Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:16:16 (16939): wrapper (7.7.26015): starting
20:16:16 (16939): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:16:16] Arguments: --nthreads 8
[2025-11-26 20:16:16] Threads: 8
[2025-11-26 20:16:16] Checking for CVMFS
[2025-11-26 20:16:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:16:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:16:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:16:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:16:17] 2.11.2.0 14221 118435 134928 153341 0 81 10329863 18432001 1885 130560 0 87674973 99.975 4922006 30718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 20:16:17] CVMFS is ok
[2025-11-26 20:16:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 20:16:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 20:16:17] Further information can be found at the LHC@home message board.
[2025-11-26 20:16:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:16:17] Checking for apptainer binary...
[2025-11-26 20:16:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 20:16:17] Running /usr/bin/apptainer --version
[2025-11-26 20:16:17] apptainer version 1.3.2-1.el7
[2025-11-26 20:16:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:16:18] c-206-9.aglt2.org
[2025-11-26 20:16:18] apptainer works
[2025-11-26 20:16:18] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:16:18] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:16:18] Starting ATLAS job with PandaID=6898487655
[2025-11-26 20:16:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:58:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:58:33] 2025-11-27 20:57:26,509 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:58:33] 2025-11-27 20:57:26,525 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:58:33] 2025-11-27 20:57:26,526 | INFO     | sum of square deviations: 485260466979.2783
[2025-11-27 15:58:33] 2025-11-27 20:57:26,551 | INFO     | sum of deviations: 2034903698498.0925
[2025-11-27 15:58:33] 2025-11-27 20:57:26,551 | INFO     | mean x: 1764241594.696813
[2025-11-27 15:58:33] 2025-11-27 20:57:26,551 | INFO     | mean y: 2874741.6735572782
[2025-11-27 15:58:33] 2025-11-27 20:57:26,551 | INFO     | intersect: -7395341248.268234
[2025-11-27 15:58:33] 2025-11-27 20:57:26,552 | INFO     | chi2: 5.611395123269403
[2025-11-27 15:58:33] 2025-11-27 20:57:26,553 | INFO     | sum of square deviations: 479018159466.8397
[2025-11-27 15:58:33] 2025-11-27 20:57:26,591 | INFO     | sum of deviations: 2353390103853.184
[2025-11-27 15:58:33] 2025-11-27 20:57:26,591 | INFO     | mean x: 1764241442.199827
[2025-11-27 15:58:33] 2025-11-27 20:57:26,591 | INFO     | mean y: 2882517.938581315
[2025-11-27 15:58:33] 2025-11-27 20:57:26,592 | INFO     | intersect: -8664739510.215786
[2025-11-27 15:58:33] 2025-11-27 20:57:26,593 | INFO     | chi2: 3.3313615461482473
[2025-11-27 15:58:33] 2025-11-27 20:57:26,594 | INFO     | current chi2=3.3313615461482473 (change=40.63220512963495 %)
[2025-11-27 15:58:33] 2025-11-27 20:57:26,595 | INFO     | sum of square deviations: 472829620404.3807
[2025-11-27 15:58:33] 2025-11-27 20:57:26,641 | INFO     | sum of deviations: 2548333818106.261
[2025-11-27 15:58:33] 2025-11-27 20:57:26,642 | INFO     | mean x: 1764241289.702867
[2025-11-27 15:58:33] 2025-11-27 20:57:26,642 | INFO     | mean y: 2887321.19374457
