Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:01:26 (1736552): wrapper (7.7.26015): starting
22:01:26 (1736552): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 22:01:26] Arguments: --nthreads 8
[2025-11-26 22:01:26] Threads: 8
[2025-11-26 22:01:26] Checking for CVMFS
[2025-11-26 22:01:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:01:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:01:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:01:31] 2.13.2.0 11163 38177 293596 153343 0 364 32163912 40960000 10332 16776704 0 36613030 99.626 32782752 36946 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 22:01:31] CVMFS is ok
[2025-11-26 22:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:01:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:01:31] Further information can be found at the LHC@home message board.
[2025-11-26 22:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:01:31] Checking for apptainer binary...
[2025-11-26 22:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:01:31] Running /usr/bin/apptainer --version
[2025-11-26 22:01:31] apptainer version 1.4.4-1.el9
[2025-11-26 22:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:01:32] c-210-35-1.aglt2.org
[2025-11-26 22:01:32] apptainer works
[2025-11-26 22:01:32] Set ATHENA_PROC_NUMBER=8
[2025-11-26 22:01:32] Set ATHENA_CORE_NUMBER=8
[2025-11-26 22:01:32] Starting ATLAS job with PandaID=6898378678
[2025-11-26 22:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 06:58:17]  *** The last 200 lines of the pilot log: ***
[2025-11-28 06:58:17] 2025-11-28 11:57:23,803 | INFO     | sum of deviations: 9961191168737.328
[2025-11-28 06:58:17] 2025-11-28 11:57:23,803 | INFO     | mean x: 1764271862.0108247
[2025-11-28 06:58:17] 2025-11-28 11:57:23,804 | INFO     | mean y: 2915681.3654639176
[2025-11-28 06:58:17] 2025-11-28 11:57:23,804 | INFO     | intersect: -7758782260.761265
[2025-11-28 06:58:17] 2025-11-28 11:57:23,807 | INFO     | chi2: 12.3496243484271
[2025-11-28 06:58:17] 2025-11-28 11:57:23,810 | INFO     | sum of square deviations: 2246772088947.667
[2025-11-28 06:58:17] 2025-11-28 11:57:23,857 | INFO     | sum of deviations: 10691633152636.455
[2025-11-28 06:58:17] 2025-11-28 11:57:23,857 | INFO     | mean x: 1764271709.5328166
[2025-11-28 06:58:17] 2025-11-28 11:57:23,857 | INFO     | mean y: 2922062.0558139533
[2025-11-28 06:58:17] 2025-11-28 11:57:23,858 | INFO     | intersect: -8392653970.195235
[2025-11-28 06:58:17] 2025-11-28 11:57:23,859 | INFO     | chi2: 8.589576809690637
[2025-11-28 06:58:17] 2025-11-28 11:57:23,859 | INFO     | current chi2=8.589576809690637 (change=30.446655158505763 %)
[2025-11-28 06:58:17] 2025-11-28 11:57:23,860 | INFO     | sum of square deviations: 2229405110579.62
[2025-11-28 06:58:17] 2025-11-28 11:57:23,916 | INFO     | sum of deviations: 10934882175705.988
[2025-11-28 06:58:17] 2025-11-28 11:57:23,916 | INFO     | mean x: 1764271557.0476685
[2025-11-28 06:58:17] 2025-11-28 11:57:23,917 | INFO     | mean y: 2924196.554404145
[2025-11-28 06:58:17] 2025-11-28 11:57:23,917 | INFO     | intersect: -8650550898.983469
[2025-11-28 06:58:17] 2025-11-28 11:57:23,920 | INFO     | chi2: 7.933158319339925
[2025-11-28 06:58:17] 2025-11-28 11:57:23,920 | INFO     | current chi2=7.933158319339925 (change=7.642035281763247 %)
[2025-11-28 06:58:17] 2025-11-28 11:57:23,920 | INFO     | right removable region: 1929
[2025-11-28 06:58:17] 2025-11-28 11:57:23,923 | INFO     | sum of square deviations: 2246762135349.731
[2025-11-28 06:58:17] 2025-11-28 11:57:24,009 | INFO     | sum of deviations: 9172307092236.793
[2025-11-28 06:58:17] 2025-11-28 11:57:24,010 | INFO     | mean x: 1764272014.5322998
[2025-11-28 06:58:17] 2025-11-28 11:57:24,011 | INFO     | mean y: 2922569.5953488373
[2025-11-28 06:58:17] 2025-11-28 11:57:24,011 | INFO     | intersect: -7199639934.428045
[2025-11-28 06:58:17] 2025-11-28 11:57:24,015 | INFO     | chi2: 8.163100533239243
[2025-11-28 06:58:17] 2025-11-28 11:57:24,015 | INFO     | current chi2=8.163100533239243 (change=33.90000940167116 %)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,018 | INFO     | sum of square deviations: 2229386736537.289
[2025-11-28 06:58:17] 2025-11-28 11:57:24,191 | INFO     | sum of deviations: 8597427299987.512
[2025-11-28 06:58:17] 2025-11-28 11:57:24,191 | INFO     | mean x: 1764272167.0544043
[2025-11-28 06:58:17] 2025-11-28 11:57:24,191 | INFO     | mean y: 2927614.6808290156
[2025-11-28 06:58:17] 2025-11-28 11:57:24,191 | INFO     | intersect: -6800827626.6377325
[2025-11-28 06:58:17] 2025-11-28 11:57:24,194 | INFO     | chi2: 6.06533311906526
[2025-11-28 06:58:17] 2025-11-28 11:57:24,195 | INFO     | current chi2=6.06533311906526 (change=25.69816953291346 %)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,197 | INFO     | sum of square deviations: 2212103223360.5386
[2025-11-28 06:58:17] 2025-11-28 11:57:24,239 | INFO     | sum of deviations: 8265330355592.85
[2025-11-28 06:58:17] 2025-11-28 11:57:24,239 | INFO     | mean x: 1764272319.5672727
[2025-11-28 06:58:17] 2025-11-28 11:57:24,239 | INFO     | mean y: 2930543.5184415583
[2025-11-28 06:58:17] 2025-11-28 11:57:24,240 | INFO     | intersect: -6589118780.607922
[2025-11-28 06:58:17] 2025-11-28 11:57:24,241 | INFO     | chi2: 5.380855411498714
[2025-11-28 06:58:17] 2025-11-28 11:57:24,241 | INFO     | current chi2=5.380855411498714 (change=11.285080211258574 %)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,241 | INFO     | left removable region: 30
[2025-11-28 06:58:17] 2025-11-28 11:57:24,243 | INFO     | sum of square deviations: 2123682055927.0208
[2025-11-28 06:58:17] 2025-11-28 11:57:24,291 | INFO     | sum of deviations: 8726147707431.391
[2025-11-28 06:58:17] 2025-11-28 11:57:24,291 | INFO     | mean x: 1764272441.6482358
[2025-11-28 06:58:17] 2025-11-28 11:57:24,291 | INFO     | mean y: 2944051.4870984727
[2025-11-28 06:58:17] 2025-11-28 11:57:24,291 | INFO     | intersect: -7246400020.054177
[2025-11-28 06:58:17] 2025-11-28 11:57:24,293 | INFO     | chi2: 0.6366238736876321
[2025-11-28 06:58:17] 2025-11-28 11:57:24,294 | INFO     | current memory leak: 4.11 B/s (using 1899 data points, chi2=0.64)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,295 | INFO     | could have reported an average CPU frequency of 2696 MHz (68 samples)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,295 | INFO     | ..............................
[2025-11-28 06:58:17] 2025-11-28 11:57:24,295 | INFO     | . Timing measurements:
[2025-11-28 06:58:17] 2025-11-28 11:57:24,296 | INFO     | . get job = 0 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,296 | INFO     | . initial setup = 3 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,296 | INFO     | . payload setup = 44 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,296 | INFO     | . stage-in = 0 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,296 | INFO     | . payload execution = 118351 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,300 | INFO     | . stage-out = 3 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,309 | INFO     | . log creation = 1 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,310 | INFO     | ..............................
[2025-11-28 06:58:17] 2025-11-28 11:57:24,423 | INFO     | 
[2025-11-28 06:58:17] 2025-11-28 11:57:24,423 | INFO     | job summary report
[2025-11-28 06:58:17] 2025-11-28 11:57:24,423 | INFO     | --------------------------------------------------
[2025-11-28 06:58:17] 2025-11-28 11:57:24,423 | INFO     | PanDA job id: 6898378678
[2025-11-28 06:58:17] 2025-11-28 11:57:24,423 | INFO     | task id: 47556161
[2025-11-28 06:58:17] 2025-11-28 11:57:24,423 | INFO     | errors: (none)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | pilot state: finished 
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | transexitcode: 0
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | exeerrorcode: 0
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | exeerrordiag: 
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | exitcode: 0
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | exitmsg: OK
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | cpuconsumptiontime: 244558 s
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | nevents: 1000
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | neventsw: 0
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | pid: 1754800
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | pgrp: 1754800
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | corecount: 8
[2025-11-28 06:58:17] 2025-11-28 11:57:24,424 | INFO     | event service: False
[2025-11-28 06:58:17] 2025-11-28 11:57:24,425 | INFO     | sizes: {0: 2284145, 1: 2284344, 12: 2284344, 23: 2284372, 34: 2284400, 35: 2284690, 45: 2284846, 118399: 2364653, 118404: 2373703, 118411: 2373893}
[2025-11-28 06:58:17] 2025-11-28 11:57:24,425 | INFO     | --------------------------------------------------
[2025-11-28 06:58:17] 2025-11-28 11:57:24,425 | INFO     | 
[2025-11-28 06:58:17] 2025-11-28 11:57:24,425 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-28 06:58:17] 2025-11-28 11:57:24,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 06:58:17] 2025-11-28 11:57:24,454 | INFO     | job 6898378678 has completed (purged errors)
[2025-11-28 06:58:17] 2025-11-28 11:57:24,454 | INFO     | overall cleanup function is called
[2025-11-28 06:58:17] 2025-11-28 11:57:24,655 | INFO     | PID=1747995 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-28 06:58:17] 2025-11-28 11:57:24,655 | INFO     | .. there are 11 such processes running
[2025-11-28 06:58:17] 2025-11-28 11:57:25,475 | INFO     | --- collectZombieJob: --- 10, [1754800]
[2025-11-28 06:58:17] 2025-11-28 11:57:25,475 | INFO     | zombie collector waiting for pid 1754800
[2025-11-28 06:58:17] 2025-11-28 11:57:25,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 06:58:17] 2025-11-28 11:57:25,475 | INFO     | collected zombie processes
[2025-11-28 06:58:17] 2025-11-28 11:57:25,475 | INFO     | will attempt to kill all subprocesses of pid=1754800
[2025-11-28 06:58:17] 2025-11-28 11:57:25,747 | INFO     | process IDs to be killed: [1754800] (in reverse order)
[2025-11-28 06:58:17] 2025-11-28 11:57:25,827 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 06:58:17] 2025-11-28 11:57:25,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 06:58:17] 2025-11-28 11:57:25,853 | INFO     | did not find any defunct processes belonging to 1754800
[2025-11-28 06:58:17] 2025-11-28 11:57:25,878 | INFO     | did not find any defunct processes belonging to 1754800
[2025-11-28 06:58:17] 2025-11-28 11:57:25,882 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 06:58:17] 2025-11-28 11:57:25,882 | INFO     | ready for new job
[2025-11-28 06:58:17] 2025-11-28 11:57:25,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 06:58:17] 2025-11-28 11:57:25,890 | INFO     | ***************************************
[2025-11-28 06:58:17] 2025-11-28 11:57:25,890 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 06:58:17] 2025-11-28 11:57:25,890 | INFO     | ***************************************
[2025-11-28 06:58:17] 2025-11-28 11:57:25,891 | INFO     | 
[2025-11-28 06:58:17] 2025-11-28 11:57:25,893 | INFO     | architecture information:
[2025-11-28 06:58:17] 2025-11-28 11:57:25,894 | INFO     | executing command: cat /etc/os-release
[2025-11-28 06:58:17] 2025-11-28 11:57:25,911 | INFO     | cat /etc/os-release:
[2025-11-28 06:58:17] NAME="CentOS Linux"
[2025-11-28 06:58:17] VERSION="7 (Core)"
[2025-11-28 06:58:17] ID="centos"
[2025-11-28 06:58:17] ID_LIKE="rhel fedora"
[2025-11-28 06:58:17] VERSION_ID="7"
[2025-11-28 06:58:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 06:58:17] ANSI_COLOR="0;31"
[2025-11-28 06:58:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 06:58:17] HOME_URL="https://www.centos.org/"
[2025-11-28 06:58:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 06:58:17] 
