Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:47:35 (1324719): wrapper (7.7.26015): starting
19:47:35 (1324719): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:47:35] Arguments: --nthreads 8
[2025-11-26 19:47:35] Threads: 8
[2025-11-26 19:47:35] Checking for CVMFS
[2025-11-26 19:47:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:47:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:47:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:47:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:47:37] 2.13.2.0 8058 36578 304736 153341 3 738 34920279 40960000 12849 16776704 0 39319886 99.722 26980332 35450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 19:47:37] CVMFS is ok
[2025-11-26 19:47:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:47:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:47:37] Further information can be found at the LHC@home message board.
[2025-11-26 19:47:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:47:37] Checking for apptainer binary...
[2025-11-26 19:47:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:47:37] Running /usr/bin/apptainer --version
[2025-11-26 19:47:37] apptainer version 1.4.4-1.el9
[2025-11-26 19:47:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:47:38] c-210-33-3.aglt2.org
[2025-11-26 19:47:38] apptainer works
[2025-11-26 19:47:38] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:47:38] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:47:38] Starting ATLAS job with PandaID=6892548946
[2025-11-26 19:47:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:18:41]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:18:41] 2025-11-28 02:18:08,028 | INFO     | sum of square deviations: 1052788840483.5133
[2025-11-27 21:18:41] 2025-11-28 02:18:08,053 | INFO     | monitor loop #5799: job 0:6892548946 is in state 'finished'
[2025-11-27 21:18:41] 2025-11-28 02:18:08,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,065 | INFO     | sum of deviations: 6740046754545.904
[2025-11-27 21:18:41] 2025-11-28 02:18:08,065 | INFO     | mean x: 1764250457.2747838
[2025-11-27 21:18:41] 2025-11-28 02:18:08,065 | INFO     | mean y: 2956544.2109115105
[2025-11-27 21:18:41] 2025-11-28 02:18:08,065 | INFO     | intersect: -11291930057.45539
[2025-11-27 21:18:41] 2025-11-28 02:18:08,067 | INFO     | chi2: 13.723845996691917
[2025-11-27 21:18:41] 2025-11-28 02:18:08,068 | INFO     | sum of square deviations: 1042318042962.2126
[2025-11-27 21:18:41] 2025-11-28 02:18:08,104 | INFO     | sum of deviations: 7297743757038.6455
[2025-11-27 21:18:41] 2025-11-28 02:18:08,105 | INFO     | mean x: 1764250304.7857144
[2025-11-27 21:18:41] 2025-11-28 02:18:08,105 | INFO     | mean y: 2964666.1234979974
[2025-11-27 21:18:41] 2025-11-28 02:18:08,105 | INFO     | intersect: -12349355947.087105
[2025-11-27 21:18:41] 2025-11-28 02:18:08,106 | INFO     | chi2: 10.133732839398817
[2025-11-27 21:18:41] 2025-11-28 02:18:08,106 | INFO     | current chi2=10.133732839398817 (change=26.159672428257235 %)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,108 | INFO     | sum of square deviations: 1031916921165.5553
[2025-11-27 21:18:41] 2025-11-28 02:18:08,143 | INFO     | sum of deviations: 7549034497670.3955
[2025-11-27 21:18:41] 2025-11-28 02:18:08,143 | INFO     | mean x: 1764250152.2967181
[2025-11-27 21:18:41] 2025-11-28 02:18:08,143 | INFO     | mean y: 2968345.3489618218
[2025-11-27 21:18:41] 2025-11-28 02:18:08,143 | INFO     | intersect: -12903482735.194414
[2025-11-27 21:18:41] 2025-11-28 02:18:08,145 | INFO     | chi2: 8.858954419045244
[2025-11-27 21:18:41] 2025-11-28 02:18:08,146 | INFO     | current chi2=8.858954419045244 (change=12.579554252677532 %)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,146 | INFO     | right removable region: 1492
[2025-11-27 21:18:41] 2025-11-28 02:18:08,147 | INFO     | sum of square deviations: 1042315040542.2142
[2025-11-27 21:18:41] 2025-11-28 02:18:08,184 | INFO     | sum of deviations: 6119444897134.068
[2025-11-27 21:18:41] 2025-11-28 02:18:08,184 | INFO     | mean x: 1764250609.7857144
[2025-11-27 21:18:41] 2025-11-28 02:18:08,184 | INFO     | mean y: 2965579.8164218958
[2025-11-27 21:18:41] 2025-11-28 02:18:08,184 | INFO     | intersect: -10354972252.206646
[2025-11-27 21:18:41] 2025-11-28 02:18:08,186 | INFO     | chi2: 9.546730753138217
[2025-11-27 21:18:41] 2025-11-28 02:18:08,186 | INFO     | current chi2=9.546730753138217 (change=30.436914291814254 %)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,187 | INFO     | sum of square deviations: 1031910916325.5548
[2025-11-27 21:18:41] 2025-11-28 02:18:08,222 | INFO     | sum of deviations: 5573813325977.166
[2025-11-27 21:18:41] 2025-11-28 02:18:08,223 | INFO     | mean x: 1764250762.2967181
[2025-11-27 21:18:41] 2025-11-28 02:18:08,223 | INFO     | mean y: 2973577.503014066
[2025-11-27 21:18:41] 2025-11-28 02:18:08,223 | INFO     | intersect: -9526535466.0397
[2025-11-27 21:18:41] 2025-11-28 02:18:08,224 | INFO     | chi2: 6.4381554905386995
[2025-11-27 21:18:41] 2025-11-28 02:18:08,225 | INFO     | current chi2=6.4381554905386995 (change=32.5616731316913 %)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,226 | INFO     | sum of square deviations: 1021576599095.4824
[2025-11-27 21:18:41] 2025-11-28 02:18:08,261 | INFO     | sum of deviations: 5322787752865.252
[2025-11-27 21:18:41] 2025-11-28 02:18:08,261 | INFO     | mean x: 1764250914.8051076
[2025-11-27 21:18:41] 2025-11-28 02:18:08,261 | INFO     | mean y: 2977279.045698925
[2025-11-27 21:18:41] 2025-11-28 02:18:08,261 | INFO     | intersect: -9189415313.561283
[2025-11-27 21:18:41] 2025-11-28 02:18:08,263 | INFO     | chi2: 5.787925703020741
[2025-11-27 21:18:41] 2025-11-28 02:18:08,263 | INFO     | current chi2=5.787925703020741 (change=10.099628511201928 %)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,263 | INFO     | left removable region: 30
[2025-11-27 21:18:41] 2025-11-28 02:18:08,264 | INFO     | sum of square deviations: 968955637459.7538
[2025-11-27 21:18:41] 2025-11-28 02:18:08,301 | INFO     | sum of deviations: 5763250055015.403
[2025-11-27 21:18:41] 2025-11-28 02:18:08,301 | INFO     | mean x: 1764251036.8447332
[2025-11-27 21:18:41] 2025-11-28 02:18:08,301 | INFO     | mean y: 2994703.785909713
[2025-11-27 21:18:41] 2025-11-28 02:18:08,301 | INFO     | intersect: -10490591887.869291
[2025-11-27 21:18:41] 2025-11-28 02:18:08,304 | INFO     | chi2: 0.7052162042280712
[2025-11-27 21:18:41] 2025-11-28 02:18:08,304 | INFO     | current memory leak: 5.95 B/s (using 1462 data points, chi2=0.71)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,306 | INFO     | could have reported an average CPU frequency of 2740 MHz (53 samples)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,306 | INFO     | ..............................
[2025-11-27 21:18:41] 2025-11-28 02:18:08,306 | INFO     | . Timing measurements:
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | . get job = 0 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | . initial setup = 6 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | . payload setup = 39 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | . stage-in = 0 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | . payload execution = 91657 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | . stage-out = 3 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | . log creation = 0 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,307 | INFO     | ..............................
[2025-11-27 21:18:41] 2025-11-28 02:18:08,828 | INFO     | 
[2025-11-27 21:18:41] 2025-11-28 02:18:08,828 | INFO     | job summary report
[2025-11-27 21:18:41] 2025-11-28 02:18:08,828 | INFO     | --------------------------------------------------
[2025-11-27 21:18:41] 2025-11-28 02:18:08,828 | INFO     | PanDA job id: 6892548946
[2025-11-27 21:18:41] 2025-11-28 02:18:08,828 | INFO     | task id: 47493029
[2025-11-27 21:18:41] 2025-11-28 02:18:08,828 | INFO     | errors: (none)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | pilot state: finished 
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | transexitcode: 0
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | exeerrorcode: 0
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | exeerrordiag: 
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | exitcode: 0
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | exitmsg: OK
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | cpuconsumptiontime: 259733 s
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | nevents: 1000
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | neventsw: 0
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | pid: 1351680
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | pgrp: 1351680
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | corecount: 8
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | event service: False
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | sizes: {0: 2284077, 1: 2284161, 2: 2284332, 13: 2284360, 24: 2284416, 29: 2284706, 35: 2284862, 91697: 2353518, 91702: 2362512, 91704: 2362568, 91712: 2362910}
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | --------------------------------------------------
[2025-11-27 21:18:41] 2025-11-28 02:18:08,829 | INFO     | 
[2025-11-27 21:18:41] 2025-11-28 02:18:08,830 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 21:18:41] 2025-11-28 02:18:08,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:18:41] 2025-11-28 02:18:08,859 | INFO     | job 6892548946 has completed (purged errors)
[2025-11-27 21:18:41] 2025-11-28 02:18:08,860 | INFO     | overall cleanup function is called
[2025-11-27 21:18:41] 2025-11-28 02:18:09,875 | INFO     | --- collectZombieJob: --- 10, [1351680]
[2025-11-27 21:18:41] 2025-11-28 02:18:09,876 | INFO     | zombie collector waiting for pid 1351680
[2025-11-27 21:18:41] 2025-11-28 02:18:09,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:18:41] 2025-11-28 02:18:09,876 | INFO     | collected zombie processes
[2025-11-27 21:18:41] 2025-11-28 02:18:09,876 | INFO     | will attempt to kill all subprocesses of pid=1351680
[2025-11-27 21:18:41] 2025-11-28 02:18:10,148 | INFO     | process IDs to be killed: [1351680] (in reverse order)
[2025-11-27 21:18:41] 2025-11-28 02:18:10,235 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:18:41] 2025-11-28 02:18:10,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:18:41] 2025-11-28 02:18:10,246 | INFO     | did not find any defunct processes belonging to 1351680
[2025-11-27 21:18:41] 2025-11-28 02:18:10,257 | INFO     | did not find any defunct processes belonging to 1351680
[2025-11-27 21:18:41] 2025-11-28 02:18:10,259 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:18:41] 2025-11-28 02:18:10,259 | INFO     | ready for new job
[2025-11-27 21:18:41] 2025-11-28 02:18:10,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:18:41] 2025-11-28 02:18:10,266 | INFO     | ***************************************
[2025-11-27 21:18:41] 2025-11-28 02:18:10,266 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:18:41] 2025-11-28 02:18:10,266 | INFO     | ***************************************
[2025-11-27 21:18:41] 2025-11-28 02:18:10,266 | INFO     | 
[2025-11-27 21:18:41] 2025-11-28 02:18:10,269 | INFO     | architecture information:
[2025-11-27 21:18:41] 2025-11-28 02:18:10,270 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:18:41] 2025-11-28 02:18:10,288 | INFO     | cat /etc/os-release:
[2025-11-27 21:18:41] NAME="CentOS Linux"
[2025-11-27 21:18:41] VERSION="7 (Core)"
[2025-11-27 21:18:41] ID="centos"
[2025-11-27 21:18:41] ID_LIKE="rhel fedora"
[2025-11-27 21:18:41] VERSION_ID="7"
[2025-11-27 21:18:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:18:41] ANSI_COLOR="0;31"
[2025-11-27 21:18:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:18:41] HOME_URL="https://www.centos.org/"
[2025-11-27 21:18:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:18:41] 
[2025-11-27 21:18:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:18:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:18:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:18:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:18:41] 
[2025-11-27 21:18:41] 2025-11-28 02:18:10,288 | INFO     | ***************************************
[2025-11-27 21:18:41] 2025-11-28 02:18:10,791 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 21:18:41] 2025-11-28 02:18:10,816 | INFO     | sufficient remaining disk space (71125958656 B)
[2025-11-27 21:18:41] 2025-11-28 02:18:10,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:18:41] 2025-11-28 02:18:10,817 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:18:41] 2025-11-28 02:18:10,817 | INFO     | update_server=False
[2025-11-27 21:18:41] 2025-11-28 02:18:10,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:18:41] 2025-11-28 02:18:10,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:18:41] 2025-11-28 02:18:10,910 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:18:41] 2025-11-28 02:18:11,104 | INFO     | all data control threads have been joined
[2025-11-27 21:18:41] 2025-11-28 02:18:11,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:18:41] 2025-11-28 02:18:11,567 | INFO     | aborting loop
[2025-11-27 21:18:41] 2025-11-28 02:18:11,637 | INFO     | all payload control threads have been joined
[2025-11-27 21:18:41] 2025-11-28 02:18:11,822 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,075 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,099 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,111 | INFO     | [data] control thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,179 | INFO     | [job] validate thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,193 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,341 | INFO     | all job control threads have been joined
[2025-11-27 21:18:41] 2025-11-28 02:18:12,416 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,433 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,573 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,643 | INFO     | [payload] control thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,669 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,905 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:12,915 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:13,347 | INFO     | [job] control thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:13,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:18:41] 2025-11-28 02:18:14,415 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:14,824 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:18:41] 2025-11-28 02:18:18,681 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:18:41] 2025-11-28 02:18:19,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884957673280)>', '<ExcThread(monitor, started 139884324972288)>']
[2025-11-27 21:18:41] 2025-11-28 02:18:24,228 | INFO     | all workflow threads have been joined
[2025-11-27 21:18:41] 2025-11-28 02:18:24,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:18:41] 2025-11-28 02:18:24,228 | INFO     | traces error code: 0
[2025-11-27 21:18:41] 2025-11-28 02:18:24,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:18:41] 2025-11-28 02:18:38,789 [wrapper] supervise_pilot (15 min periods counter: 103)
[2025-11-27 21:18:41] 2025-11-28 02:18:41,101 | INFO     | PID=1331321 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:18:41] 2025-11-28 02:18:41,101 | INFO     | .. there are 11 such processes running
[2025-11-27 21:18:41] 2025-11-28 02:18:41,102 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:18:41] 2025-11-28 02:18:41,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:18:41] 2025-11-28 02:18:41,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:18:41] 2025-11-28 02:18:41,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:18:41] 2025-11-28 02:18:41,103 | INFO     | [monitor] control thread has ended
[2025-11-27 21:18:41] 2025-11-28 02:18:41,326 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:18:41] 2025-11-28 02:18:41,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:18:41] 2025-11-28 02:18:41,335 [wrapper] pilotpid: 1331321
[2025-11-27 21:18:41] 2025-11-28 02:18:41,339 [wrapper] Pilot exit status: 0
[2025-11-27 21:18:41] 2025-11-28 02:18:41,376 [wrapper] pandaids: 6892548946
[2025-11-27 21:18:41] 2025-11-28 02:18:41,430 [wrapper] cleanup supervisor_pilot 3650992 1331322
[2025-11-27 21:18:41] 2025-11-28 02:18:41,433 [wrapper] Test setup, not cleaning
[2025-11-27 21:18:41] 2025-11-28 02:18:41,441 [wrapper] apfmon messages muted
[2025-11-27 21:18:41] 2025-11-28 02:18:41,444 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:18:41] 2025-11-28 02:18:41,447 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:18:41]  *** Error codes and diagnostics ***
[2025-11-27 21:18:41]     "exeErrorCode": 0,
[2025-11-27 21:18:41]     "exeErrorDiag": "",
[2025-11-27 21:18:41]     "pilotErrorCode": 0,
[2025-11-27 21:18:41]     "pilotErrorDiag": "",
[2025-11-27 21:18:41]  *** Listing of results directory ***
[2025-11-27 21:18:41] total 1327320
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 03:48 queuedata.json
[2025-11-27 21:18:41] -rwx------. 1 boincer umatlas     36292 Nov 19 03:49 runpilot2-wrapper.sh
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:18:41] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:47 run_atlas
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:47 job.xml
[2025-11-27 21:18:41] -rw-r--r--. 2 boincer umatlas 412697806 Nov 26 19:47 EVNT.47493027._000345.pool.root.1
[2025-11-27 21:18:41] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 19:47 start_atlas.sh
[2025-11-27 21:18:41] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:47 shared
[2025-11-27 21:18:41] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 19:47 input.tar.gz
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:47 boinc_lockfile
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 19:47 pandaJob.out
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas    991546 Nov 26 19:48 agis_schedconf.cvmfs.json
[2025-11-27 21:18:41] drwx------. 5 boincer umatlas      4096 Nov 26 19:48 pilot3
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:08 boinc_task_state.xml
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 21:10 init_data.xml
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas 913546688 Nov 27 21:17 HITS.47493029._003404.pool.root.1
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas      1058 Nov 27 21:17 memory_monitor_summary.json
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas   2527566 Nov 27 21:17 log.47493029._003404.job.log.tgz.1
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas      8621 Nov 27 21:18 heartbeat.json
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:18 boinc_mmap_file
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:18 wrapper_checkpoint.txt
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas        95 Nov 27 21:18 pilot_heartbeat.json
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas       823 Nov 27 21:18 pilotlog.txt
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas  11980252 Nov 27 21:18 log.47493029._003404.job.log.1
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas       353 Nov 27 21:18 output.list
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:18 runtime_log
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas  14530560 Nov 27 21:18 result.tar.gz
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas       662 Nov 27 21:18 zgrNDmO3sf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm95GKDmXMxgEo.diag
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas      8714 Nov 27 21:18 runtime_log.err
[2025-11-27 21:18:41] -rw-r--r--. 1 boincer umatlas     21247 Nov 27 21:18 stderr.txt
[2025-11-27 21:18:41] HITS file was successfully produced:
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas 913546688 Nov 27 21:17 shared/HITS.pool.root.1
[2025-11-27 21:18:41]  *** Contents of shared directory: ***
[2025-11-27 21:18:41] total 1309956
[2025-11-27 21:18:41] -rw-r--r--. 2 boincer umatlas 412697806 Nov 26 19:47 ATLAS.root_0
[2025-11-27 21:18:41] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 19:47 start_atlas.sh
[2025-11-27 21:18:41] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 19:47 input.tar.gz
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas 913546688 Nov 27 21:17 HITS.pool.root.1
[2025-11-27 21:18:41] -rw-------. 1 boincer umatlas  14530560 Nov 27 21:18 result.tar.gz
21:18:43 (1324719): run_atlas exited; CPU time 261227.948538
21:18:43 (1324719): called boinc_finish(0)

</stderr_txt>
]]>

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