[2025-11-27 15:58:33] 2025-11-27 20:57:26,642 | INFO     | intersect: -9505560432.151718
[2025-11-27 15:58:33] 2025-11-27 20:57:26,644 | INFO     | chi2: 2.4432457642199807
[2025-11-27 15:58:33] 2025-11-27 20:57:26,644 | INFO     | current chi2=2.4432457642199807 (change=26.65924336417687 %)
[2025-11-27 15:58:33] 2025-11-27 20:57:26,646 | INFO     | sum of square deviations: 466694617229.3999
[2025-11-27 15:58:33] 2025-11-27 20:57:26,679 | INFO     | sum of deviations: 2602179637130.7847
[2025-11-27 15:58:33] 2025-11-27 20:57:26,679 | INFO     | mean x: 1764241137.2059336
[2025-11-27 15:58:33] 2025-11-27 20:57:26,679 | INFO     | mean y: 2888657.14921466
[2025-11-27 15:58:33] 2025-11-27 20:57:26,679 | INFO     | intersect: -9834105798.625992
[2025-11-27 15:58:33] 2025-11-27 20:57:26,681 | INFO     | chi2: 2.2822348290943473
[2025-11-27 15:58:33] 2025-11-27 20:57:26,681 | INFO     | current chi2=2.2822348290943473 (change=6.590042536184937 %)
[2025-11-27 15:58:33] 2025-11-27 20:57:26,681 | INFO     | right removable region: 1145
[2025-11-27 15:58:33] 2025-11-27 20:57:26,683 | INFO     | sum of square deviations: 479017665976.83997
[2025-11-27 15:58:33] 2025-11-27 20:57:26,714 | INFO     | sum of deviations: 1731656686134.2559
[2025-11-27 15:58:33] 2025-11-27 20:57:26,714 | INFO     | mean x: 1764241747.199827
[2025-11-27 15:58:33] 2025-11-27 20:57:26,714 | INFO     | mean y: 2882141.280276817
[2025-11-27 15:58:33] 2025-11-27 20:57:26,715 | INFO     | intersect: -6374880589.590427
[2025-11-27 15:58:33] 2025-11-27 20:57:26,716 | INFO     | chi2: 3.5463470638530556
[2025-11-27 15:58:33] 2025-11-27 20:57:26,717 | INFO     | current chi2=3.5463470638530556 (change=36.80097398333224 %)
[2025-11-27 15:58:33] 2025-11-27 20:57:26,718 | INFO     | sum of square deviations: 472828915245.98956
[2025-11-27 15:58:33] 2025-11-27 20:57:26,764 | INFO     | sum of deviations: 1654206140680.6816
[2025-11-27 15:58:33] 2025-11-27 20:57:26,765 | INFO     | mean x: 1764241899.6993918
[2025-11-27 15:58:33] 2025-11-27 20:57:26,765 | INFO     | mean y: 2884049.3979148567
[2025-11-27 15:58:33] 2025-11-27 20:57:26,765 | INFO     | intersect: -6169369148.379923
[2025-11-27 15:58:33] 2025-11-27 20:57:26,767 | INFO     | chi2: 3.487196146524044
[2025-11-27 15:58:33] 2025-11-27 20:57:26,767 | INFO     | current chi2=3.487196146524044 (change=1.66793932641057 %)
[2025-11-27 15:58:33] 2025-11-27 20:57:26,767 | INFO     | left removable region: 20
[2025-11-27 15:58:33] 2025-11-27 20:57:26,769 | INFO     | sum of square deviations: 441505551630.689
[2025-11-27 15:58:33] 2025-11-27 20:57:26,810 | INFO     | sum of deviations: 2116950242447.0347
[2025-11-27 15:58:33] 2025-11-27 20:57:26,811 | INFO     | mean x: 1764241716.712
[2025-11-27 15:58:33] 2025-11-27 20:57:26,811 | INFO     | mean y: 2900678.568
[2025-11-27 15:58:33] 2025-11-27 20:57:26,811 | INFO     | intersect: -8456363120.345088
[2025-11-27 15:58:33] 2025-11-27 20:57:26,812 | INFO     | chi2: 0.1281297387550181
[2025-11-27 15:58:33] 2025-11-27 20:57:26,812 | INFO     | current memory leak: 4.79 B/s (using 1125 data points, chi2=0.13)
[2025-11-27 15:58:33] 2025-11-27 20:57:26,813 | INFO     | could have reported an average CPU frequency of 2610 MHz (42 samples)
[2025-11-27 15:58:33] 2025-11-27 20:57:26,813 | INFO     | ..............................
