Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:21:31 (3531214): wrapper (7.7.26015): starting
23:21:31 (3531214): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:21:31] Arguments: --nthreads 8
[2025-11-26 23:21:31] Threads: 8
[2025-11-26 23:21:31] Checking for CVMFS
[2025-11-26 23:21:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:21:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:21:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:21:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:21:34] 2.13.3.0 15551 29302 320056 153347 2 69 18484973 32935936 29071 16776704 0 57671189 99.569 67161510 39586 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 23:21:34] CVMFS is ok
[2025-11-26 23:21:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 23:21:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 23:21:34] Further information can be found at the LHC@home message board.
[2025-11-26 23:21:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:21:34] Checking for apptainer binary...
[2025-11-26 23:21:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:21:34] Running /usr/bin/apptainer --version
[2025-11-26 23:21:34] apptainer version 1.4.4-1.el9
[2025-11-26 23:21:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:21:35] c6-5-7-3.aglt2.org
[2025-11-26 23:21:35] apptainer works
[2025-11-26 23:21:35] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:21:35] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:21:35] Starting ATLAS job with PandaID=6897999825
[2025-11-26 23:21:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:49:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:49:56] 2025-11-28 00:49:04,413 | INFO     | time since job start (73582s) is within the limit (172800.0s)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,096 | INFO     | monitor loop #4790: job 0:6897999825 is in state 'finished'
[2025-11-27 19:49:56] 2025-11-28 00:49:05,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,254 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 19:49:56] 2025-11-28 00:49:05,270 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3037.2089464285714
[2025-11-27 19:49:56] 2025-11-28 00:49:05,280 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6897999825/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,281 | INFO     | extracted standard info from prmon json
[2025-11-27 19:49:56] 2025-11-28 00:49:05,281 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:49:56] 2025-11-28 00:49:05,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:49:56] 2025-11-28 00:49:05,327 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:49:56] 2025-11-28 00:49:05,329 | INFO     | sum of square deviations: 541177683343.80725
[2025-11-27 19:49:56] 2025-11-28 00:49:05,393 | INFO     | sum of deviations: 3791907302697.4907
[2025-11-27 19:49:56] 2025-11-28 00:49:05,393 | INFO     | mean x: 1764254195.8770764
[2025-11-27 19:49:56] 2025-11-28 00:49:05,393 | INFO     | mean y: 2928761.503322259
[2025-11-27 19:49:56] 2025-11-28 00:49:05,393 | INFO     | intersect: -12358793783.716497
[2025-11-27 19:49:56] 2025-11-28 00:49:05,411 | INFO     | chi2: 11.120828379876903
[2025-11-27 19:49:56] 2025-11-28 00:49:05,412 | INFO     | sum of square deviations: 534463625919.2862
[2025-11-27 19:49:56] 2025-11-28 00:49:05,539 | INFO     | sum of deviations: 4242146915387.944
[2025-11-27 19:49:56] 2025-11-28 00:49:05,539 | INFO     | mean x: 1764254043.382819
[2025-11-27 19:49:56] 2025-11-28 00:49:05,539 | INFO     | mean y: 2938988.0458715595
[2025-11-27 19:49:56] 2025-11-28 00:49:05,539 | INFO     | intersect: -14000305545.619339
[2025-11-27 19:49:56] 2025-11-28 00:49:05,561 | INFO     | chi2: 7.402360615827684
[2025-11-27 19:49:56] 2025-11-28 00:49:05,561 | INFO     | current chi2=7.402360615827684 (change=33.43696743650655 %)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,562 | INFO     | sum of square deviations: 527805264088.96094
[2025-11-27 19:49:56] 2025-11-28 00:49:05,654 | INFO     | sum of deviations: 4477182554633.007
[2025-11-27 19:49:56] 2025-11-28 00:49:05,654 | INFO     | mean x: 1764253890.887772
[2025-11-27 19:49:56] 2025-11-28 00:49:05,654 | INFO     | mean y: 2944365.171691792
[2025-11-27 19:49:56] 2025-11-28 00:49:05,654 | INFO     | intersect: -14962587962.097387
[2025-11-27 19:49:56] 2025-11-28 00:49:05,656 | INFO     | chi2: 5.9669172164927815
[2025-11-27 19:49:56] 2025-11-28 00:49:05,656 | INFO     | current chi2=5.9669172164927815 (change=19.391697781727167 %)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,656 | INFO     | right removable region: 1193
[2025-11-27 19:49:56] 2025-11-28 00:49:05,668 | INFO     | sum of square deviations: 534462614539.2861
[2025-11-27 19:49:56] 2025-11-28 00:49:05,743 | INFO     | sum of deviations: 3326463030093.861
[2025-11-27 19:49:56] 2025-11-28 00:49:05,744 | INFO     | mean x: 1764254348.382819
[2025-11-27 19:49:56] 2025-11-28 00:49:05,744 | INFO     | mean y: 2939330.4011676395
[2025-11-27 19:49:56] 2025-11-28 00:49:05,744 | INFO     | intersect: -10977673168.822382
[2025-11-27 19:49:56] 2025-11-28 00:49:05,745 | INFO     | chi2: 7.423890758975548
[2025-11-27 19:49:56] 2025-11-28 00:49:05,745 | INFO     | current chi2=7.423890758975548 (change=33.24336546359217 %)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,755 | INFO     | sum of square deviations: 527803314222.18536
[2025-11-27 19:49:56] 2025-11-28 00:49:05,832 | INFO     | sum of deviations: 2998988307117.082
[2025-11-27 19:49:56] 2025-11-28 00:49:05,832 | INFO     | mean x: 1764254500.8886096
[2025-11-27 19:49:56] 2025-11-28 00:49:05,832 | INFO     | mean y: 2946826.579564489
[2025-11-27 19:49:56] 2025-11-28 00:49:05,833 | INFO     | intersect: -10021580258.364658
[2025-11-27 19:49:56] 2025-11-28 00:49:05,834 | INFO     | chi2: 5.705744311554434
[2025-11-27 19:49:56] 2025-11-28 00:49:05,834 | INFO     | current chi2=5.705744311554434 (change=23.14347696110507 %)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,834 | INFO     | left removable region: 20
[2025-11-27 19:49:56] 2025-11-28 00:49:05,835 | INFO     | sum of square deviations: 500441161609.67944
[2025-11-27 19:49:56] 2025-11-28 00:49:05,915 | INFO     | sum of deviations: 3545907061185.7783
[2025-11-27 19:49:56] 2025-11-28 00:49:05,915 | INFO     | mean x: 1764254470.400682
[2025-11-27 19:49:56] 2025-11-28 00:49:05,916 | INFO     | mean y: 2967042.779198636
[2025-11-27 19:49:56] 2025-11-28 00:49:05,916 | INFO     | intersect: -12497768037.045527
[2025-11-27 19:49:56] 2025-11-28 00:49:05,926 | INFO     | chi2: 0.3574748356791146
[2025-11-27 19:49:56] 2025-11-28 00:49:05,926 | INFO     | current memory leak: 7.09 B/s (using 1173 data points, chi2=0.36)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | could have reported an average CPU frequency of 3051 MHz (44 samples)
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | ..............................
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . Timing measurements:
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . get job = 0 s
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . initial setup = 5 s
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . payload setup = 41 s
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . stage-in = 0 s
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . payload execution = 73447 s
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . stage-out = 6 s
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | . log creation = 1 s
[2025-11-27 19:49:56] 2025-11-28 00:49:05,928 | INFO     | ..............................
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | 
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | job summary report
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | --------------------------------------------------
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | PanDA job id: 6897999825
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | task id: 47556161
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | errors: (none)
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | pilot state: finished 
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | transexitcode: 0
[2025-11-27 19:49:56] 2025-11-28 00:49:06,191 | INFO     | exeerrorcode: 0
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | exeerrordiag: 
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | exitcode: 0
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | exitmsg: OK
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | cpuconsumptiontime: 228650 s
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | nevents: 1000
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | neventsw: 0
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | pid: 3543635
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | pgrp: 3543635
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | corecount: 8
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | event service: False
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284292, 13: 2284320, 24: 2284376, 32: 2284666, 35: 2284822, 73493: 2345104, 73494: 2345103, 73501: 2354153, 73505: 2354209, 735
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | --------------------------------------------------
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | 
[2025-11-27 19:49:56] 2025-11-28 00:49:06,192 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 19:49:56] 2025-11-28 00:49:06,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,231 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | job 6897999825 has completed (purged errors)
[2025-11-27 19:49:56] 2025-11-28 00:49:06,232 | INFO     | overall cleanup function is called
[2025-11-27 19:49:56] 2025-11-28 00:49:07,279 | INFO     | --- collectZombieJob: --- 10, [3543635]
[2025-11-27 19:49:56] 2025-11-28 00:49:07,279 | INFO     | zombie collector waiting for pid 3543635
[2025-11-27 19:49:56] 2025-11-28 00:49:07,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:49:56] 2025-11-28 00:49:07,279 | INFO     | collected zombie processes
[2025-11-27 19:49:56] 2025-11-28 00:49:07,279 | INFO     | will attempt to kill all subprocesses of pid=3543635
[2025-11-27 19:49:56] 2025-11-28 00:49:08,432 | INFO     | process IDs to be killed: [3543635] (in reverse order)
[2025-11-27 19:49:56] 2025-11-28 00:49:08,649 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:49:56] 2025-11-28 00:49:08,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:49:56] 2025-11-28 00:49:08,682 | INFO     | did not find any defunct processes belonging to 3543635
[2025-11-27 19:49:56] 2025-11-28 00:49:08,717 | INFO     | did not find any defunct processes belonging to 3543635
[2025-11-27 19:49:56] 2025-11-28 00:49:08,718 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:49:56] 2025-11-28 00:49:08,719 | INFO     | ready for new job
[2025-11-27 19:49:56] 2025-11-28 00:49:08,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:49:56] 2025-11-28 00:49:08,732 | INFO     | ***************************************
[2025-11-27 19:49:56] 2025-11-28 00:49:08,732 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:49:56] 2025-11-28 00:49:08,733 | INFO     | ***************************************
[2025-11-27 19:49:56] 2025-11-28 00:49:08,733 | INFO     | 
[2025-11-27 19:49:56] 2025-11-28 00:49:08,736 | INFO     | architecture information:
[2025-11-27 19:49:56] 2025-11-28 00:49:08,740 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:49:56] 2025-11-28 00:49:08,790 | INFO     | cat /etc/os-release:
[2025-11-27 19:49:56] NAME="CentOS Linux"
[2025-11-27 19:49:56] VERSION="7 (Core)"
[2025-11-27 19:49:56] ID="centos"
[2025-11-27 19:49:56] ID_LIKE="rhel fedora"
[2025-11-27 19:49:56] VERSION_ID="7"
[2025-11-27 19:49:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:49:56] ANSI_COLOR="0;31"
[2025-11-27 19:49:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:49:56] HOME_URL="https://www.centos.org/"
[2025-11-27 19:49:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:49:56] 
[2025-11-27 19:49:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:49:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:49:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:49:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:49:56] 
[2025-11-27 19:49:56] 2025-11-28 00:49:08,790 | INFO     | ***************************************
[2025-11-27 19:49:56] 2025-11-28 00:49:09,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 19:49:56] 2025-11-28 00:49:09,362 | INFO     | sufficient remaining disk space (71821164544 B)
[2025-11-27 19:49:56] 2025-11-28 00:49:09,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:49:56] 2025-11-28 00:49:09,363 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:49:56] 2025-11-28 00:49:09,363 | INFO     | update_server=False
[2025-11-27 19:49:56] 2025-11-28 00:49:09,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:49:56] 2025-11-28 00:49:09,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:49:56] 2025-11-28 00:49:09,365 | INFO     | aborting loop
[2025-11-27 19:49:56] 2025-11-28 00:49:09,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:49:56] 2025-11-28 00:49:09,578 | INFO     | all job control threads have been joined
[2025-11-27 19:49:56] 2025-11-28 00:49:09,924 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:49:56] 2025-11-28 00:49:10,145 | INFO     | all payload control threads have been joined
[2025-11-27 19:49:56] 2025-11-28 00:49:10,206 | INFO     | all data control threads have been joined
[2025-11-27 19:49:56] 2025-11-28 00:49:10,369 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:10,371 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:10,463 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:10,470 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:10,577 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:10,584 | INFO     | [job] control thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:10,794 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:10,963 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:11,150 | INFO     | [payload] control thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:11,169 | INFO     | [job] validate thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:11,211 | INFO     | [data] control thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:11,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:49:56] 2025-11-28 00:49:11,483 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:11,675 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:11,696 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:12,216 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:13,942 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:49:56] 2025-11-28 00:49:38,425 | INFO     | PID=3535752 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:49:56] 2025-11-28 00:49:38,425 | INFO     | .. there are 39 such processes running
[2025-11-27 19:49:56] 2025-11-28 00:49:38,430 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:49:56] 2025-11-28 00:49:38,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:49:56] 2025-11-28 00:49:38,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:49:56] 2025-11-28 00:49:50,050 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:49:56] 2025-11-28 00:49:50,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886921246528)>', '<ExcThread(monitor, started 139886346630912)>']
[2025-11-27 19:49:56] 2025-11-28 00:49:50,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:49:56] 2025-11-28 00:49:50,502 | INFO     | [monitor] control thread has ended
[2025-11-27 19:49:56] 2025-11-28 00:49:55,447 | INFO     | all workflow threads have been joined
[2025-11-27 19:49:56] 2025-11-28 00:49:55,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:49:56] 2025-11-28 00:49:55,447 | INFO     | traces error code: 0
[2025-11-27 19:49:56] 2025-11-28 00:49:55,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:49:56] 2025-11-28 00:49:55,707 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:49:56] 2025-11-28 00:49:55,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:49:56] 2025-11-28 00:49:55,766 [wrapper] pilotpid: 3535752
[2025-11-27 19:49:56] 2025-11-28 00:49:55,779 [wrapper] Pilot exit status: 0
[2025-11-27 19:49:56] 2025-11-28 00:49:55,833 [wrapper] pandaids: 6897999825
[2025-11-27 19:49:56] 2025-11-28 00:49:55,941 [wrapper] cleanup supervisor_pilot 3596156 3535753
[2025-11-27 19:49:56] 2025-11-28 00:49:55,944 [wrapper] Test setup, not cleaning
[2025-11-27 19:49:56] 2025-11-28 00:49:55,953 [wrapper] apfmon messages muted
[2025-11-27 19:49:56] 2025-11-28 00:49:55,970 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:49:56] 2025-11-28 00:49:55,983 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:49:56]  *** Error codes and diagnostics ***
[2025-11-27 19:49:56]     "exeErrorCode": 0,
[2025-11-27 19:49:56]     "exeErrorDiag": "",
[2025-11-27 19:49:56]     "pilotErrorCode": 0,
[2025-11-27 19:49:56]     "pilotErrorDiag": "",
[2025-11-27 19:49:56]  *** Listing of results directory ***
[2025-11-27 19:49:56] total 1333792
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:41 queuedata.json
[2025-11-27 19:49:56] -rwx------. 1 boincer umatlas     36292 Nov 25 21:44 runpilot2-wrapper.sh
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas       100 Nov 26 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:49:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 23:21 run_atlas
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas       105 Nov 26 23:21 job.xml
[2025-11-27 19:49:56] -rw-r--r--. 2 boincer umatlas 409022683 Nov 26 23:21 EVNT.47483658._002387.pool.root.1
[2025-11-27 19:49:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:21 start_atlas.sh
[2025-11-27 19:49:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 23:21 shared
[2025-11-27 19:49:56] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 23:21 input.tar.gz
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas         0 Nov 26 23:21 boinc_lockfile
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 23:21 pandaJob.out
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas        57 Nov 26 23:21 setup.sh.local
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas    991570 Nov 26 23:22 agis_schedconf.cvmfs.json
[2025-11-27 19:49:56] drwx------. 5 boincer umatlas      4096 Nov 26 23:22 pilot3
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:37 boinc_task_state.xml
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 19:46 init_data.xml
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas 928683184 Nov 27 19:48 HITS.47556161._003693.pool.root.1
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas      1058 Nov 27 19:48 memory_monitor_summary.json
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:48 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas   2319223 Nov 27 19:48 log.47556161._003693.job.log.tgz.1
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas      8628 Nov 27 19:49 heartbeat.json
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas        95 Nov 27 19:49 pilot_heartbeat.json
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas      4824 Nov 27 19:49 pilotlog.txt
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas   9766881 Nov 27 19:49 log.47556161._003693.job.log.1
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:49 wrapper_checkpoint.txt
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas       353 Nov 27 19:49 output.list
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:49 runtime_log
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas  12103680 Nov 27 19:49 result.tar.gz
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas       660 Nov 27 19:49 u7aKDmnhKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqnJKDmAIw3Tm.diag
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 19:49 runtime_log.err
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:49 boinc_mmap_file
[2025-11-27 19:49:56] -rw-r--r--. 1 boincer umatlas     21385 Nov 27 19:49 stderr.txt
[2025-11-27 19:49:56] HITS file was successfully produced:
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas 928683184 Nov 27 19:48 shared/HITS.pool.root.1
[2025-11-27 19:49:56]  *** Contents of shared directory: ***
[2025-11-27 19:49:56] total 1318784
[2025-11-27 19:49:56] -rw-r--r--. 2 boincer umatlas 409022683 Nov 26 23:21 ATLAS.root_0
[2025-11-27 19:49:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 23:21 start_atlas.sh
[2025-11-27 19:49:56] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 23:21 input.tar.gz
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas 928683184 Nov 27 19:48 HITS.pool.root.1
[2025-11-27 19:49:56] -rw-------. 1 boincer umatlas  12103680 Nov 27 19:49 result.tar.gz
19:50:18 (3531214): run_atlas exited; CPU time 230876.599717
19:50:18 (3531214): called boinc_finish(0)

</stderr_txt>
]]>

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