Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:36 (3335976): wrapper (7.7.26015): starting
00:02:36 (3335976): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:02:36] Arguments: --nthreads 9
[2025-11-27 00:02:36] Threads: 9
[2025-11-27 00:02:36] Checking for CVMFS
[2025-11-27 00:02:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:38] 2.13.3.0 11561 29347 200656 153347 0 348 25650179 32935936 30503 16776704 0 168772105 99.792 86337675 32125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:38] CVMFS is ok
[2025-11-27 00:02:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:38] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:38] Checking for apptainer binary...
[2025-11-27 00:02:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:38] Running /usr/bin/apptainer --version
[2025-11-27 00:02:38] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:39] c-8-14.aglt2.org
[2025-11-27 00:02:39] apptainer works
[2025-11-27 00:02:39] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:02:39] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:02:39] Starting ATLAS job with PandaID=6896990419
[2025-11-27 00:02:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:59:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:59:47] 2025-11-28 01:59:06,831 | INFO     | time since job start (75336s) is within the limit (172800.0s)
[2025-11-27 20:59:47] 2025-11-28 01:59:08,023 | INFO     | monitor loop #5076: job 0:6896990419 is in state 'finished'
[2025-11-27 20:59:47] 2025-11-28 01:59:08,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:59:47] 2025-11-28 01:59:08,837 | INFO     | time since job start (75338s) is within the limit (172800.0s)
[2025-11-27 20:59:47] 2025-11-28 01:59:10,544 | INFO     | monitor loop #5077: job 0:6896990419 is in state 'finished'
[2025-11-27 20:59:47] 2025-11-28 01:59:10,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:59:47] 2025-11-28 01:59:10,845 | INFO     | time since job start (75340s) is within the limit (172800.0s)
[2025-11-27 20:59:47] 2025-11-28 01:59:12,852 | INFO     | time since job start (75342s) is within the limit (172800.0s)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,049 | INFO     | monitor loop #5078: job 0:6896990419 is in state 'finished'
[2025-11-27 20:59:47] 2025-11-28 01:59:13,049 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,224 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:59:47] 2025-11-28 01:59:13,231 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1595499999994
[2025-11-27 20:59:47] 2025-11-28 01:59:13,253 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896990419/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,253 | INFO     | extracted standard info from prmon json
[2025-11-27 20:59:47] 2025-11-28 01:59:13,254 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:59:47] 2025-11-28 01:59:13,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:59:47] 2025-11-28 01:59:13,277 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:59:47] 2025-11-28 01:59:13,279 | INFO     | sum of square deviations: 582671463702.7966
[2025-11-27 20:59:47] 2025-11-28 01:59:13,316 | INFO     | sum of deviations: 3434974920645.71
[2025-11-27 20:59:47] 2025-11-28 01:59:13,316 | INFO     | mean x: 1764257508.5372772
[2025-11-27 20:59:47] 2025-11-28 01:59:13,316 | INFO     | mean y: 3122961.071312804
[2025-11-27 20:59:47] 2025-11-28 01:59:13,316 | INFO     | intersect: -10397558508.508171
[2025-11-27 20:59:47] 2025-11-28 01:59:13,318 | INFO     | chi2: 14.288348741977245
[2025-11-27 20:59:47] 2025-11-28 01:59:13,320 | INFO     | sum of square deviations: 575617796254.883
[2025-11-27 20:59:47] 2025-11-28 01:59:13,356 | INFO     | sum of deviations: 3885822457279.769
[2025-11-27 20:59:47] 2025-11-28 01:59:13,357 | INFO     | mean x: 1764257356.0414972
[2025-11-27 20:59:47] 2025-11-28 01:59:13,357 | INFO     | mean y: 3132706.082994304
[2025-11-27 20:59:47] 2025-11-28 01:59:13,357 | INFO     | intersect: -11906837588.670418
[2025-11-27 20:59:47] 2025-11-28 01:59:13,359 | INFO     | chi2: 11.079313877955721
[2025-11-27 20:59:47] 2025-11-28 01:59:13,359 | INFO     | current chi2=11.079313877955721 (change=22.459102321556664 %)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,359 | INFO     | right removable region: 1228
[2025-11-27 20:59:47] 2025-11-28 01:59:13,360 | INFO     | sum of square deviations: 575617015454.8829
[2025-11-27 20:59:47] 2025-11-28 01:59:13,397 | INFO     | sum of deviations: 2903575480022.4355
[2025-11-27 20:59:47] 2025-11-28 01:59:13,397 | INFO     | mean x: 1764257661.0414972
[2025-11-27 20:59:47] 2025-11-28 01:59:13,397 | INFO     | mean y: 3134447.5012205043
[2025-11-27 20:59:47] 2025-11-28 01:59:13,397 | INFO     | intersect: -8896281566.102255
[2025-11-27 20:59:47] 2025-11-28 01:59:13,399 | INFO     | chi2: 10.243631076090828
[2025-11-27 20:59:47] 2025-11-28 01:59:13,399 | INFO     | current chi2=10.243631076090828 (change=28.307803364314456 %)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,401 | INFO     | sum of square deviations: 568619731069.4392
[2025-11-27 20:59:47] 2025-11-28 01:59:13,436 | INFO     | sum of deviations: 2524972462166.1924
[2025-11-27 20:59:47] 2025-11-28 01:59:13,437 | INFO     | mean x: 1764257813.5457516
[2025-11-27 20:59:47] 2025-11-28 01:59:13,437 | INFO     | mean y: 3142696.969771242
[2025-11-27 20:59:47] 2025-11-28 01:59:13,437 | INFO     | intersect: -7831095462.487549
[2025-11-27 20:59:47] 2025-11-28 01:59:13,439 | INFO     | chi2: 8.318293523104229
[2025-11-27 20:59:47] 2025-11-28 01:59:13,439 | INFO     | current chi2=8.318293523104229 (change=18.795459722094428 %)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,439 | INFO     | left removable region: 20
[2025-11-27 20:59:47] 2025-11-28 01:59:13,441 | INFO     | sum of square deviations: 546612052411.49634
[2025-11-27 20:59:47] 2025-11-28 01:59:13,475 | INFO     | sum of deviations: 2801255063833.042
[2025-11-27 20:59:47] 2025-11-28 01:59:13,476 | INFO     | mean x: 1764257935.5455298
[2025-11-27 20:59:47] 2025-11-28 01:59:13,476 | INFO     | mean y: 3160481.544701987
[2025-11-27 20:59:47] 2025-11-28 01:59:13,476 | INFO     | intersect: -9038236344.689276
[2025-11-27 20:59:47] 2025-11-28 01:59:13,478 | INFO     | chi2: 4.147453070944972
[2025-11-27 20:59:47] 2025-11-28 01:59:13,478 | INFO     | current memory leak: 5.12 B/s (using 1208 data points, chi2=4.15)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,479 | INFO     | could have reported an average CPU frequency of 2600 MHz (45 samples)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,479 | INFO     | ..............................
[2025-11-27 20:59:47] 2025-11-28 01:59:13,479 | INFO     | . Timing measurements:
[2025-11-27 20:59:47] 2025-11-28 01:59:13,479 | INFO     | . get job = 0 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,479 | INFO     | . initial setup = 4 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,479 | INFO     | . payload setup = 26 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,480 | INFO     | . stage-in = 0 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,480 | INFO     | . payload execution = 75238 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,480 | INFO     | . stage-out = 5 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,480 | INFO     | . log creation = 1 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,480 | INFO     | ..............................
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | 
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | job summary report
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | --------------------------------------------------
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | PanDA job id: 6896990419
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | task id: 47556161
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | errors: (none)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:59:47] 2025-11-28 01:59:13,584 | INFO     | pilot state: finished 
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | transexitcode: 0
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | exeerrorcode: 0
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | exeerrordiag: 
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | exitcode: 0
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | exitmsg: OK
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | cpuconsumptiontime: 305976 s
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | nevents: 1000
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | neventsw: 0
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | pid: 3358598
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | pgrp: 3358598
[2025-11-27 20:59:47] 2025-11-28 01:59:13,585 | INFO     | corecount: 9
[2025-11-27 20:59:47] 2025-11-28 01:59:13,586 | INFO     | event service: False
[2025-11-27 20:59:47] 2025-11-28 01:59:13,586 | INFO     | sizes: {0: 2284038, 1: 2284293, 2: 2284293, 12: 2284321, 21: 2284611, 23: 2284639, 75269: 2347356, 75270: 2347355, 75275: 2356405, 75277: 2356461, 75299: 2356707}
[2025-11-27 20:59:47] 2025-11-28 01:59:13,586 | INFO     | --------------------------------------------------
[2025-11-27 20:59:47] 2025-11-28 01:59:13,586 | INFO     | 
[2025-11-27 20:59:47] 2025-11-28 01:59:13,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 20:59:47] 2025-11-28 01:59:13,623 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:59:47] 2025-11-28 01:59:13,626 | INFO     | job 6896990419 has completed (purged errors)
[2025-11-27 20:59:47] 2025-11-28 01:59:13,626 | INFO     | overall cleanup function is called
[2025-11-27 20:59:47] 2025-11-28 01:59:14,646 | INFO     | --- collectZombieJob: --- 10, [3358598]
[2025-11-27 20:59:47] 2025-11-28 01:59:14,646 | INFO     | zombie collector waiting for pid 3358598
[2025-11-27 20:59:47] 2025-11-28 01:59:14,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:59:47] 2025-11-28 01:59:14,646 | INFO     | collected zombie processes
[2025-11-27 20:59:47] 2025-11-28 01:59:14,646 | INFO     | will attempt to kill all subprocesses of pid=3358598