[2025-11-27 15:58:33] 2025-11-27 20:57:26,813 | INFO     | . Timing measurements:
[2025-11-27 15:58:33] 2025-11-27 20:57:26,813 | INFO     | . get job = 0 s
[2025-11-27 15:58:33] 2025-11-27 20:57:26,813 | INFO     | . initial setup = 2 s
[2025-11-27 15:58:33] 2025-11-27 20:57:26,813 | INFO     | . payload setup = 5 s
[2025-11-27 15:58:33] 2025-11-27 20:57:26,814 | INFO     | . stage-in = 0 s
[2025-11-27 15:58:33] 2025-11-27 20:57:26,814 | INFO     | . payload execution = 70822 s
[2025-11-27 15:58:33] 2025-11-27 20:57:26,814 | INFO     | . stage-out = 3 s
[2025-11-27 15:58:33] 2025-11-27 20:57:26,814 | INFO     | . log creation = 0 s
[2025-11-27 15:58:33] 2025-11-27 20:57:26,814 | INFO     | ..............................
[2025-11-27 15:58:33] 2025-11-27 20:57:26,924 | INFO     | time since job start (70857s) is within the limit (172800.0s)
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | 
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | job summary report
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | --------------------------------------------------
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | PanDA job id: 6898487655
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | task id: 47556161
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | errors: (none)
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:58:33] 2025-11-27 20:57:27,106 | INFO     | pilot state: finished 
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | transexitcode: 0
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | exeerrorcode: 0
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | exeerrordiag: 
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | exitcode: 0
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | exitmsg: OK
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | cpuconsumptiontime: 544184 s
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | nevents: 1000
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | neventsw: 0
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | pid: 27152
[2025-11-27 15:58:33] 2025-11-27 20:57:27,107 | INFO     | pgrp: 27152
[2025-11-27 15:58:33] 2025-11-27 20:57:27,108 | INFO     | corecount: 8
[2025-11-27 15:58:33] 2025-11-27 20:57:27,108 | INFO     | event service: False
[2025-11-27 15:58:33] 2025-11-27 20:57:27,108 | INFO     | sizes: {0: 2284316, 4: 2284578, 11: 2284606, 70832: 2341459, 70836: 2350453, 70837: 2350509, 70843: 2350883}
[2025-11-27 15:58:33] 2025-11-27 20:57:27,108 | INFO     | --------------------------------------------------
[2025-11-27 15:58:33] 2025-11-27 20:57:27,108 | INFO     | 
[2025-11-27 15:58:33] 2025-11-27 20:57:27,108 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:58:33] 2025-11-27 20:57:27,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,130 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:58:33] 2025-11-27 20:57:27,130 | INFO     | job 6898487655 has completed (purged errors)
[2025-11-27 15:58:33] 2025-11-27 20:57:27,130 | INFO     | overall cleanup function is called
[2025-11-27 15:58:33] 2025-11-27 20:57:28,142 | INFO     | --- collectZombieJob: --- 10, [27152]
[2025-11-27 15:58:33] 2025-11-27 20:57:28,142 | INFO     | zombie collector waiting for pid 27152
[2025-11-27 15:58:33] 2025-11-27 20:57:28,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:58:33] 2025-11-27 20:57:28,142 | INFO     | collected zombie processes
[2025-11-27 15:58:33] 2025-11-27 20:57:28,142 | INFO     | will attempt to kill all subprocesses of pid=27152
[2025-11-27 15:58:33] 2025-11-27 20:57:28,315 | INFO     | process IDs to be killed: [27152] (in reverse order)
[2025-11-27 15:58:33] 2025-11-27 20:57:28,503 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:58:33] 2025-11-27 20:57:28,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:58:33] 2025-11-27 20:57:28,509 | INFO     | did not find any defunct processes belonging to 27152
[2025-11-27 15:58:33] 2025-11-27 20:57:28,514 | INFO     | did not find any defunct processes belonging to 27152
[2025-11-27 15:58:33] 2025-11-27 20:57:28,517 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:58:33] 2025-11-27 20:57:28,517 | INFO     | ready for new job
[2025-11-27 15:58:33] 2025-11-27 20:57:28,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:58:33] 2025-11-27 20:57:28,522 | INFO     | ***************************************
[2025-11-27 15:58:33] 2025-11-27 20:57:28,522 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:58:33] 2025-11-27 20:57:28,523 | INFO     | ***************************************
[2025-11-27 15:58:33] 2025-11-27 20:57:28,523 | INFO     | 
[2025-11-27 15:58:33] 2025-11-27 20:57:28,524 | INFO     | architecture information:
[2025-11-27 15:58:33] 2025-11-27 20:57:28,525 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:58:33] 2025-11-27 20:57:28,537 | INFO     | cat /etc/os-release:
[2025-11-27 15:58:33] NAME="CentOS Linux"
[2025-11-27 15:58:33] VERSION="7 (Core)"
[2025-11-27 15:58:33] ID="centos"
[2025-11-27 15:58:33] ID_LIKE="rhel fedora"
[2025-11-27 15:58:33] VERSION_ID="7"
[2025-11-27 15:58:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:58:33] ANSI_COLOR="0;31"
[2025-11-27 15:58:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:58:33] HOME_URL="https://www.centos.org/"
[2025-11-27 15:58:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:58:33] 
[2025-11-27 15:58:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:58:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:58:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:58:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:58:33] 
[2025-11-27 15:58:33] 2025-11-27 20:57:28,538 | INFO     | ***************************************
[2025-11-27 15:58:33] 2025-11-27 20:57:29,040 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 15:58:33] 2025-11-27 20:57:29,054 | INFO     | sufficient remaining disk space (25754075136 B)
[2025-11-27 15:58:33] 2025-11-27 20:57:29,055 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:58:33] 2025-11-27 20:57:29,055 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:58:33] 2025-11-27 20:57:29,055 | INFO     | update_server=False
[2025-11-27 15:58:33] 2025-11-27 20:57:29,055 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:58:33] 2025-11-27 20:57:29,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:58:33] 2025-11-27 20:57:29,366 | INFO     | all data control threads have been joined
[2025-11-27 15:58:33] 2025-11-27 20:57:29,440 | INFO     | all job control threads have been joined
[2025-11-27 15:58:33] 2025-11-27 20:57:29,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:58:33] 2025-11-27 20:57:29,837 | INFO     | aborting loop
[2025-11-27 15:58:33] 2025-11-27 20:57:30,062 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:30,082 | INFO     | all payload control threads have been joined
[2025-11-27 15:58:33] 2025-11-27 20:57:30,372 | INFO     | [data] control thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:30,437 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:30,443 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:30,446 | INFO     | [job] control thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:30,509 | INFO     | [job] validate thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:30,613 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:30,842 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:31,022 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:31,062 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:31,088 | INFO     | [payload] control thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:31,245 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:31,338 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:31,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:58:33] 2025-11-27 20:57:31,627 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:31,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:58:33] 2025-11-27 20:57:32,938 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:57:35,477 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:58:33] 2025-11-27 20:58:00,148 | INFO     | PID=20641 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 15:58:33] 2025-11-27 20:58:00,149 | INFO     | .. there are 3 such processes running
[2025-11-27 15:58:33] 2025-11-27 20:58:00,149 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:58:33] 2025-11-27 20:58:00,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:58:33] 2025-11-27 20:58:00,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:58:33] 2025-11-27 20:58:26,540 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:58:33] 2025-11-27 20:58:28,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140432017532736)>', '<ExcThread(monitor, started 140431555794688)>']
[2025-11-27 15:58:33] 2025-11-27 20:58:28,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:58:33] 2025-11-27 20:58:28,286 | INFO     | [monitor] control thread has ended
[2025-11-27 15:58:33] 2025-11-27 20:58:33,274 | INFO     | all workflow threads have been joined
[2025-11-27 15:58:33] 2025-11-27 20:58:33,275 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:58:33] 2025-11-27 20:58:33,275 | INFO     | traces error code: 0
[2025-11-27 15:58:33] 2025-11-27 20:58:33,275 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:58:33] 2025-11-27 20:58:33,409 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:58:33] 2025-11-27 20:58:33,411 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:58:33] 2025-11-27 20:58:33,414 [wrapper] pilotpid: 20641
