Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:06:52 (13376): wrapper (7.7.26015): starting
20:06:52 (13376): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:06:52] Arguments: --nthreads 8
[2025-11-26 20:06:52] Threads: 8
[2025-11-26 20:06:52] Checking for CVMFS
[2025-11-26 20:06:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:06:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:06:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:06:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:06:53] 2.11.2.0 12825 118418 136480 153341 2 81 10932121 18432001 1885 130560 0 83176384 99.975 4693438 22957 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 20:06:53] CVMFS is ok
[2025-11-26 20:06:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 20:06:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 20:06:53] Further information can be found at the LHC@home message board.
[2025-11-26 20:06:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:06:53] Checking for apptainer binary...
[2025-11-26 20:06:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 20:06:53] Running /usr/bin/apptainer --version
[2025-11-26 20:06:53] apptainer version 1.3.2-1.el7
[2025-11-26 20:06:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:06:53] c-206-8.aglt2.org
[2025-11-26 20:06:53] apptainer works
[2025-11-26 20:06:53] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:06:53] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:06:53] Starting ATLAS job with PandaID=6898412874
[2025-11-26 20:06:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:42:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:42:17] 2025-11-27 20:41:42,250 | INFO     | monitor loop #5027: job 0:6898412874 is in state 'finished'
[2025-11-27 15:42:17] 2025-11-27 20:41:42,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:42:17] 2025-11-27 20:41:43,435 | INFO     | time since job start (70478s) is within the limit (172800.0s)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,033 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 15:42:17] 2025-11-27 20:41:44,038 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2533.375
[2025-11-27 15:42:17] 2025-11-27 20:41:44,041 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898412874/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,041 | INFO     | extracted standard info from prmon json
[2025-11-27 15:42:17] 2025-11-27 20:41:44,042 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:42:17] 2025-11-27 20:41:44,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:42:17] 2025-11-27 20:41:44,057 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:42:17] 2025-11-27 20:41:44,059 | INFO     | sum of square deviations: 477774880642.0881
[2025-11-27 15:42:17] 2025-11-27 20:41:44,096 | INFO     | sum of deviations: 2343476555065.7124
[2025-11-27 15:42:17] 2025-11-27 20:41:44,096 | INFO     | mean x: 1764240849.6337662
[2025-11-27 15:42:17] 2025-11-27 20:41:44,096 | INFO     | mean y: 2865727.843290043
[2025-11-27 15:42:17] 2025-11-27 20:41:44,097 | INFO     | intersect: -8650701540.17547
[2025-11-27 15:42:17] 2025-11-27 20:41:44,098 | INFO     | chi2: 5.3342209916131775
[2025-11-27 15:42:17] 2025-11-27 20:41:44,100 | INFO     | sum of square deviations: 471597043877.5663
[2025-11-27 15:42:17] 2025-11-27 20:41:44,144 | INFO     | sum of deviations: 2686249661604.77
[2025-11-27 15:42:17] 2025-11-27 20:41:44,145 | INFO     | mean x: 1764240697.1365218
[2025-11-27 15:42:17] 2025-11-27 20:41:44,145 | INFO     | mean y: 2874187.2817391306
[2025-11-27 15:42:17] 2025-11-27 20:41:44,145 | INFO     | intersect: -10046363901.035692
[2025-11-27 15:42:17] 2025-11-27 20:41:44,147 | INFO     | chi2: 2.744920478150422
[2025-11-27 15:42:17] 2025-11-27 20:41:44,147 | INFO     | current chi2=2.744920478150422 (change=48.54130561020679 %)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,149 | INFO     | sum of square deviations: 465472696488.02783