[2025-11-28 06:58:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 06:58:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 06:58:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 06:58:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 06:58:17] 
[2025-11-28 06:58:17] 2025-11-28 11:57:25,911 | INFO     | ***************************************
[2025-11-28 06:58:17] 2025-11-28 11:57:26,415 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-28 06:58:17] 2025-11-28 11:57:26,524 | INFO     | sufficient remaining disk space (71140638720 B)
[2025-11-28 06:58:17] 2025-11-28 11:57:26,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 06:58:17] 2025-11-28 11:57:26,525 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 06:58:17] 2025-11-28 11:57:26,525 | INFO     | update_server=False
[2025-11-28 06:58:17] 2025-11-28 11:57:26,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 06:58:17] 2025-11-28 11:57:26,837 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 06:58:17] 2025-11-28 11:57:26,837 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 06:58:17] 2025-11-28 11:57:26,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:58:17] 2025-11-28 11:57:26,837 | INFO     | will abort loop
[2025-11-28 06:58:17] 2025-11-28 11:57:26,862 | INFO     | all data control threads have been joined
[2025-11-28 06:58:17] 2025-11-28 11:57:27,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 06:58:17] 2025-11-28 11:57:27,416 | INFO     | all payload control threads have been joined
[2025-11-28 06:58:17] 2025-11-28 11:57:27,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 06:58:17] 2025-11-28 11:57:27,530 | INFO     | [job] retrieve thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:27,682 | INFO     | [payload] validate_post thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:27,683 | INFO     | all job control threads have been joined
[2025-11-28 06:58:17] 2025-11-28 11:57:27,850 | INFO     | [payload] failed_post thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:27,851 | INFO     | [job] job monitor thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:27,892 | INFO     | [data] control thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,161 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,249 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,421 | INFO     | [payload] control thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,615 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,627 | INFO     | [job] validate thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,634 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,726 | INFO     | [job] control thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:28,947 | INFO     | [data] copytool_in thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:29,394 | INFO     | [data] copytool_out thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:29,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:58:17] 2025-11-28 11:57:30,444 | INFO     | [job] queue monitor thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:31,502 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 06:58:17] 2025-11-28 11:57:57,211 | INFO     | PID=1747995 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 06:58:17] 2025-11-28 11:57:57,211 | INFO     | .. there are 11 such processes running
[2025-11-28 06:58:17] 2025-11-28 11:57:57,212 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 06:58:17] 2025-11-28 11:57:57,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 06:58:17] 2025-11-28 11:57:57,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 06:58:17] 2025-11-28 11:58:11,733 | INFO     | [monitor] cgroup control has ended
[2025-11-28 06:58:17] 2025-11-28 11:58:12,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082586105664)>', '<ExcThread(monitor, started 140081935398656)>']
[2025-11-28 06:58:17] 2025-11-28 11:58:13,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 06:58:17] 2025-11-28 11:58:13,309 | INFO     | [monitor] control thread has ended
[2025-11-28 06:58:17] 2025-11-28 11:58:17,371 | INFO     | all workflow threads have been joined
[2025-11-28 06:58:17] 2025-11-28 11:58:17,372 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 06:58:17] 2025-11-28 11:58:17,372 | INFO     | traces error code: 0
[2025-11-28 06:58:17] 2025-11-28 11:58:17,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 06:58:17] 2025-11-28 11:58:17,513 [wrapper] ==== pilot stdout END ====
[2025-11-28 06:58:17] 2025-11-28 11:58:17,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 06:58:17] 2025-11-28 11:58:17,519 [wrapper] pilotpid: 1747995
[2025-11-28 06:58:17] 2025-11-28 11:58:17,521 [wrapper] Pilot exit status: 0
[2025-11-28 06:58:17] 2025-11-28 11:58:17,534 [wrapper] pandaids: 6898378678
[2025-11-28 06:58:17] 2025-11-28 11:58:17,585 [wrapper] cleanup supervisor_pilot  638337 1747996
[2025-11-28 06:58:17] 2025-11-28 11:58:17,589 [wrapper] Test setup, not cleaning
[2025-11-28 06:58:17] 2025-11-28 11:58:17,591 [wrapper] apfmon messages muted
[2025-11-28 06:58:17] 2025-11-28 11:58:17,594 [wrapper] ==== wrapper stdout END ====
[2025-11-28 06:58:17] 2025-11-28 11:58:17,597 [wrapper] ==== wrapper stderr END ====
[2025-11-28 06:58:17]  *** Error codes and diagnostics ***
[2025-11-28 06:58:17]     "exeErrorCode": 0,
[2025-11-28 06:58:17]     "exeErrorDiag": "",
[2025-11-28 06:58:17]     "pilotErrorCode": 0,
[2025-11-28 06:58:17]     "pilotErrorDiag": "",
[2025-11-28 06:58:17]  *** Listing of results directory ***
[2025-11-28 06:58:17] total 1340788
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:35 queuedata.json
[2025-11-28 06:58:17] -rwx------. 1 boincer umatlas     36292 Nov 26 11:35 runpilot2-wrapper.sh
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas       100 Nov 26 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 06:58:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 22:01 run_atlas
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas       105 Nov 26 22:01 job.xml
[2025-11-28 06:58:17] -rw-r--r--. 2 boincer umatlas 409699576 Nov 26 22:01 EVNT.47483658._002621.pool.root.1
[2025-11-28 06:58:17] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 22:01 input.tar.gz
[2025-11-28 06:58:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:01 start_atlas.sh
[2025-11-28 06:58:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 22:01 shared
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas         0 Nov 26 22:01 boinc_lockfile
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas      2787 Nov 26 22:01 pandaJob.out
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas        57 Nov 26 22:01 setup.sh.local
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas    991554 Nov 26 22:02 agis_schedconf.cvmfs.json
[2025-11-28 06:58:17] drwx------. 5 boincer umatlas      4096 Nov 26 22:02 pilot3
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas       533 Nov 28 06:45 boinc_task_state.xml
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas      6844 Nov 28 06:54 init_data.xml
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas 924213730 Nov 28 06:56 HITS.47556161._006032.pool.root.1
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas      1059 Nov 28 06:57 memory_monitor_summary.json
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas   1516240 Nov 28 06:57 agis_ddmendpoints.agis.ALL.json
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas   2804955 Nov 28 06:57 log.47556161._006032.job.log.tgz.1
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas      8625 Nov 28 06:57 heartbeat.json
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas        95 Nov 28 06:57 pilot_heartbeat.json
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 06:58 boinc_mmap_file
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas        29 Nov 28 06:58 wrapper_checkpoint.txt
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas      5010 Nov 28 06:58 pilotlog.txt
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas  14762001 Nov 28 06:58 log.47556161._006032.job.log.1
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas       353 Nov 28 06:58 output.list
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas       620 Nov 28 06:58 runtime_log
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas  17582080 Nov 28 06:58 result.tar.gz
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas      9354 Nov 28 06:58 runtime_log.err
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas       665 Nov 28 06:58 MsENDmpfXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIBNKDmQKq25m.diag
[2025-11-28 06:58:17] -rw-r--r--. 1 boincer umatlas     21311 Nov 28 06:58 stderr.txt
[2025-11-28 06:58:17] HITS file was successfully produced:
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas 924213730 Nov 28 06:56 shared/HITS.pool.root.1
[2025-11-28 06:58:17]  *** Contents of shared directory: ***
[2025-11-28 06:58:17] total 1320428
[2025-11-28 06:58:17] -rw-r--r--. 2 boincer umatlas 409699576 Nov 26 22:01 ATLAS.root_0
[2025-11-28 06:58:17] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 22:01 input.tar.gz
[2025-11-28 06:58:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 22:01 start_atlas.sh
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas 924213730 Nov 28 06:56 HITS.pool.root.1
[2025-11-28 06:58:17] -rw-------. 1 boincer umatlas  17582080 Nov 28 06:58 result.tar.gz
06:58:19 (1736552): run_atlas exited; CPU time 246278.548564
06:58:19 (1736552): called boinc_finish(0)

</stderr_txt>
]]>

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