Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:23 (2334588): wrapper (7.7.26015): starting
00:04:23 (2334588): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:04:23] Arguments: --nthreads 9
[2025-11-27 00:04:23] Threads: 9
[2025-11-27 00:04:23] Checking for CVMFS
[2025-11-27 00:04:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:04:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:04:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:04:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:04:24] 2.13.3.0 12497 30911 246312 153347 1 545 27403172 32935936 47929 16776704 0 165464711 99.505 206059386 37123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:04:24] CVMFS is ok
[2025-11-27 00:04:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:04:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:04:24] Further information can be found at the LHC@home message board.
[2025-11-27 00:04:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:04:24] Checking for apptainer binary...
[2025-11-27 00:04:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:04:24] Running /usr/bin/apptainer --version
[2025-11-27 00:04:24] apptainer version 1.4.4-1.el9
[2025-11-27 00:04:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:04:25] c7-7-35.aglt2.org
[2025-11-27 00:04:25] apptainer works
[2025-11-27 00:04:25] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:04:25] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:04:25] Starting ATLAS job with PandaID=6896713654
[2025-11-27 00:04:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:56:13]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:56:13] 2025-11-27 17:55:31,639 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:56:13] 2025-11-27 17:55:31,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:56:13] 2025-11-27 17:55:31,650 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:56:13] 2025-11-27 17:55:31,651 | INFO     | sum of square deviations: 135052036031.55661
[2025-11-27 12:56:13] 2025-11-27 17:55:31,663 | INFO     | sum of deviations: 850564889481.7966
[2025-11-27 12:56:13] 2025-11-27 17:55:31,663 | INFO     | mean x: 1764243011.105541
[2025-11-27 12:56:13] 2025-11-27 17:55:31,663 | INFO     | mean y: 3018317.715039578
[2025-11-27 12:56:13] 2025-11-27 17:55:31,663 | INFO     | intersect: -11108277786.028126
[2025-11-27 12:56:13] 2025-11-27 17:55:31,664 | INFO     | chi2: 11.924817676686422
[2025-11-27 12:56:13] 2025-11-27 17:55:31,665 | INFO     | sum of square deviations: 132397326247.2112
[2025-11-27 12:56:13] 2025-11-27 17:55:31,676 | INFO     | sum of deviations: 1133515797932.0537
[2025-11-27 12:56:13] 2025-11-27 17:55:31,677 | INFO     | mean x: 1764242858.6095617
[2025-11-27 12:56:13] 2025-11-27 17:55:31,677 | INFO     | mean y: 3034572.7144754315
[2025-11-27 12:56:13] 2025-11-27 17:55:31,677 | INFO     | intersect: -15101478549.315948
[2025-11-27 12:56:13] 2025-11-27 17:55:31,678 | INFO     | chi2: 8.286081811693105
[2025-11-27 12:56:13] 2025-11-27 17:55:31,678 | INFO     | current chi2=8.286081811693105 (change=30.513974835080422 %)
[2025-11-27 12:56:13] 2025-11-27 17:55:31,678 | INFO     | sum of square deviations: 129777640375.34074
[2025-11-27 12:56:13] 2025-11-27 17:55:31,691 | INFO     | sum of deviations: 1413221892284.0461
[2025-11-27 12:56:13] 2025-11-27 17:55:31,691 | INFO     | mean x: 1764242706.1136363
[2025-11-27 12:56:13] 2025-11-27 17:55:31,691 | INFO     | mean y: 3050846.1524064173
[2025-11-27 12:56:13] 2025-11-27 17:55:31,691 | INFO     | intersect: -19208782628.175343
[2025-11-27 12:56:13] 2025-11-27 17:55:31,692 | INFO     | chi2: 4.7347130987538035
[2025-11-27 12:56:13] 2025-11-27 17:55:31,692 | INFO     | current chi2=4.7347130987538035 (change=42.85944543689759 %)
[2025-11-27 12:56:13] 2025-11-27 17:55:31,693 | INFO     | sum of square deviations: 127192745853.44553
[2025-11-27 12:56:13] 2025-11-27 17:55:31,703 | INFO     | sum of deviations: 1531374837052.0627
[2025-11-27 12:56:13] 2025-11-27 17:55:31,704 | INFO     | mean x: 1764242553.617766
[2025-11-27 12:56:13] 2025-11-27 17:55:31,704 | INFO     | mean y: 3057814.267833109
[2025-11-27 12:56:13] 2025-11-27 17:55:31,704 | INFO     | intersect: -21238064349.88218
[2025-11-27 12:56:13] 2025-11-27 17:55:31,705 | INFO     | chi2: 3.9732092557198544
[2025-11-27 12:56:13] 2025-11-27 17:55:31,705 | INFO     | current chi2=3.9732092557198544 (change=16.08342104687146 %)
[2025-11-27 12:56:13] 2025-11-27 17:55:31,705 | INFO     | right removable region: 742
[2025-11-27 12:56:13] 2025-11-27 17:55:31,706 | INFO     | sum of square deviations: 132397046257.21121
[2025-11-27 12:56:13] 2025-11-27 17:55:31,719 | INFO     | sum of deviations: 564575591923.1825
[2025-11-27 12:56:13] 2025-11-27 17:55:31,719 | INFO     | mean x: 1764243163.6095617
[2025-11-27 12:56:13] 2025-11-27 17:55:31,719 | INFO     | mean y: 3034737.9189907038
[2025-11-27 12:56:13] 2025-11-27 17:55:31,719 | INFO     | intersect: -7520158992.9762335
[2025-11-27 12:56:13] 2025-11-27 17:55:31,720 | INFO     | chi2: 8.624976609002958
[2025-11-27 12:56:13] 2025-11-27 17:55:31,720 | INFO     | current chi2=8.624976609002958 (change=27.67204629161591 %)
[2025-11-27 12:56:13] 2025-11-27 17:55:31,721 | INFO     | sum of square deviations: 129777080395.34079
[2025-11-27 12:56:13] 2025-11-27 17:55:31,732 | INFO     | sum of deviations: 472105892664.31836
[2025-11-27 12:56:13] 2025-11-27 17:55:31,732 | INFO     | mean x: 1764243316.1136363
[2025-11-27 12:56:13] 2025-11-27 17:55:31,732 | INFO     | mean y: 3040111.6550802137
[2025-11-27 12:56:13] 2025-11-27 17:55:31,732 | INFO     | intersect: -6414962690.4852295
[2025-11-27 12:56:13] 2025-11-27 17:55:31,733 | INFO     | chi2: 8.250616293684098
[2025-11-27 12:56:13] 2025-11-27 17:55:31,733 | INFO     | current chi2=8.250616293684098 (change=4.340421224193163 %)
[2025-11-27 12:56:13] 2025-11-27 17:55:31,733 | INFO     | left removable region: 20
[2025-11-27 12:56:13] 2025-11-27 17:55:31,733 | INFO     | sum of square deviations: 116709742583.23546
[2025-11-27 12:56:13] 2025-11-27 17:55:31,743 | INFO     | sum of deviations: 1050856633100.0135
[2025-11-27 12:56:13] 2025-11-27 17:55:31,743 | INFO     | mean x: 1764243133.132964
[2025-11-27 12:56:13] 2025-11-27 17:55:31,743 | INFO     | mean y: 3086437.801939058
[2025-11-27 12:56:13] 2025-11-27 17:55:31,743 | INFO     | intersect: -15882190642.05887
[2025-11-27 12:56:13] 2025-11-27 17:55:31,744 | INFO     | chi2: 0.12989666731047647
[2025-11-27 12:56:13] 2025-11-27 17:55:31,744 | INFO     | current memory leak: 9.00 B/s (using 722 data points, chi2=0.13)
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | could have reported an average CPU frequency of 3140 MHz (29 samples)
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | ..............................
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . Timing measurements:
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . get job = 0 s
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . initial setup = 2 s
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . payload setup = 11 s
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . stage-in = 0 s
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . payload execution = 46190 s
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . stage-out = 5 s
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | . log creation = 1 s
[2025-11-27 12:56:13] 2025-11-27 17:55:31,745 | INFO     | ..............................
[2025-11-27 12:56:13] 2025-11-27 17:55:32,017 | INFO     | 
[2025-11-27 12:56:13] 2025-11-27 17:55:32,017 | INFO     | job summary report
[2025-11-27 12:56:13] 2025-11-27 17:55:32,017 | INFO     | --------------------------------------------------
[2025-11-27 12:56:13] 2025-11-27 17:55:32,017 | INFO     | PanDA job id: 6896713654
[2025-11-27 12:56:13] 2025-11-27 17:55:32,017 | INFO     | task id: 47556161
[2025-11-27 12:56:13] 2025-11-27 17:55:32,017 | INFO     | errors: (none)
[2025-11-27 12:56:13] 2025-11-27 17:55:32,017 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | pilot state: finished 
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | transexitcode: 0
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | exeerrorcode: 0
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | exeerrordiag: 
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | exitcode: 0
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | exitmsg: OK
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | cpuconsumptiontime: 194686 s
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | nevents: 1000
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | neventsw: 0
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | pid: 2347373
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | pgrp: 2347373
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | corecount: 9
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | event service: False
[2025-11-27 12:56:13] 2025-11-27 17:55:32,018 | INFO     | sizes: {0: 2284262, 8: 2284524, 11: 2284552, 46206: 2330818, 46211: 2339812, 46212: 2339868, 46229: 2340242}
[2025-11-27 12:56:13] 2025-11-27 17:55:32,019 | INFO     | --------------------------------------------------
[2025-11-27 12:56:13] 2025-11-27 17:55:32,019 | INFO     | 
[2025-11-27 12:56:13] 2025-11-27 17:55:32,019 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 12:56:13] 2025-11-27 17:55:32,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,066 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:56:13] 2025-11-27 17:55:32,067 | INFO     | job 6896713654 has completed (purged errors)
[2025-11-27 12:56:13] 2025-11-27 17:55:32,068 | INFO     | overall cleanup function is called
[2025-11-27 12:56:13] 2025-11-27 17:55:33,103 | INFO     | --- collectZombieJob: --- 10, [2347373]
[2025-11-27 12:56:13] 2025-11-27 17:55:33,103 | INFO     | zombie collector waiting for pid 2347373
[2025-11-27 12:56:13] 2025-11-27 17:55:33,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:56:13] 2025-11-27 17:55:33,103 | INFO     | collected zombie processes
[2025-11-27 12:56:13] 2025-11-27 17:55:33,103 | INFO     | will attempt to kill all subprocesses of pid=2347373
[2025-11-27 12:56:13] 2025-11-27 17:55:34,014 | INFO     | process IDs to be killed: [2347373] (in reverse order)
[2025-11-27 12:56:13] 2025-11-27 17:55:34,452 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:56:13] 2025-11-27 17:55:34,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:56:13] 2025-11-27 17:55:34,479 | INFO     | did not find any defunct processes belonging to 2347373
[2025-11-27 12:56:13] 2025-11-27 17:55:34,506 | INFO     | did not find any defunct processes belonging to 2347373
[2025-11-27 12:56:13] 2025-11-27 17:55:34,522 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:56:13] 2025-11-27 17:55:34,522 | INFO     | ready for new job
[2025-11-27 12:56:13] 2025-11-27 17:55:34,522 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:56:13] 2025-11-27 17:55:34,530 | INFO     | ***************************************
[2025-11-27 12:56:13] 2025-11-27 17:55:34,531 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:56:13] 2025-11-27 17:55:34,531 | INFO     | ***************************************
[2025-11-27 12:56:13] 2025-11-27 17:55:34,531 | INFO     | 
[2025-11-27 12:56:13] 2025-11-27 17:55:34,536 | INFO     | architecture information:
[2025-11-27 12:56:13] 2025-11-27 17:55:34,543 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:56:13] 2025-11-27 17:55:34,583 | INFO     | cat /etc/os-release:
[2025-11-27 12:56:13] NAME="CentOS Linux"
[2025-11-27 12:56:13] VERSION="7 (Core)"
[2025-11-27 12:56:13] ID="centos"
[2025-11-27 12:56:13] ID_LIKE="rhel fedora"
[2025-11-27 12:56:13] VERSION_ID="7"
[2025-11-27 12:56:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:56:13] ANSI_COLOR="0;31"
[2025-11-27 12:56:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:56:13] HOME_URL="https://www.centos.org/"
[2025-11-27 12:56:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:56:13] 
[2025-11-27 12:56:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:56:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:56:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:56:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:56:13] 
[2025-11-27 12:56:13] 2025-11-27 17:55:34,584 | INFO     | ***************************************
[2025-11-27 12:56:13] 2025-11-27 17:55:35,090 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 12:56:13] 2025-11-27 17:55:35,122 | INFO     | sufficient remaining disk space (65244495872 B)
[2025-11-27 12:56:13] 2025-11-27 17:55:35,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:56:13] 2025-11-27 17:55:35,123 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:56:13] 2025-11-27 17:55:35,123 | INFO     | update_server=False
[2025-11-27 12:56:13] 2025-11-27 17:55:35,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:56:13] 2025-11-27 17:55:35,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:56:13] 2025-11-27 17:55:35,123 | INFO     | aborting loop
[2025-11-27 12:56:13] 2025-11-27 17:55:35,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:56:13] 2025-11-27 17:55:35,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:56:13] 2025-11-27 17:55:35,942 | INFO     | all data control threads have been joined
[2025-11-27 12:56:13] 2025-11-27 17:55:36,129 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:36,129 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:36,152 | INFO     | [job] validate thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:36,152 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:36,172 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:36,227 | INFO     | all payload control threads have been joined
[2025-11-27 12:56:13] 2025-11-27 17:55:36,450 | INFO     | all job control threads have been joined
[2025-11-27 12:56:13] 2025-11-27 17:55:36,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:56:13] 2025-11-27 17:55:36,949 | INFO     | [data] control thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,123 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,130 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,232 | INFO     | [payload] control thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,456 | INFO     | [job] control thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,517 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,540 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,583 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,618 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:37,847 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:55:39,132 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:56:13] 2025-11-27 17:56:04,715 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:56:13] 2025-11-27 17:56:04,843 | INFO     | PID=2340554 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:56:13] 2025-11-27 17:56:04,843 | INFO     | .. there are 68 such processes running
[2025-11-27 12:56:13] 2025-11-27 17:56:04,843 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:56:13] 2025-11-27 17:56:04,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:56:13] 2025-11-27 17:56:04,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:56:13] 2025-11-27 17:56:06,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455762634560)>', '<ExcThread(monitor, started 140455278794496)>']
[2025-11-27 12:56:13] 2025-11-27 17:56:06,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:56:13] 2025-11-27 17:56:06,858 | INFO     | [monitor] control thread has ended
[2025-11-27 12:56:13] 2025-11-27 17:56:11,510 | INFO     | all workflow threads have been joined
[2025-11-27 12:56:13] 2025-11-27 17:56:11,510 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:56:13] 2025-11-27 17:56:11,510 | INFO     | traces error code: 0