[2025-11-27 15:42:17] 2025-11-27 20:41:44,192 | INFO     | sum of deviations: 2795565095831.201
[2025-11-27 15:42:17] 2025-11-27 20:41:44,193 | INFO     | mean x: 1764240544.6393013
[2025-11-27 15:42:17] 2025-11-27 20:41:44,193 | INFO     | mean y: 2876907.048908297
[2025-11-27 15:42:17] 2025-11-27 20:41:44,193 | INFO     | intersect: -10592909536.400871
[2025-11-27 15:42:17] 2025-11-27 20:41:44,195 | INFO     | chi2: 2.3604304710109534
[2025-11-27 15:42:17] 2025-11-27 20:41:44,195 | INFO     | current chi2=2.3604304710109534 (change=14.007327724063796 %)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,195 | INFO     | right removable region: 1144
[2025-11-27 15:42:17] 2025-11-27 20:41:44,197 | INFO     | sum of square deviations: 471596597357.566
[2025-11-27 15:42:17] 2025-11-27 20:41:44,241 | INFO     | sum of deviations: 2047214863194.7014
[2025-11-27 15:42:17] 2025-11-27 20:41:44,241 | INFO     | mean x: 1764241002.1365218
[2025-11-27 15:42:17] 2025-11-27 20:41:44,241 | INFO     | mean y: 2873032.3904347825
[2025-11-27 15:42:17] 2025-11-27 20:41:44,241 | INFO     | intersect: -7655749659.267663
[2025-11-27 15:42:17] 2025-11-27 20:41:44,243 | INFO     | chi2: 3.3402099603029027
[2025-11-27 15:42:17] 2025-11-27 20:41:44,243 | INFO     | current chi2=3.3402099603029027 (change=37.38148521490567 %)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,245 | INFO     | sum of square deviations: 465472014264.8593
[2025-11-27 15:42:17] 2025-11-27 20:41:44,290 | INFO     | sum of deviations: 1971273128189.7998
[2025-11-27 15:42:17] 2025-11-27 20:41:44,291 | INFO     | mean x: 1764241154.6366813
[2025-11-27 15:42:17] 2025-11-27 20:41:44,291 | INFO     | mean y: 2874923.04279476
[2025-11-27 15:42:17] 2025-11-27 20:41:44,291 | INFO     | intersect: -7468683136.735475
[2025-11-27 15:42:17] 2025-11-27 20:41:44,293 | INFO     | chi2: 3.2912821437046995
[2025-11-27 15:42:17] 2025-11-27 20:41:44,293 | INFO     | current chi2=3.2912821437046995 (change=1.4648126069825342 %)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,293 | INFO     | left removable region: 20
[2025-11-27 15:42:17] 2025-11-27 20:41:44,295 | INFO     | sum of square deviations: 440328340017.7899
[2025-11-27 15:42:17] 2025-11-27 20:41:44,340 | INFO     | sum of deviations: 2270248741588.8286
[2025-11-27 15:42:17] 2025-11-27 20:41:44,340 | INFO     | mean x: 1764241124.1405694
[2025-11-27 15:42:17] 2025-11-27 20:41:44,340 | INFO     | mean y: 2890290.8238434163
[2025-11-27 15:42:17] 2025-11-27 20:41:44,340 | INFO     | intersect: -9093199667.359564
[2025-11-27 15:42:17] 2025-11-27 20:41:44,342 | INFO     | chi2: 0.20370314608351792
[2025-11-27 15:42:17] 2025-11-27 20:41:44,342 | INFO     | current memory leak: 5.16 B/s (using 1124 data points, chi2=0.20)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,344 | INFO     | could have reported an average CPU frequency of 2630 MHz (42 samples)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,344 | INFO     | ..............................
[2025-11-27 15:42:17] 2025-11-27 20:41:44,344 | INFO     | . Timing measurements:
[2025-11-27 15:42:17] 2025-11-27 20:41:44,344 | INFO     | . get job = 0 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,344 | INFO     | . initial setup = 2 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,345 | INFO     | . payload setup = 5 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,345 | INFO     | . stage-in = 0 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,345 | INFO     | . payload execution = 70440 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,345 | INFO     | . stage-out = 4 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,345 | INFO     | . log creation = 0 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,345 | INFO     | ..............................