[2025-11-27 15:58:33] 2025-11-27 20:58:33,416 [wrapper] Pilot exit status: 0
[2025-11-27 15:58:33] 2025-11-27 20:58:33,425 [wrapper] pandaids: 6898487655
[2025-11-27 15:58:33] 2025-11-27 20:58:33,467 [wrapper] cleanup supervisor_pilot 17980 20642
[2025-11-27 15:58:33] 2025-11-27 20:58:33,469 [wrapper] Test setup, not cleaning
[2025-11-27 15:58:33] 2025-11-27 20:58:33,472 [wrapper] apfmon messages muted
[2025-11-27 15:58:33] 2025-11-27 20:58:33,474 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:58:33] 2025-11-27 20:58:33,477 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:58:33]  *** Error codes and diagnostics ***
[2025-11-27 15:58:33]     "exeErrorCode": 0,
[2025-11-27 15:58:33]     "exeErrorDiag": "",
[2025-11-27 15:58:33]     "pilotErrorCode": 0,
[2025-11-27 15:58:33]     "pilotErrorDiag": "",
[2025-11-27 15:58:33]  *** Listing of results directory ***
[2025-11-27 15:58:33] total 1328304
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 15:58:33] -rwx------ 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:37 queuedata.json
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas       100 Nov 26 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:58:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 20:16 run_atlas
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas       105 Nov 26 20:16 job.xml
[2025-11-27 15:58:33] -rw-r--r-- 2 boincer umatlas 407072813 Nov 26 20:16 EVNT.47483658._002638.pool.root.1
[2025-11-27 15:58:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 20:16 start_atlas.sh
[2025-11-27 15:58:33] drwxrwx--x 2 boincer umatlas      4096 Nov 26 20:16 shared
[2025-11-27 15:58:33] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 20:16 input.tar.gz
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas         0 Nov 26 20:16 boinc_lockfile
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas      2787 Nov 26 20:16 pandaJob.out
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas        57 Nov 26 20:16 setup.sh.local
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas    991546 Nov 26 20:16 agis_schedconf.cvmfs.json
[2025-11-27 15:58:33] drwx------ 5 boincer umatlas      4096 Nov 26 20:16 pilot3
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas       533 Nov 27 15:43 boinc_task_state.xml
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas      5953 Nov 27 15:56 init_data.xml
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas 924852473 Nov 27 15:56 HITS.47556161._006207.pool.root.1
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas      1069 Nov 27 15:57 memory_monitor_summary.json
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas   1516240 Nov 27 15:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas   2345544 Nov 27 15:57 log.47556161._006207.job.log.tgz.1
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas      8674 Nov 27 15:57 heartbeat.json
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas        95 Nov 27 15:58 pilot_heartbeat.json
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 15:58 boinc_mmap_file
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas        29 Nov 27 15:58 wrapper_checkpoint.txt
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas      4821 Nov 27 15:58 pilotlog.txt
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas   9820478 Nov 27 15:58 log.47556161._006207.job.log.1
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas       353 Nov 27 15:58 output.list
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas       620 Nov 27 15:58 runtime_log
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas  12185600 Nov 27 15:58 result.tar.gz
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 15:58 runtime_log.err
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas       667 Nov 27 15:58 emWKDm1fXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmECNKDmW3ms1m.diag
[2025-11-27 15:58:33] -rw-r--r-- 1 boincer umatlas     21083 Nov 27 15:58 stderr.txt
[2025-11-27 15:58:33] HITS file was successfully produced:
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas 924852473 Nov 27 15:56 shared/HITS.pool.root.1
[2025-11-27 15:58:33]  *** Contents of shared directory: ***
[2025-11-27 15:58:33] total 1313220
[2025-11-27 15:58:33] -rw-r--r-- 2 boincer umatlas 407072813 Nov 26 20:16 ATLAS.root_0
[2025-11-27 15:58:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 20:16 start_atlas.sh
[2025-11-27 15:58:33] -rw-r--r-- 2 boincer umatlas    590107 Nov 26 20:16 input.tar.gz
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas 924852473 Nov 27 15:56 HITS.pool.root.1
[2025-11-27 15:58:33] -rw------- 1 boincer umatlas  12185600 Nov 27 15:58 result.tar.gz
15:58:35 (16939): run_atlas exited; CPU time 542698.040122
15:58:35 (16939): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN