Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 14:17:27 (1537250): vboxwrapper version 26210
2025-11-27 14:17:27 (1537250): BOINC client version: 7.18.1
2025-11-27 14:17:29 (1537250): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-11-27 14:17:29 (1537250): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 14:17:29 (1537250): Create VM. (boinc_5125b9c1057e5d1b, slot#1)
2025-11-27 14:17:29 (1537250): Setting Memory Size for VM. (4600MB)
2025-11-27 14:17:29 (1537250): Setting CPU Count for VM. (6)
2025-11-27 14:17:29 (1537250): Setting Chipset Options for VM.
2025-11-27 14:17:29 (1537250): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 14:17:29 (1537250): Setting Boot Options for VM.
2025-11-27 14:17:30 (1537250): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 14:17:30 (1537250): Enabling VM Network Access.
2025-11-27 14:17:30 (1537250): Disabling USB Support for VM.
2025-11-27 14:17:30 (1537250): Disabling COM Port Support for VM.
2025-11-27 14:17:30 (1537250): Disabling LPT Port Support for VM.
2025-11-27 14:17:30 (1537250): Disabling Audio Support for VM.
2025-11-27 14:17:30 (1537250): Disabling Clipboard Support for VM.
2025-11-27 14:17:30 (1537250): Disabling Drag and Drop Support for VM.
2025-11-27 14:17:30 (1537250): Adding storage controller(s) to VM.
2025-11-27 14:17:30 (1537250): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 14:17:30 (1537250): Adding VirtualBox Guest Additions to VM.
2025-11-27 14:17:30 (1537250): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 14:17:30 (1537250): forwarding host port 53527 to guest port 80
2025-11-27 14:17:30 (1537250): Enabling remote desktop for VM.
2025-11-27 14:17:30 (1537250): Required extension pack not installed, remote desktop not enabled.
2025-11-27 14:17:30 (1537250): Enabling shared directory for VM.
2025-11-27 14:17:30 (1537250): Starting VM using VBoxManage interface. (boinc_5125b9c1057e5d1b, slot#1)
2025-11-27 14:17:31 (1537250): Successfully started VM. (PID = '1537743')
2025-11-27 14:17:31 (1537250): Reporting VM Process ID to BOINC.
2025-11-27 14:17:31 (1537250): Guest Log: BIOS: VirtualBox 6.1.50
2025-11-27 14:17:31 (1537250): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 14:17:31 (1537250): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 14:17:31 (1537250): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 14:17:31 (1537250): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 14:17:31 (1537250): Detected: Web Application Enabled (http://localhost:53527)
2025-11-27 14:17:31 (1537250): Preference change detected
2025-11-27 14:17:31 (1537250): Setting CPU throttle for VM. (90%)
2025-11-27 14:17:31 (1537250): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 14:17:33 (1537250): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 14:17:33 (1537250): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 14:17:35 (1537250): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 14:17:35 (1537250): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 14:17:35 (1537250): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 14:17:43 (1537250): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 14:17:43 (1537250): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-11-27 14:17:47 (1537250): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.000126 main     Log opened 2025-11-27T12:17:45.132019000Z
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.000256 main     OS Product: Linux
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.000290 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.000314 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.000338 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.000339 main     Process ID: 1334
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.000339 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 14:17:47 (1537250): Guest Log: 00:00:00.001399 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 14:17:47 (1537250): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 14:17:47 (1537250): Guest Log: [INFO] Mounting shared directory
2025-11-27 14:17:47 (1537250): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 14:17:51 (1537250): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 14:17:51 (1537250): Guest Log: [INFO] Detected branch: prod
2025-11-27 14:17:52 (1537250): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 14:17:52 (1537250): Guest Log: Copying input files
2025-11-27 14:17:53 (1537250): Guest Log: Copied input files into RunAtlas.
2025-11-27 14:17:53 (1537250): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-11-27 14:18:01 (1537250): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 14:18:01 (1537250): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 14:18:01 (1537250): Guest Log: 2.6.3.0 1613 0 31604 153364 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-11-27 14:18:03 (1537250): Guest Log: copied the webapp to /var/www
2025-11-27 14:18:03 (1537250): Guest Log: ATHENA_PROC_NUMBER=6
2025-11-27 14:18:03 (1537250): Guest Log: ATHENA_CORE_NUMBER=6
2025-11-27 14:18:03 (1537250): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 14:18:03 (1537250): Guest Log:  *** Starting ATLAS job. (PandaID=6898686882 taskID=47556161) ***
2025-11-27 15:56:32 (1537250): Status Report: Elapsed Time: '6000.000000'
2025-11-27 15:56:32 (1537250): Status Report: CPU Time: '30757.230000'
2025-11-27 17:35:32 (1537250): Status Report: Elapsed Time: '12000.000000'
2025-11-27 17:35:32 (1537250): Status Report: CPU Time: '63038.050000'
2025-11-27 19:14:33 (1537250): Status Report: Elapsed Time: '18000.000000'
2025-11-27 19:14:33 (1537250): Status Report: CPU Time: '95315.940000'
2025-11-27 20:53:33 (1537250): Status Report: Elapsed Time: '24000.000000'
2025-11-27 20:53:33 (1537250): Status Report: CPU Time: '127605.800000'
2025-11-27 22:32:33 (1537250): Status Report: Elapsed Time: '30000.000000'
2025-11-27 22:32:33 (1537250): Status Report: CPU Time: '159884.540000'
2025-11-27 22:54:12 (1537250): Guest Log:  *** Job finished ***
2025-11-27 22:54:12 (1537250): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:53:24,407 | INFO     | [data] copytool_out thread has finished
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:53:24,976 | INFO     | [data] queue_monitor thread has finished
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:05,524 | INFO     | [monitor] cgroup control has ended
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:06,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329029130048)>', '<ExcThread(monitor, started 140327973279488)>']
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:07,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:07,118 | INFO     | [monitor] control thread has ended
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:11,942 | INFO     | all workflow threads have been joined
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:11,943 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:11,943 | INFO     | traces error code: 0
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:11,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,078 [wrapper] ==== pilot stdout END ====
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,083 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,087 [wrapper] pilotpid: 6034
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,091 [wrapper] Pilot exit status: 0
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,104 [wrapper] pandaids: 6898686882
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,134 [wrapper] cleanup supervisor_pilot  7895 6035
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,138 [wrapper] Test setup, not cleaning
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,142 [wrapper] apfmon messages muted
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,146 [wrapper] ==== wrapper stdout END ====
2025-11-27 22:54:12 (1537250): Guest Log: 2025-11-27 20:54:12,150 [wrapper] ==== wrapper stderr END ====
2025-11-27 22:54:12 (1537250): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 22:54:12 (1537250): Guest Log:     "exeErrorCode": 0,
2025-11-27 22:54:12 (1537250): Guest Log:     "exeErrorDiag": "",
2025-11-27 22:54:12 (1537250): Guest Log:     "pilotErrorCode": 0,
2025-11-27 22:54:12 (1537250): Guest Log:     "pilotErrorDiag": "",
2025-11-27 22:54:12 (1537250): Guest Log:  *** Listing of results directory ***
2025-11-27 22:54:12 (1537250): Guest Log: total 909156
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 26 16:12 pilot3.tar.gz
2025-11-27 22:54:12 (1537250): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 26 16:36 runpilot2-wrapper.sh
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 26 16:37 queuedata.json
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas      7498 Nov 27 12:17 init_data.xml
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 27 12:17 start_atlas.sh
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas    590107 Nov 27 12:17 input.tar.gz
2025-11-27 22:54:12 (1537250): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 12:17 EVNT.47483658._002662.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 27 12:18 pandaJob.out
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas        69 Nov 27 12:18 setup.sh.local
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas    991566 Nov 27 12:18 agis_schedconf.cvmfs.json
2025-11-27 22:54:12 (1537250): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 12:18 pilot3
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas 916145721 Nov 27 20:52 HITS.47556161._006441.pool.root.1
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas      1044 Nov 27 20:53 memory_monitor_summary.json
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 20:53 agis_ddmendpoints.agis.ALL.json
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas   1542923 Nov 27 20:53 log.47556161._006441.job.log.tgz.1
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas      8658 Nov 27 20:53 heartbeat.json
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 20:53 pilot_heartbeat.json
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 27 20:54 pilotlog.txt
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas   3949448 Nov 27 20:54 log.47556161._006441.job.log.1
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 20:54 output.list
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 20:54 runtime_log
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas   5509120 Nov 27 20:54 result.tar.gz
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 atlas atlas      9388 Nov 27 20:54 runtime_log.err
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas       681 Nov 27 20:54 FC6MDmCgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmE7JKDmd9veim.diag
2025-11-27 22:54:12 (1537250): Guest Log: Looking for outputfile HITS.47556161._006441.pool.root.1
2025-11-27 22:54:12 (1537250): Guest Log: HITS file was successfully produced
2025-11-27 22:54:12 (1537250): Guest Log: -rw-------. 1 atlas atlas 916145721 Nov 27 20:52 /home/atlas/RunAtlas/HITS.47556161._006441.pool.root.1
2025-11-27 22:54:12 (1537250): Guest Log: Successfully finished the ATLAS job!
2025-11-27 22:54:12 (1537250): Guest Log: Copying the results back to the shared directory!
2025-11-27 22:54:12 (1537250): Guest Log:  *** Contents of shared directory: ***
2025-11-27 22:54:12 (1537250): Guest Log: total 401680
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 root root 410454151 Nov 27 12:17 ATLAS.root_0
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 root root      7498 Nov 27 12:17 init_data.xml
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 root root    590107 Nov 27 12:17 input.tar.gz
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 root root   5509120 Nov 27 20:54 result.tar.gz
2025-11-27 22:54:12 (1537250): Guest Log: -rw-r--r--. 1 root root     15847 Nov 27 12:17 start_atlas.sh
2025-11-27 22:54:12 (1537250): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 22:54:12 (1537250): VM Completion File Detected.
2025-11-27 22:54:12 (1537250): Powering off VM.
2025-11-27 22:54:13 (1537250): Successfully stopped VM.
2025-11-27 22:54:13 (1537250): Deregistering VM. (boinc_5125b9c1057e5d1b, slot#1)
2025-11-27 22:54:13 (1537250): Removing network bandwidth throttle group from VM.
2025-11-27 22:54:13 (1537250): Removing VM from VirtualBox.
2025-11-27 22:54:18 (1537250): called boinc_finish(0)

</stderr_txt>
]]>

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