[2025-11-27 15:42:17] 2025-11-27 20:41:44,507 | INFO     | 
[2025-11-27 15:42:17] 2025-11-27 20:41:44,507 | INFO     | job summary report
[2025-11-27 15:42:17] 2025-11-27 20:41:44,508 | INFO     | --------------------------------------------------
[2025-11-27 15:42:17] 2025-11-27 20:41:44,508 | INFO     | PanDA job id: 6898412874
[2025-11-27 15:42:17] 2025-11-27 20:41:44,508 | INFO     | task id: 47556161
[2025-11-27 15:42:17] 2025-11-27 20:41:44,508 | INFO     | errors: (none)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:42:17] 2025-11-27 20:41:44,508 | INFO     | pilot state: finished 
[2025-11-27 15:42:17] 2025-11-27 20:41:44,509 | INFO     | transexitcode: 0
[2025-11-27 15:42:17] 2025-11-27 20:41:44,509 | INFO     | exeerrorcode: 0
[2025-11-27 15:42:17] 2025-11-27 20:41:44,509 | INFO     | exeerrordiag: 
[2025-11-27 15:42:17] 2025-11-27 20:41:44,509 | INFO     | exitcode: 0
[2025-11-27 15:42:17] 2025-11-27 20:41:44,509 | INFO     | exitmsg: OK
[2025-11-27 15:42:17] 2025-11-27 20:41:44,509 | INFO     | cpuconsumptiontime: 543199 s
[2025-11-27 15:42:17] 2025-11-27 20:41:44,510 | INFO     | nevents: 1000
[2025-11-27 15:42:17] 2025-11-27 20:41:44,510 | INFO     | neventsw: 0
[2025-11-27 15:42:17] 2025-11-27 20:41:44,510 | INFO     | pid: 23513
[2025-11-27 15:42:17] 2025-11-27 20:41:44,510 | INFO     | pgrp: 23513
[2025-11-27 15:42:17] 2025-11-27 20:41:44,510 | INFO     | corecount: 8
[2025-11-27 15:42:17] 2025-11-27 20:41:44,510 | INFO     | event service: False
[2025-11-27 15:42:17] 2025-11-27 20:41:44,511 | INFO     | sizes: {0: 2284202, 1: 2284344, 5: 2284606, 12: 2284662, 70450: 2341347, 70455: 2350341, 70459: 2350553, 70463: 2350799}
[2025-11-27 15:42:17] 2025-11-27 20:41:44,511 | INFO     | --------------------------------------------------
[2025-11-27 15:42:17] 2025-11-27 20:41:44,511 | INFO     | 
[2025-11-27 15:42:17] 2025-11-27 20:41:44,511 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 15:42:17] 2025-11-27 20:41:44,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,548 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,548 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:42:17] 2025-11-27 20:41:44,549 | INFO     | job 6898412874 has completed (purged errors)
[2025-11-27 15:42:17] 2025-11-27 20:41:44,549 | INFO     | overall cleanup function is called
[2025-11-27 15:42:17] 2025-11-27 20:41:45,565 | INFO     | --- collectZombieJob: --- 10, [23513]
[2025-11-27 15:42:17] 2025-11-27 20:41:45,565 | INFO     | zombie collector waiting for pid 23513
[2025-11-27 15:42:17] 2025-11-27 20:41:45,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:42:17] 2025-11-27 20:41:45,565 | INFO     | collected zombie processes
[2025-11-27 15:42:17] 2025-11-27 20:41:45,565 | INFO     | will attempt to kill all subprocesses of pid=23513
[2025-11-27 15:42:17] 2025-11-27 20:41:45,727 | INFO     | process IDs to be killed: [23513] (in reverse order)
[2025-11-27 15:42:17] 2025-11-27 20:41:45,769 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:42:17] 2025-11-27 20:41:45,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:42:17] 2025-11-27 20:41:45,772 | INFO     | did not find any defunct processes belonging to 23513
[2025-11-27 15:42:17] 2025-11-27 20:41:45,775 | INFO     | did not find any defunct processes belonging to 23513
[2025-11-27 15:42:17] 2025-11-27 20:41:45,776 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:42:17] 2025-11-27 20:41:45,776 | INFO     | ready for new job
[2025-11-27 15:42:17] 2025-11-27 20:41:45,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:42:17] 2025-11-27 20:41:46,024 | INFO     | ***************************************
[2025-11-27 15:42:17] 2025-11-27 20:41:46,025 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:42:17] 2025-11-27 20:41:46,025 | INFO     | ***************************************
[2025-11-27 15:42:17] 2025-11-27 20:41:46,025 | INFO     | 
[2025-11-27 15:42:17] 2025-11-27 20:41:46,026 | INFO     | architecture information:
[2025-11-27 15:42:17] 2025-11-27 20:41:46,030 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:42:17] 2025-11-27 20:41:46,049 | INFO     | cat /etc/os-release:
[2025-11-27 15:42:17] NAME="CentOS Linux"
[2025-11-27 15:42:17] VERSION="7 (Core)"
[2025-11-27 15:42:17] ID="centos"
[2025-11-27 15:42:17] ID_LIKE="rhel fedora"
[2025-11-27 15:42:17] VERSION_ID="7"
[2025-11-27 15:42:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:42:17] ANSI_COLOR="0;31"
[2025-11-27 15:42:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:42:17] HOME_URL="https://www.centos.org/"