[2025-11-27 20:59:47] 2025-11-28 01:59:15,822 | INFO     | process IDs to be killed: [3358598] (in reverse order)
[2025-11-27 20:59:47] 2025-11-28 01:59:16,372 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:59:47] 2025-11-28 01:59:16,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:59:47] 2025-11-28 01:59:16,393 | INFO     | did not find any defunct processes belonging to 3358598
[2025-11-27 20:59:47] 2025-11-28 01:59:16,410 | INFO     | did not find any defunct processes belonging to 3358598
[2025-11-27 20:59:47] 2025-11-28 01:59:16,411 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:59:47] 2025-11-28 01:59:16,412 | INFO     | ready for new job
[2025-11-27 20:59:47] 2025-11-28 01:59:16,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:59:47] 2025-11-28 01:59:16,417 | INFO     | ***************************************
[2025-11-27 20:59:47] 2025-11-28 01:59:16,418 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:59:47] 2025-11-28 01:59:16,418 | INFO     | ***************************************
[2025-11-27 20:59:47] 2025-11-28 01:59:16,418 | INFO     | 
[2025-11-27 20:59:47] 2025-11-28 01:59:16,420 | INFO     | architecture information:
[2025-11-27 20:59:47] 2025-11-28 01:59:16,421 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:59:47] 2025-11-28 01:59:16,534 | INFO     | cat /etc/os-release:
[2025-11-27 20:59:47] NAME="CentOS Linux"
[2025-11-27 20:59:47] VERSION="7 (Core)"
[2025-11-27 20:59:47] ID="centos"
[2025-11-27 20:59:47] ID_LIKE="rhel fedora"
[2025-11-27 20:59:47] VERSION_ID="7"
[2025-11-27 20:59:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:59:47] ANSI_COLOR="0;31"
[2025-11-27 20:59:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:59:47] HOME_URL="https://www.centos.org/"
[2025-11-27 20:59:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:59:47] 
[2025-11-27 20:59:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:59:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:59:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:59:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:59:47] 
[2025-11-27 20:59:47] 2025-11-28 01:59:16,534 | INFO     | ***************************************
[2025-11-27 20:59:47] 2025-11-28 01:59:17,041 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 20:59:47] 2025-11-28 01:59:17,087 | INFO     | sufficient remaining disk space (72121057280 B)
[2025-11-27 20:59:47] 2025-11-28 01:59:17,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:59:47] 2025-11-28 01:59:17,088 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:59:47] 2025-11-28 01:59:17,088 | INFO     | update_server=False
[2025-11-27 20:59:47] 2025-11-28 01:59:17,088 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:59:47] 2025-11-28 01:59:17,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:59:47] 2025-11-28 01:59:17,089 | INFO     | aborting loop
[2025-11-27 20:59:47] 2025-11-28 01:59:17,659 | INFO     | all data control threads have been joined
[2025-11-27 20:59:47] 2025-11-28 01:59:17,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:59:47] 2025-11-28 01:59:18,094 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:18,100 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:18,201 | INFO     | all job control threads have been joined
[2025-11-27 20:59:47] 2025-11-28 01:59:18,232 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:18,407 | INFO     | all payload control threads have been joined
[2025-11-27 20:59:47] 2025-11-28 01:59:18,489 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:18,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:18,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:59:47] 2025-11-28 01:59:18,665 | INFO     | [data] control thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:18,792 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,043 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,207 | INFO     | [job] control thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,259 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,339 | INFO     | [job] validate thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,413 | INFO     | [payload] control thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,606 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,720 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:19,813 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:20,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:59:47] 2025-11-28 01:59:24,266 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:59:47] 2025-11-28 01:59:40,501 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:59:47] 2025-11-28 01:59:41,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881603356480)>', '<ExcThread(monitor, started 139880935958272)>']
[2025-11-27 20:59:47] 2025-11-28 01:59:46,135 | INFO     | all workflow threads have been joined
[2025-11-27 20:59:47] 2025-11-28 01:59:46,135 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:59:47] 2025-11-28 01:59:46,135 | INFO     | traces error code: 0
[2025-11-27 20:59:47] 2025-11-28 01:59:46,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:59:47] 2025-11-28 01:59:46,709 | INFO     | PID=3343528 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:59:47] 2025-11-28 01:59:46,710 | INFO     | .. there are 43 such processes running
[2025-11-27 20:59:47] 2025-11-28 01:59:46,710 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:59:47] 2025-11-28 01:59:46,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:59:47] 2025-11-28 01:59:46,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:59:47] 2025-11-28 01:59:46,711 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:59:47] 2025-11-28 01:59:46,711 | INFO     | [monitor] control thread has ended
[2025-11-27 20:59:47] 2025-11-28 01:59:46,981 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:59:47] 2025-11-28 01:59:46,997 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:59:47] 2025-11-28 01:59:47,001 [wrapper] pilotpid: 3343528
[2025-11-27 20:59:47] 2025-11-28 01:59:47,004 [wrapper] Pilot exit status: 0
[2025-11-27 20:59:47] 2025-11-28 01:59:47,026 [wrapper] pandaids: 6896990419
[2025-11-27 20:59:47] 2025-11-28 01:59:47,231 [wrapper] cleanup supervisor_pilot 3033006 3343529
[2025-11-27 20:59:47] 2025-11-28 01:59:47,240 [wrapper] Test setup, not cleaning
[2025-11-27 20:59:47] 2025-11-28 01:59:47,269 [wrapper] apfmon messages muted
[2025-11-27 20:59:47] 2025-11-28 01:59:47,310 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:59:47] 2025-11-28 01:59:47,315 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:59:47]  *** Error codes and diagnostics ***
[2025-11-27 20:59:47]     "exeErrorCode": 0,
[2025-11-27 20:59:47]     "exeErrorDiag": "",
[2025-11-27 20:59:47]     "pilotErrorCode": 0,
[2025-11-27 20:59:47]     "pilotErrorDiag": "",
[2025-11-27 20:59:47]  *** Listing of results directory ***
[2025-11-27 20:59:47] total 1326804
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 20:59:47] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:59:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 20:59:47] -rw-r--r--. 2 boincer umatlas 408829385 Nov 27 00:02 EVNT.47483658._002173.pool.root.1
[2025-11-27 20:59:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 20:59:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 20:59:47] -rw-r--r--. 2 boincer umatlas    590113 Nov 27 00:02 input.tar.gz
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 00:02 pandaJob.out
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 20:59:47] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas       533 Nov 27 20:37 boinc_task_state.xml
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas 920379252 Nov 27 20:57 HITS.47556161._001566.pool.root.1
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 20:58 init_data.xml
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas      1068 Nov 27 20:58 memory_monitor_summary.json
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas   2495923 Nov 27 20:58 log.47556161._001566.job.log.tgz.1
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas        95 Nov 27 20:59 pilot_heartbeat.json
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas      8635 Nov 27 20:59 heartbeat.json
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:59 boinc_mmap_file
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:59 wrapper_checkpoint.txt
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas       823 Nov 27 20:59 pilotlog.txt
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas  10264931 Nov 27 20:59 log.47556161._001566.job.log.1
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas       353 Nov 27 20:59 output.list
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:59 runtime_log
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas  12779520 Nov 27 20:59 result.tar.gz
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 20:59 runtime_log.err
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas       662 Nov 27 20:59 AIEMDmSWBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8SMKDmj5YQFo.diag
[2025-11-27 20:59:47] -rw-r--r--. 1 boincer umatlas     21599 Nov 27 20:59 stderr.txt
[2025-11-27 20:59:47] HITS file was successfully produced:
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas 920379252 Nov 27 20:57 shared/HITS.pool.root.1
[2025-11-27 20:59:47]  *** Contents of shared directory: ***
[2025-11-27 20:59:47] total 1311140
[2025-11-27 20:59:47] -rw-r--r--. 2 boincer umatlas 408829385 Nov 27 00:02 ATLAS.root_0
[2025-11-27 20:59:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 20:59:47] -rw-r--r--. 2 boincer umatlas    590113 Nov 27 00:02 input.tar.gz
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas 920379252 Nov 27 20:57 HITS.pool.root.1
[2025-11-27 20:59:47] -rw-------. 1 boincer umatlas  12779520 Nov 27 20:59 result.tar.gz
20:59:48 (3335976): run_atlas exited; CPU time 308381.872884
20:59:48 (3335976): called boinc_finish(0)

</stderr_txt>
]]>

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