . stage-in = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . payload execution = 341 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . stage-out = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | . log creation = 0 s
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | ..............................
[2025-11-26 18:30:59] 2025-11-27 02:30:23,071 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 18:30:59] 2025-11-27 02:30:23,072 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898687915/pilotlog.txt
[2025-11-26 18:30:59] [end log extracts]
[2025-11-26 18:30:59] 2025-11-27 02:30:23,158 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 18:30:59] 2025-11-27 02:30:23,159 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 18:30:59] 2025-11-27 02:30:24,066 | INFO     | 
[2025-11-26 18:30:59] 2025-11-27 02:30:24,066 | INFO     | job summary report
[2025-11-26 18:30:59] 2025-11-27 02:30:24,066 | INFO     | --------------------------------------------------
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | PanDA job id: 6898687915
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | task id: 47556161
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 18:27:56,650 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | pilot state: failed 
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | transexitcode: 65
[2025-11-26 18:30:59] 2025-11-27 02:30:24,067 | INFO     | exeerrorcode: 65
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | exitcode: 65
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | cpuconsumptiontime: 86 s
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | nevents: 0
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | neventsw: 0
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | pid: 758813
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | pgrp: 758813
[2025-11-26 18:30:59] 2025-11-27 02:30:24,068 | INFO     | corecount: 12
[2025-11-26 18:30:59] 2025-11-27 02:30:24,069 | INFO     | event service: False
[2025-11-26 18:30:59] 2025-11-27 02:30:24,069 | INFO     | sizes: {0: 2284086, 1: 2284170, 2: 2284369, 3: 2284397, 15: 2284397, 26: 2284843, 38: 2284843, 384: 2310411, 387: 2314701, 389: 2314757, 523: 2314951}
[2025-11-26 18:30:59] 2025-11-27 02:30:24,069 | INFO     | --------------------------------------------------
[2025-11-26 18:30:59] 2025-11-27 02:30:24,069 | INFO     | 
[2025-11-26 18:30:59] 2025-11-27 02:30:24,069 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 18:30:59] 2025-11-27 02:30:24,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,303 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:30:59] 2025-11-27 02:30:24,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,303 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:30:59] 2025-11-27 02:30:24,304 | INFO     | job 6898687915 has completed (purged errors)
[2025-11-26 18:30:59] 2025-11-27 02:30:24,316 | INFO     | overall cleanup function is called
[2025-11-26 18:30:59] 2025-11-27 02:30:25,355 | INFO     | --- collectZombieJob: --- 10, [758813]
[2025-11-26 18:30:59] 2025-11-27 02:30:25,355 | INFO     | zombie collector waiting for pid 758813
[2025-11-26 18:30:59] 2025-11-27 02:30:25,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:30:59] 2025-11-27 02:30:25,356 | INFO     | collected zombie processes
[2025-11-26 18:30:59] 2025-11-27 02:30:25,356 | INFO     | will attempt to kill all subprocesses of pid=758813
[2025-11-26 18:30:59] 2025-11-27 02:30:25,520 | INFO     | PID=751584 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 18:30:59] 2025-11-27 02:30:25,521 | INFO     | .. there are 19 such processes running
[2025-11-26 18:30:59] 2025-11-27 02:30:26,883 | INFO     | process IDs to be killed: [758813] (in reverse order)
[2025-11-26 18:30:59] 2025-11-27 02:30:26,998 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:30:59] 2025-11-27 02:30:26,999 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:30:59] 2025-11-27 02:30:27,034 | INFO     | did not find any defunct processes belonging to 758813
[2025-11-26 18:30:59] 2025-11-27 02:30:27,063 | INFO     | did not find any defunct processes belonging to 758813
[2025-11-26 18:30:59] 2025-11-27 02:30:27,065 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:30:59] 2025-11-27 02:30:27,065 | INFO     | ready for new job
[2025-11-26 18:30:59] 2025-11-27 02:30:27,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:30:59] 2025-11-27 02:30:27,082 | INFO     | ***************************************
[2025-11-26 18:30:59] 2025-11-27 02:30:27,082 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:30:59] 2025-11-27 02:30:27,082 | INFO     | ***************************************
[2025-11-26 18:30:59] 2025-11-27 02:30:27,082 | INFO     | 
[2025-11-26 18:30:59] 2025-11-27 02:30:27,088 | INFO     | architecture information:
[2025-11-26 18:30:59] 2025-11-27 02:30:27,095 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:30:59] 2025-11-27 02:30:27,129 | INFO     | cat /etc/os-release:
[2025-11-26 18:30:59] NAME="CentOS Linux"
[2025-11-26 18:30:59] VERSION="7 (Core)"
[2025-11-26 18:30:59] ID="centos"
[2025-11-26 18:30:59] ID_LIKE="rhel fedora"
[2025-11-26 18:30:59] VERSION_ID="7"
[2025-11-26 18:30:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:30:59] ANSI_COLOR="0;31"
[2025-11-26 18:30:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:30:59] HOME_URL="https://www.centos.org/"
[2025-11-26 18:30:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:30:59] 
[2025-11-26 18:30:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:30:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:30:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:30:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:30:59] 
[2025-11-26 18:30:59] 2025-11-27 02:30:27,130 | INFO     | ***************************************
[2025-11-26 18:30:59] 2025-11-27 02:30:27,639 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 18:30:59] 2025-11-27 02:30:27,679 | INFO     | sufficient remaining disk space (1894558728192 B)
[2025-11-26 18:30:59] 2025-11-27 02:30:27,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:30:59] 2025-11-27 02:30:27,680 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:30:59] 2025-11-27 02:30:27,680 | INFO     | update_server=False
[2025-11-26 18:30:59] 2025-11-27 02:30:27,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:30:59] 2025-11-27 02:30:27,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:30:59] 2025-11-27 02:30:27,702 | INFO     | aborting loop
[2025-11-26 18:30:59] 2025-11-27 02:30:27,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:30:59] 2025-11-27 02:30:27,766 | INFO     | all payload control threads have been joined
[2025-11-26 18:30:59] 2025-11-27 02:30:27,766 | INFO     | all job control threads have been joined
[2025-11-26 18:30:59] 2025-11-27 02:30:28,652 | INFO     | all data control threads have been joined
[2025-11-26 18:30:59] 2025-11-27 02:30:28,686 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:28,707 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:28,772 | INFO     | [payload] control thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:28,773 | INFO     | [job] control thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:28,781 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:28,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:30:59] 2025-11-27 02:30:29,093 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:29,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:30:59] 2025-11-27 02:30:29,235 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:29,280 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:29,348 | INFO     | [job] validate thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:29,676 | INFO     | [data] control thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:29,798 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:29,919 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:30,104 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:30,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:30,986 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:31,380 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:30:59] 2025-11-27 02:30:31,715 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:30:59] 2025-11-27 02:30:32,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693877233472)>', '<ExcThread(monitor, started 139693039531776)>']
[2025-11-26 18:30:59] 2025-11-27 02:30:37,786 | INFO     | all workflow threads have been joined
[2025-11-26 18:30:59] 2025-11-27 02:30:37,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:30:59] 2025-11-27 02:30:37,787 | INFO     | traces error code: 0
[2025-11-26 18:30:59] 2025-11-27 02:30:37,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:30:59] 2025-11-27 02:30:58,387 | INFO     | PID=751584 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 18:30:59] 2025-11-27 02:30:58,388 | INFO     | .. there are 19 such processes running
[2025-11-26 18:30:59] 2025-11-27 02:30:58,389 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:30:59] 2025-11-27 02:30:58,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:30:59] 2025-11-27 02:30:58,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:30:59] 2025-11-27 02:30:58,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:30:59] 2025-11-27 02:30:58,390 | INFO     | [monitor] control thread has ended
[2025-11-26 18:30:59] 2025-11-27 02:30:58,969 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:30:59] 2025-11-27 02:30:58,976 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:30:59] 2025-11-27 02:30:58,984 [wrapper] pilotpid: 751584
[2025-11-26 18:30:59] 2025-11-27 02:30:58,987 [wrapper] Pilot exit status: 0
[2025-11-26 18:30:59] 2025-11-27 02:30:59,082 [wrapper] pandaids: 6898687915
[2025-11-26 18:30:59] 2025-11-27 02:30:59,254 [wrapper] cleanup supervisor_pilot  751590 751585
[2025-11-26 18:30:59] 2025-11-27 02:30:59,258 [wrapper] Test setup, not cleaning
[2025-11-26 18:30:59] 2025-11-27 02:30:59,261 [wrapper] apfmon messages muted
[2025-11-26 18:30:59] 2025-11-27 02:30:59,264 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:30:59] 2025-11-27 02:30:59,267 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:30:59]  *** Error codes and diagnostics ***
[2025-11-26 18:30:59]     "exeErrorCode": 65,
[2025-11-26 18:30:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 18:30:59]     "pilotErrorCode": 1305,
[2025-11-26 18:30:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 18:30:59]  *** Listing of results directory ***
[2025-11-26 18:30:59] total 402712
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc    576529 Nov 26 08:12 pilot3.tar.gz
[2025-11-26 18:30:59] -rwx------. 1 boinc boinc     36292 Nov 26 08:36 runpilot2-wrapper.sh
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc      5112 Nov 26 08:37 queuedata.json
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc       100 Nov 26 18:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:30:59] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 18:19 run_atlas
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc       105 Nov 26 18:19 job.xml
[2025-11-26 18:30:59] -rw-r--r--. 2 boinc boinc 408083542 Nov 26 18:19 EVNT.47483658._002677.pool.root.1
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc      6595 Nov 26 18:19 init_data.xml
[2025-11-26 18:30:59] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:19 start_atlas.sh
[2025-11-26 18:30:59] drwxrwx--x. 2 boinc boinc      4096 Nov 26 18:19 shared
[2025-11-26 18:30:59] -rw-r--r--. 2 boinc boinc    590110 Nov 26 18:19 input.tar.gz
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc         0 Nov 26 18:19 boinc_lockfile
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc      2787 Nov 26 18:19 pandaJob.out
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc    991554 Nov 26 18:20 agis_schedconf.cvmfs.json
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc   1516240 Nov 26 18:20 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:30:59] drwx------. 5 boinc boinc      4096 Nov 26 18:20 pilot3
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc       525 Nov 26 18:27 boinc_task_state.xml
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc       995 Nov 26 18:28 memory_monitor_summary.json
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc     52502 Nov 26 18:28 log.47556161._006599.job.log.tgz.1
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc     10343 Nov 26 18:30 heartbeat.json
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc        23 Nov 26 18:30 wrapper_checkpoint.txt
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc      8192 Nov 26 18:30 boinc_mmap_file
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc        95 Nov 26 18:30 pilot_heartbeat.json
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc       822 Nov 26 18:30 pilotlog.txt
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc    137577 Nov 26 18:30 log.47556161._006599.job.log.1
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc       186 Nov 26 18:30 output.list
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc       620 Nov 26 18:30 runtime_log
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc    215040 Nov 26 18:30 result.tar.gz
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc       647 Nov 26 18:30 s1yNDmFgXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIFNKDmypNAVo.diag
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc      8636 Nov 26 18:30 runtime_log.err
[2025-11-26 18:30:59] -rw-r--r--. 1 boinc boinc     22661 Nov 26 18:30 stderr.txt
[2025-11-26 18:30:59] No HITS result produced
[2025-11-26 18:30:59]  *** Contents of shared directory: ***
[2025-11-26 18:30:59] total 399332
[2025-11-26 18:30:59] -rw-r--r--. 2 boinc boinc 408083542 Nov 26 18:19 ATLAS.root_0
[2025-11-26 18:30:59] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:19 start_atlas.sh
[2025-11-26 18:30:59] -rw-r--r--. 2 boinc boinc    590110 Nov 26 18:19 input.tar.gz
[2025-11-26 18:30:59] -rw-------. 1 boinc boinc    215040 Nov 26 18:30 result.tar.gz
18:31:00 (747659): run_atlas exited; CPU time 94.970635
18:31:00 (747659): called boinc_finish(0)

</stderr_txt>
]]>

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