[2025-11-27 15:42:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:42:17] 
[2025-11-27 15:42:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:42:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:42:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:42:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:42:17] 
[2025-11-27 15:42:17] 2025-11-27 20:41:46,049 | INFO     | ***************************************
[2025-11-27 15:42:17] 2025-11-27 20:41:46,552 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 15:42:17] 2025-11-27 20:41:46,567 | INFO     | sufficient remaining disk space (25738346496 B)
[2025-11-27 15:42:17] 2025-11-27 20:41:46,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:42:17] 2025-11-27 20:41:46,568 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:42:17] 2025-11-27 20:41:46,568 | INFO     | update_server=False
[2025-11-27 15:42:17] 2025-11-27 20:41:46,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:42:17] 2025-11-27 20:41:46,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:42:17] 2025-11-27 20:41:46,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:42:17] 2025-11-27 20:41:46,569 | INFO     | aborting loop
[2025-11-27 15:42:17] 2025-11-27 20:41:46,899 | INFO     | all data control threads have been joined
[2025-11-27 15:42:17] 2025-11-27 20:41:47,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:42:17] 2025-11-27 20:41:47,574 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:47,574 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:47,904 | INFO     | [data] control thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:47,935 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:48,015 | INFO     | all payload control threads have been joined
[2025-11-27 15:42:17] 2025-11-27 20:41:48,101 | INFO     | all job control threads have been joined
[2025-11-27 15:42:17] 2025-11-27 20:41:48,215 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:48,312 | INFO     | [job] validate thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:48,314 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:48,415 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:48,712 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:49,017 | INFO     | [payload] control thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:49,068 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:49,106 | INFO     | [job] control thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:49,138 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:49,425 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:49,518 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:42:17] 2025-11-27 20:41:50,523 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:41:50,576 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:42:17] 2025-11-27 20:42:02,054 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:42:17] 2025-11-27 20:42:03,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885007890240)>', '<ExcThread(monitor, started 139884190754560)>']
[2025-11-27 15:42:17] 2025-11-27 20:42:08,055 | INFO     | all workflow threads have been joined
[2025-11-27 15:42:17] 2025-11-27 20:42:08,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:42:17] 2025-11-27 20:42:08,065 | INFO     | traces error code: 0
[2025-11-27 15:42:17] 2025-11-27 20:42:08,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:42:17] 2025-11-27 20:42:16,715 | INFO     | PID=17106 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 15:42:17] 2025-11-27 20:42:16,716 | INFO     | .. there are 3 such processes running
[2025-11-27 15:42:17] 2025-11-27 20:42:16,716 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:42:17] 2025-11-27 20:42:16,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:42:17] 2025-11-27 20:42:16,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:42:17] 2025-11-27 20:42:16,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:42:17] 2025-11-27 20:42:16,717 | INFO     | [monitor] control thread has ended
[2025-11-27 15:42:17] 2025-11-27 20:42:16,835 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:42:17] 2025-11-27 20:42:16,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:42:17] 2025-11-27 20:42:16,840 [wrapper] pilotpid: 17106
[2025-11-27 15:42:17] 2025-11-27 20:42:16,842 [wrapper] Pilot exit status: 0
[2025-11-27 15:42:17] 2025-11-27 20:42:16,870 [wrapper] pandaids: 6898412874
[2025-11-27 15:42:17] 2025-11-27 20:42:16,899 [wrapper] cleanup supervisor_pilot 27696 17107
[2025-11-27 15:42:17] 2025-11-27 20:42:16,901 [wrapper] Test setup, not cleaning
[2025-11-27 15:42:17] 2025-11-27 20:42:16,904 [wrapper] apfmon messages muted
[2025-11-27 15:42:17] 2025-11-27 20:42:16,906 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:42:17] 2025-11-27 20:42:16,909 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:42:17]  *** Error codes and diagnostics ***
[2025-11-27 15:42:17]     "exeErrorCode": 0,
[2025-11-27 15:42:17]     "exeErrorDiag": "",
[2025-11-27 15:42:17]     "pilotErrorCode": 0,
[2025-11-27 15:42:17]     "pilotErrorDiag": "",
[2025-11-27 15:42:17]  *** Listing of results directory ***
[2025-11-27 15:42:17] total 1321692
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:35 queuedata.json
[2025-11-27 15:42:17] -rwx------ 1 boincer umatlas     36292 Nov 26 11:35 runpilot2-wrapper.sh
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas       100 Nov 26 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:42:17] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 20:06 run_atlas
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas       105 Nov 26 20:06 job.xml
[2025-11-27 15:42:17] -rw-r--r-- 2 boincer umatlas 406046546 Nov 26 20:06 EVNT.47483658._002625.pool.root.1
[2025-11-27 15:42:17] -rw-r--r-- 2 boincer umatlas    590106 Nov 26 20:06 input.tar.gz
[2025-11-27 15:42:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 20:06 start_atlas.sh
[2025-11-27 15:42:17] drwxrwx--x 2 boincer umatlas      4096 Nov 26 20:06 shared
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas         0 Nov 26 20:06 boinc_lockfile
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas      2787 Nov 26 20:06 pandaJob.out
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas        57 Nov 26 20:06 setup.sh.local
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas    991546 Nov 26 20:07 agis_schedconf.cvmfs.json
[2025-11-27 15:42:17] drwx------ 5 boincer umatlas      4096 Nov 26 20:07 pilot3
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas       533 Nov 27 15:30 boinc_task_state.xml
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas      5953 Nov 27 15:36 init_data.xml
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas 919355401 Nov 27 15:40 HITS.47556161._006074.pool.root.1
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas        95 Nov 27 15:41 pilot_heartbeat.json
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas      1067 Nov 27 15:41 memory_monitor_summary.json
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas   1516240 Nov 27 15:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas   2314420 Nov 27 15:41 log.47556161._006074.job.log.tgz.1
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas      8661 Nov 27 15:41 heartbeat.json
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 15:42 boinc_mmap_file
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas        29 Nov 27 15:42 wrapper_checkpoint.txt
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas       820 Nov 27 15:42 pilotlog.txt
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas   9729259 Nov 27 15:42 log.47556161._006074.job.log.1
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas       353 Nov 27 15:42 output.list
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas       620 Nov 27 15:42 runtime_log
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas  12062720 Nov 27 15:42 result.tar.gz
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 15:42 runtime_log.err
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas       667 Nov 27 15:42 6PGLDmqfXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpBNKDmSmJTbm.diag
[2025-11-27 15:42:17] -rw-r--r-- 1 boincer umatlas     21301 Nov 27 15:42 stderr.txt
[2025-11-27 15:42:17] HITS file was successfully produced:
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas 919355401 Nov 27 15:40 shared/HITS.pool.root.1
[2025-11-27 15:42:17]  *** Contents of shared directory: ***
[2025-11-27 15:42:17] total 1306728
[2025-11-27 15:42:17] -rw-r--r-- 2 boincer umatlas 406046546 Nov 26 20:06 ATLAS.root_0
[2025-11-27 15:42:17] -rw-r--r-- 2 boincer umatlas    590106 Nov 26 20:06 input.tar.gz
[2025-11-27 15:42:17] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 20:06 start_atlas.sh
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas 919355401 Nov 27 15:40 HITS.pool.root.1
[2025-11-27 15:42:17] -rw------- 1 boincer umatlas  12062720 Nov 27 15:42 result.tar.gz
15:42:18 (13376): run_atlas exited; CPU time 541934.699147
15:42:18 (13376): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN