Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:56 (2201450): wrapper (7.7.26015): starting
00:02:56 (2201450): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:02:56] Arguments: --nthreads 9
[2025-11-27 00:02:56] Threads: 9
[2025-11-27 00:02:56] Checking for CVMFS
[2025-11-27 00:02:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:57] 2.13.3.0 12460 31044 349144 153347 0 745 27823150 32935937 63764 16776704 0 324448918 99.644 299230960 36877 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:57] CVMFS is ok
[2025-11-27 00:02:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:57] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:57] Checking for apptainer binary...
[2025-11-27 00:02:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:57] Running /usr/bin/apptainer --version
[2025-11-27 00:02:57] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:58] c7-6-31.aglt2.org
[2025-11-27 00:02:58] apptainer works
[2025-11-27 00:02:58] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:02:58] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:02:58] Starting ATLAS job with PandaID=6898378376
[2025-11-27 00:02:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:02:42]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:02:42] 2025-11-27 16:24:22,580 | INFO     | PID=2226783 has CPU usage=17.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 12:02:42] 2025-11-27 16:24:22,581 | INFO     | .. there are 92 such processes running
[2025-11-27 12:02:42] 2025-11-27 16:24:22,991 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 12:02:42] 2025-11-27 16:24:23,005 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3414.397895833332
[2025-11-27 12:02:42] 2025-11-27 16:24:23,019 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6898378376/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,019 | INFO     | extracted standard info from prmon json
[2025-11-27 12:02:42] 2025-11-27 16:24:23,019 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:02:42] 2025-11-27 16:24:23,019 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:02:42] 2025-11-27 16:24:23,029 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:02:42] 2025-11-27 16:24:23,029 | INFO     | sum of square deviations: 92428059396.20802
[2025-11-27 12:02:42] 2025-11-27 16:24:23,039 | INFO     | sum of deviations: 1073960630959.2756
[2025-11-27 12:02:42] 2025-11-27 16:24:23,039 | INFO     | mean x: 1764240293.4655688
[2025-11-27 12:02:42] 2025-11-27 16:24:23,039 | INFO     | mean y: 3024536.5553892218
[2025-11-27 12:02:42] 2025-11-27 16:24:23,039 | INFO     | intersect: -20496428022.672455
[2025-11-27 12:02:42] 2025-11-27 16:24:23,040 | INFO     | chi2: 8.158621872854125
[2025-11-27 12:02:42] 2025-11-27 16:24:23,040 | INFO     | sum of square deviations: 90368662141.90337
[2025-11-27 12:02:42] 2025-11-27 16:24:23,050 | INFO     | sum of deviations: 1291167552150.9746
[2025-11-27 12:02:42] 2025-11-27 16:24:23,050 | INFO     | mean x: 1764240140.9879336
[2025-11-27 12:02:42] 2025-11-27 16:24:23,050 | INFO     | mean y: 3040605.871794872
[2025-11-27 12:02:42] 2025-11-27 16:24:23,050 | INFO     | intersect: -25204034172.649456
[2025-11-27 12:02:42] 2025-11-27 16:24:23,051 | INFO     | chi2: 5.3926405118560234
[2025-11-27 12:02:42] 2025-11-27 16:24:23,051 | INFO     | current chi2=5.3926405118560234 (change=33.90255614371892 %)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,052 | INFO     | sum of square deviations: 88339819840.5
[2025-11-27 12:02:42] 2025-11-27 16:24:23,061 | INFO     | sum of deviations: 1324977197751.5002
[2025-11-27 12:02:42] 2025-11-27 16:24:23,061 | INFO     | mean x: 1764239988.5
[2025-11-27 12:02:42] 2025-11-27 16:24:23,061 | INFO     | mean y: 3043131.050151976
[2025-11-27 12:02:42] 2025-11-27 16:24:23,061 | INFO     | intersect: -26458158174.821095
[2025-11-27 12:02:42] 2025-11-27 16:24:23,062 | INFO     | chi2: 5.11296870947701
[2025-11-27 12:02:42] 2025-11-27 16:24:23,062 | INFO     | current chi2=5.11296870947701 (change=5.186175525035264 %)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,062 | INFO     | right removable region: 657
[2025-11-27 12:02:42] 2025-11-27 16:24:23,063 | INFO     | sum of square deviations: 90367453731.90344
[2025-11-27 12:02:42] 2025-11-27 16:24:23,072 | INFO     | sum of deviations: 799449702616.6194
[2025-11-27 12:02:42] 2025-11-27 16:24:23,072 | INFO     | mean x: 1764240445.9879336
[2025-11-27 12:02:42] 2025-11-27 16:24:23,072 | INFO     | mean y: 3044849.452488688
[2025-11-27 12:02:42] 2025-11-27 16:24:23,072 | INFO     | intersect: -15604582029.95054
[2025-11-27 12:02:42] 2025-11-27 16:24:23,073 | INFO     | chi2: 4.1812092318275775
[2025-11-27 12:02:42] 2025-11-27 16:24:23,073 | INFO     | current chi2=4.1812092318275775 (change=48.75103544460668 %)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,074 | INFO     | sum of square deviations: 88337847034.48645
[2025-11-27 12:02:42] 2025-11-27 16:24:23,083 | INFO     | sum of deviations: 679758395778.7408
[2025-11-27 12:02:42] 2025-11-27 16:24:23,083 | INFO     | mean x: 1764240598.5045593
[2025-11-27 12:02:42] 2025-11-27 16:24:23,083 | INFO     | mean y: 3053825.4194528875
[2025-11-27 12:02:42] 2025-11-27 16:24:23,083 | INFO     | intersect: -13572750875.129831
[2025-11-27 12:02:42] 2025-11-27 16:24:23,084 | INFO     | chi2: 3.3471003691393624
[2025-11-27 12:02:42] 2025-11-27 16:24:23,084 | INFO     | current chi2=3.3471003691393624 (change=19.948986440069444 %)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,084 | INFO     | left removable region: 20
[2025-11-27 12:02:42] 2025-11-27 16:24:23,084 | INFO     | sum of square deviations: 80147377097.73311
[2025-11-27 12:02:42] 2025-11-27 16:24:23,096 | INFO     | sum of deviations: 831268363745.2809
[2025-11-27 12:02:42] 2025-11-27 16:24:23,096 | INFO     | mean x: 1764240568.0596547
[2025-11-27 12:02:42] 2025-11-27 16:24:23,096 | INFO     | mean y: 3080757.361067504
[2025-11-27 12:02:42] 2025-11-27 16:24:23,096 | INFO     | intersect: -18295177069.28806
[2025-11-27 12:02:42] 2025-11-27 16:24:23,097 | INFO     | chi2: 0.13264418108951137
[2025-11-27 12:02:42] 2025-11-27 16:24:23,097 | INFO     | current memory leak: 10.37 B/s (using 637 data points, chi2=0.13)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,098 | INFO     | could have reported an average CPU frequency of 3403 MHz (26 samples)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,098 | INFO     | ..............................
[2025-11-27 12:02:42] 2025-11-27 16:24:23,102 | INFO     | . Timing measurements:
[2025-11-27 12:02:42] 2025-11-27 16:24:23,102 | INFO     | . get job = 0 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,102 | INFO     | . initial setup = 3 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,102 | INFO     | . payload setup = 32 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,102 | INFO     | . stage-in = 0 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,102 | INFO     | . payload execution = 40735 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,102 | INFO     | . stage-out = 3 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,103 | INFO     | . log creation = 1 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,103 | INFO     | ..............................
[2025-11-27 12:02:42] 2025-11-27 16:24:23,179 | INFO     | 
[2025-11-27 12:02:42] 2025-11-27 16:24:23,179 | INFO     | job summary report
[2025-11-27 12:02:42] 2025-11-27 16:24:23,179 | INFO     | --------------------------------------------------
[2025-11-27 12:02:42] 2025-11-27 16:24:23,179 | INFO     | PanDA job id: 6898378376
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | task id: 47556173
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | errors: (none)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | pilot state: finished 
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | transexitcode: 0
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | exeerrorcode: 0
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | exeerrordiag: 
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | exitcode: 0
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | exitmsg: OK
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | cpuconsumptiontime: 183643 s
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | nevents: 1000
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | neventsw: 0
[2025-11-27 12:02:42] 2025-11-27 16:24:23,180 | INFO     | pid: 2268115
[2025-11-27 12:02:42] 2025-11-27 16:24:23,181 | INFO     | pgrp: 2268115
[2025-11-27 12:02:42] 2025-11-27 16:24:23,181 | INFO     | corecount: 9
[2025-11-27 12:02:42] 2025-11-27 16:24:23,181 | INFO     | event service: False
[2025-11-27 12:02:42] 2025-11-27 16:24:23,181 | INFO     | sizes: {0: 2284139, 1: 2284338, 11: 2284338, 19: 2284628, 22: 2284656, 40768: 2328076, 40773: 2337070, 40774: 2337126, 40786: 2337372}
[2025-11-27 12:02:42] 2025-11-27 16:24:23,181 | INFO     | --------------------------------------------------
[2025-11-27 12:02:42] 2025-11-27 16:24:23,181 | INFO     | 
[2025-11-27 12:02:42] 2025-11-27 16:24:23,181 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 12:02:42] 2025-11-27 16:24:23,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:02:42] 2025-11-27 16:24:23,216 | INFO     | job 6898378376 has completed (purged errors)
[2025-11-27 12:02:42] 2025-11-27 16:24:23,216 | INFO     | overall cleanup function is called
[2025-11-27 12:02:42] 2025-11-27 16:24:24,247 | INFO     | --- collectZombieJob: --- 10, [2268115]
[2025-11-27 12:02:42] 2025-11-27 16:24:24,247 | INFO     | zombie collector waiting for pid 2268115
[2025-11-27 12:02:42] 2025-11-27 16:24:24,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:02:42] 2025-11-27 16:24:24,247 | INFO     | collected zombie processes
[2025-11-27 12:02:42] 2025-11-27 16:24:24,248 | INFO     | will attempt to kill all subprocesses of pid=2268115
[2025-11-27 12:02:42] 2025-11-27 16:24:24,982 | INFO     | process IDs to be killed: [2268115] (in reverse order)
[2025-11-27 12:02:42] 2025-11-27 16:24:25,412 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:02:42] 2025-11-27 16:24:25,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:02:42] 2025-11-27 16:24:25,446 | INFO     | did not find any defunct processes belonging to 2268115
[2025-11-27 12:02:42] 2025-11-27 16:24:25,476 | INFO     | did not find any defunct processes belonging to 2268115
[2025-11-27 12:02:42] 2025-11-27 16:24:25,477 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:02:42] 2025-11-27 16:24:25,477 | INFO     | ready for new job
[2025-11-27 12:02:42] 2025-11-27 16:24:25,477 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:02:42] 2025-11-27 16:24:25,480 | INFO     | ***************************************
[2025-11-27 12:02:42] 2025-11-27 16:24:25,480 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:02:42] 2025-11-27 16:24:25,480 | INFO     | ***************************************
[2025-11-27 12:02:42] 2025-11-27 16:24:25,480 | INFO     | 
[2025-11-27 12:02:42] 2025-11-27 16:24:25,484 | INFO     | architecture information:
[2025-11-27 12:02:42] 2025-11-27 16:24:25,485 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:02:42] 2025-11-27 16:24:25,507 | INFO     | cat /etc/os-release:
[2025-11-27 12:02:42] NAME="CentOS Linux"
[2025-11-27 12:02:42] VERSION="7 (Core)"
[2025-11-27 12:02:42] ID="centos"
[2025-11-27 12:02:42] ID_LIKE="rhel fedora"
[2025-11-27 12:02:42] VERSION_ID="7"
[2025-11-27 12:02:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:02:42] ANSI_COLOR="0;31"
[2025-11-27 12:02:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:02:42] HOME_URL="https://www.centos.org/"
[2025-11-27 12:02:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:02:42] 
[2025-11-27 12:02:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:02:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:02:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:02:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:02:42] 
[2025-11-27 12:02:42] 2025-11-27 16:24:25,507 | INFO     | ***************************************
[2025-11-27 12:02:42] 2025-11-27 16:24:26,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 12:02:42] 2025-11-27 16:24:26,037 | INFO     | sufficient remaining disk space (65719500800 B)
[2025-11-27 12:02:42] 2025-11-27 16:24:26,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:02:42] 2025-11-27 16:24:26,037 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:02:42] 2025-11-27 16:24:26,037 | INFO     | update_server=False
[2025-11-27 12:02:42] 2025-11-27 16:24:26,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:02:42] 2025-11-27 16:24:26,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:02:42] 2025-11-27 16:24:26,038 | INFO     | aborting loop
[2025-11-27 12:02:42] 2025-11-27 16:24:26,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:02:42] 2025-11-27 16:24:26,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:02:42] 2025-11-27 16:24:26,552 | INFO     | all data control threads have been joined
[2025-11-27 12:02:42] 2025-11-27 16:24:27,046 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,046 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,109 | INFO     | all payload control threads have been joined
[2025-11-27 12:02:42] 2025-11-27 16:24:27,170 | INFO     | all job control threads have been joined
[2025-11-27 12:02:42] 2025-11-27 16:24:27,202 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,206 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,214 | INFO     | [job] validate thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,229 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,303 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,396 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:27,558 | INFO     | [data] control thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:28,051 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:28,115 | INFO     | [payload] control thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:28,175 | INFO     | [job] control thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:28,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:02:42] 2025-11-27 16:24:28,303 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:29,196 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:30,468 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:36,565 | INFO     | job.realtimelogging is not enabled
[2025-11-27 12:02:42] 2025-11-27 16:24:37,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:02:42] 2025-11-27 16:24:55,553 | INFO     | PID=2226783 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:02:42] 2025-11-27 16:24:55,553 | INFO     | .. there are 91 such processes running
[2025-11-27 12:02:42] 2025-11-27 16:24:55,553 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:02:42] 2025-11-27 16:24:55,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:02:42] 2025-11-27 16:24:55,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:02:42] 2025-11-27 16:25:05,139 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:02:42] 2025-11-27 16:25:05,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038303500096)>', '<ExcThread(monitor, started 140038031513344)>']
[2025-11-27 12:02:42] 2025-11-27 16:25:05,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:02:42] 2025-11-27 16:25:05,628 | INFO     | [monitor] control thread has ended
[2025-11-27 12:02:42] 2025-11-27 16:25:10,637 | INFO     | all workflow threads have been joined
[2025-11-27 12:02:42] 2025-11-27 16:25:10,637 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:02:42] 2025-11-27 16:25:10,638 | INFO     | traces error code: 0
[2025-11-27 12:02:42] 2025-11-27 16:25:10,638 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:02:42] 2025-11-27 16:25:10,762 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:02:42] 2025-11-27 16:25:10,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:02:42] 2025-11-27 16:25:10,768 [wrapper] pilotpid: 2226783
[2025-11-27 12:02:42] 2025-11-27 16:25:10,771 [wrapper] Pilot exit status: 0
[2025-11-27 12:02:42] 2025-11-27 16:25:10,784 [wrapper] pandaids: 6898378376
[2025-11-27 12:02:42] 2025-11-27 16:25:11,094 [wrapper] cleanup supervisor_pilot  511144 2226784
[2025-11-27 12:02:42] 2025-11-27 16:25:11,102 [wrapper] Test setup, not cleaning
[2025-11-27 12:02:42] 2025-11-27 16:25:11,105 [wrapper] apfmon messages muted
[2025-11-27 12:02:42] 2025-11-27 16:25:11,108 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:02:42] 2025-11-27 16:25:11,118 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:02:42]  *** Error codes and diagnostics ***
[2025-11-27 12:02:42]     "exeErrorCode": 0,
[2025-11-27 12:02:42]     "exeErrorDiag": "",
[2025-11-27 12:02:42]     "pilotErrorCode": 0,
[2025-11-27 12:02:42]     "pilotErrorDiag": "",
[2025-11-27 12:02:42]  *** Listing of results directory ***
[2025-11-27 12:02:42] total 1320388
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 12:02:42] -rwx------. 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:37 queuedata.json
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:02:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 12:02:42] -rw-r--r--. 2 boincer umatlas 410403995 Nov 27 00:02 EVNT.47483658._003208.pool.root.1
[2025-11-27 12:02:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:02:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 12:02:42] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:02 input.tar.gz
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas      2784 Nov 27 00:02 pandaJob.out
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 12:02:42] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas       531 Nov 27 11:16 boinc_task_state.xml
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas 923883891 Nov 27 11:23 HITS.47556173._001641.pool.root.1
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas        95 Nov 27 11:23 pilot_heartbeat.json
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas      1068 Nov 27 11:24 memory_monitor_summary.json
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas   1516240 Nov 27 11:24 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas   1991379 Nov 27 11:24 log.47556173._001641.job.log.tgz.1
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas      8623 Nov 27 11:24 heartbeat.json
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas      4896 Nov 27 11:25 pilotlog.txt
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas   4936853 Nov 27 11:25 log.47556173._001641.job.log.1
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas       353 Nov 27 11:25 output.list
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas       620 Nov 27 11:25 runtime_log
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas   6952960 Nov 27 11:25 result.tar.gz
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 11:25 runtime_log.err
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas       663 Nov 27 11:25 OeAODmMgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmu7JKDmTMrdHo.diag
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas      6945 Nov 27 11:54 init_data.xml
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas        28 Nov 27 12:02 wrapper_checkpoint.txt
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:02 boinc_mmap_file
[2025-11-27 12:02:42] -rw-r--r--. 1 boincer umatlas     21383 Nov 27 12:02 stderr.txt
[2025-11-27 12:02:42] HITS file was successfully produced:
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas 923883891 Nov 27 11:23 shared/HITS.pool.root.1
[2025-11-27 12:02:42]  *** Contents of shared directory: ***
[2025-11-27 12:02:42] total 1310416
[2025-11-27 12:02:42] -rw-r--r--. 2 boincer umatlas 410403995 Nov 27 00:02 ATLAS.root_0
[2025-11-27 12:02:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:02:42] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:02 input.tar.gz
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas 923883891 Nov 27 11:23 HITS.pool.root.1
[2025-11-27 12:02:42] -rw-------. 1 boincer umatlas   6952960 Nov 27 11:25 result.tar.gz
12:02:43 (2201450): run_atlas exited; CPU time 184525.308285
12:02:43 (2201450): called boinc_finish(0)

</stderr_txt>
]]>

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