[2025-11-27 12:56:13] 2025-11-27 17:56:11,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:56:13] 2025-11-27 17:56:11,743 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:56:13] 2025-11-27 17:56:11,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:56:13] 2025-11-27 17:56:11,862 [wrapper] pilotpid: 2340554
[2025-11-27 12:56:13] 2025-11-27 17:56:11,880 [wrapper] Pilot exit status: 0
[2025-11-27 12:56:13] 2025-11-27 17:56:12,005 [wrapper] pandaids: 6896713654
[2025-11-27 12:56:13] 2025-11-27 17:56:12,462 [wrapper] cleanup supervisor_pilot 2269081 2340555
[2025-11-27 12:56:13] 2025-11-27 17:56:12,508 [wrapper] Test setup, not cleaning
[2025-11-27 12:56:13] 2025-11-27 17:56:12,539 [wrapper] apfmon messages muted
[2025-11-27 12:56:13] 2025-11-27 17:56:12,542 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:56:13] 2025-11-27 17:56:12,556 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:56:13]  *** Error codes and diagnostics ***
[2025-11-27 12:56:13]     "exeErrorCode": 0,
[2025-11-27 12:56:13]     "exeErrorDiag": "",
[2025-11-27 12:56:13]     "pilotErrorCode": 0,
[2025-11-27 12:56:13]     "pilotErrorDiag": "",
[2025-11-27 12:56:13]  *** Listing of results directory ***
[2025-11-27 12:56:13] total 1312680
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:25 queuedata.json
[2025-11-27 12:56:13] -rwx------. 1 boincer umatlas     36292 Nov 25 00:26 runpilot2-wrapper.sh
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:56:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:04 run_atlas
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:04 job.xml
[2025-11-27 12:56:13] -rw-r--r--. 2 boincer umatlas 408621799 Nov 27 00:04 EVNT.47483658._002104.pool.root.1
[2025-11-27 12:56:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:04 shared
[2025-11-27 12:56:13] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 00:04 input.tar.gz
[2025-11-27 12:56:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:04 boinc_lockfile
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas      2784 Nov 27 00:04 pandaJob.out
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas        57 Nov 27 00:04 setup.sh.local
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas    991570 Nov 27 00:04 agis_schedconf.cvmfs.json
[2025-11-27 12:56:13] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:40 boinc_task_state.xml
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 12:49 init_data.xml
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas 915759553 Nov 27 12:54 HITS.47556161._000880.pool.root.1
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas      1070 Nov 27 12:55 memory_monitor_summary.json
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas        95 Nov 27 12:55 pilot_heartbeat.json
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas   2074977 Nov 27 12:55 log.47556161._000880.job.log.tgz.1
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas      8624 Nov 27 12:55 heartbeat.json
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:56 boinc_mmap_file
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas      4824 Nov 27 12:56 pilotlog.txt
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:56 wrapper_checkpoint.txt
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas   5864837 Nov 27 12:56 log.47556161._000880.job.log.1
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas       353 Nov 27 12:56 output.list
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:56 runtime_log
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas   7956480 Nov 27 12:56 result.tar.gz
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas       664 Nov 27 12:56 xVGNDmek0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEMJKDmkrubIo.diag
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 12:56 runtime_log.err
[2025-11-27 12:56:13] -rw-r--r--. 1 boincer umatlas     21127 Nov 27 12:56 stderr.txt
[2025-11-27 12:56:13] HITS file was successfully produced:
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas 915759553 Nov 27 12:54 shared/HITS.pool.root.1
[2025-11-27 12:56:13]  *** Contents of shared directory: ***
[2025-11-27 12:56:13] total 1301724
[2025-11-27 12:56:13] -rw-r--r--. 2 boincer umatlas 408621799 Nov 27 00:04 ATLAS.root_0
[2025-11-27 12:56:13] -rw-r--r--. 2 boincer umatlas    590110 Nov 27 00:04 input.tar.gz
[2025-11-27 12:56:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas 915759553 Nov 27 12:54 HITS.pool.root.1
[2025-11-27 12:56:13] -rw-------. 1 boincer umatlas   7956480 Nov 27 12:56 result.tar.gz
12:56:15 (2334588): run_atlas exited; CPU time 195822.643376
12:56:15 (2334588): called boinc_finish(0)

</stderr_txt>
]]>

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