Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:45:11 (27175): wrapper (7.7.26015): starting
05:45:11 (27175): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:45:11] Arguments: --nthreads 8
[2025-11-27 05:45:11] Threads: 8
[2025-11-27 05:45:11] Checking for CVMFS
[2025-11-27 05:45:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:45:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:45:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:45:11] 2.11.0.0 4364 67065 80016 153347 2 11 3327720 4096000 26 130560 4 12421009 99.802 4254374 470 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-27 05:45:11] CVMFS is ok
[2025-11-27 05:45:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:45:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:45:11] Further information can be found at the LHC@home message board.
[2025-11-27 05:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:45:11] Checking for apptainer binary...
[2025-11-27 05:45:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-27 05:45:11] apptainer is not installed, using version from CVMFS
[2025-11-27 05:45:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:45:12] WARNING: Environment variable TMPDIR already has value [/tmp/job_10928618/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node280
[2025-11-27 05:45:12] apptainer works
[2025-11-27 05:45:12] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:45:12] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:45:12] Starting ATLAS job with PandaID=6892549240
[2025-11-27 05:45:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10928618/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:10:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:10:49] 2025-11-27 09:10:11,200 | INFO     | stage-out finished correctly
[2025-11-27 10:10:49] 2025-11-27 09:10:11,201 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:10:49] 2025-11-27 09:10:11,269 | INFO     | time since job start (15895s) is within the limit (172800.0s)
[2025-11-27 10:10:49] 2025-11-27 09:10:11,586 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-11-27 10:10:49] 2025-11-27 09:10:11,635 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:10:49] 2025-11-27 09:10:11,636 | INFO     | job 6892549240 has state=finished
[2025-11-27 10:10:49] 2025-11-27 09:10:11,636 | INFO     | preparing for final server update for job 6892549240 in state='finished'
[2025-11-27 10:10:49] 2025-11-27 09:10:11,636 | INFO     | this job has now completed (state=finished)
[2025-11-27 10:10:49] 2025-11-27 09:10:11,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-27 10:10:49] 2025-11-27 09:10:11,636 | INFO     | log transfer has been attempted: DONE
[2025-11-27 10:10:49] 2025-11-27 09:10:11,636 | INFO     | job 6892549240 has finished - writing final server update
[2025-11-27 10:10:49] 2025-11-27 09:10:11,636 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 10:10:49] 2025-11-27 09:10:11,637 | INFO     | executing command: lscpu
[2025-11-27 10:10:49] 2025-11-27 09:10:11,668 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 10:10:49] 2025-11-27 09:10:12,238 | INFO     | monitor loop #1151: job 0:6892549240 is in state 'finished'
[2025-11-27 10:10:49] 2025-11-27 09:10:12,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,130 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 10:10:49] 2025-11-27 09:10:13,135 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2907.6537187500003
[2025-11-27 10:10:49] 2025-11-27 09:10:13,140 | INFO     | using path: /tmp/job_10928618/atlas/pilot/slots/0/PanDA_Pilot-6892549240/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,140 | INFO     | extracted standard info from prmon json
[2025-11-27 10:10:49] 2025-11-27 09:10:13,140 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:10:49] 2025-11-27 09:10:13,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:10:49] 2025-11-27 09:10:13,143 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:10:49] 2025-11-27 09:10:13,143 | INFO     | sum of square deviations: 5513070810.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,144 | INFO     | sum of deviations: 1438755700159.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,144 | INFO     | mean x: 1764226665.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,144 | INFO     | mean y: 3888484.203065134
[2025-11-27 10:10:49] 2025-11-27 09:10:13,144 | INFO     | intersect: -460409419837.01776
[2025-11-27 10:10:49] 2025-11-27 09:10:13,144 | INFO     | chi2: 9.793048016523336
[2025-11-27 10:10:49] 2025-11-27 09:10:13,145 | INFO     | sum of square deviations: 5202255680.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | sum of deviations: 1503571585903.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | mean x: 1764226512.5
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | mean y: 3919937.515625
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | intersect: -509898133798.4792
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | chi2: 9.051095632465975
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | current chi2=9.051095632465975 (change=7.576317228359352 %)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | right removable region: 255
[2025-11-27 10:10:49] 2025-11-27 09:10:13,146 | INFO     | sum of square deviations: 5202255680.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,147 | INFO     | sum of deviations: 1350388941613.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,147 | INFO     | mean x: 1764226817.5
[2025-11-27 10:10:49] 2025-11-27 09:10:13,147 | INFO     | mean y: 3931659.3671875
[2025-11-27 10:10:49] 2025-11-27 09:10:13,147 | INFO     | intersect: -457949796760.4356
[2025-11-27 10:10:49] 2025-11-27 09:10:13,147 | INFO     | chi2: 8.301238836783313
[2025-11-27 10:10:49] 2025-11-27 09:10:13,147 | INFO     | current chi2=8.301238836783313 (change=15.233348975956885 %)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,147 | INFO     | left removable region: 10
[2025-11-27 10:10:49] 2025-11-27 09:10:13,148 | INFO     | sum of square deviations: 4560048290.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,148 | INFO     | sum of deviations: 1350664894999.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | mean x: 1764226787.0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | mean y: 3985104.4
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | intersect: -522551706519.1591
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | chi2: 7.257660426295579
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | current memory leak: 296.20 B/s (using 245 data points, chi2=7.26)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | could have reported an average CPU frequency of 2850 MHz (12 samples)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | ..............................
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . Timing measurements:
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . get job = 0 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . initial setup = 1 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . payload setup = 2 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . stage-in = 0 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . payload execution = 15873 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . stage-out = 1 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | . log creation = 0 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,149 | INFO     | ..............................
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | 
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | job summary report
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | --------------------------------------------------
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | PanDA job id: 6892549240
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | task id: 47493029
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | errors: (none)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | pilot state: finished 
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | transexitcode: 0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | exeerrorcode: 0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | exeerrordiag: 
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | exitcode: 0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | exitmsg: OK
[2025-11-27 10:10:49] 2025-11-27 09:10:13,199 | INFO     | cpuconsumptiontime: 121814 s
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | nevents: 1000
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | neventsw: 0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | pid: 20352
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | pgrp: 20352
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | corecount: 8
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | event service: False
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | sizes: {0: 2284148, 1: 2284458, 2: 2284720, 11: 2284748, 15879: 2317014, 15882: 2326222, 15884: 2326412}
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | --------------------------------------------------
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | 
[2025-11-27 10:10:49] 2025-11-27 09:10:13,200 | INFO     | executing command: ls -lF /tmp/job_10928618/atlas/pilot/slots/0
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | job 6892549240 has completed (purged errors)
[2025-11-27 10:10:49] 2025-11-27 09:10:13,210 | INFO     | overall cleanup function is called
[2025-11-27 10:10:49] 2025-11-27 09:10:14,217 | INFO     | --- collectZombieJob: --- 10, [20352]
[2025-11-27 10:10:49] 2025-11-27 09:10:14,217 | INFO     | zombie collector waiting for pid 20352
[2025-11-27 10:10:49] 2025-11-27 09:10:14,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:10:49] 2025-11-27 09:10:14,217 | INFO     | collected zombie processes
[2025-11-27 10:10:49] 2025-11-27 09:10:14,218 | INFO     | will attempt to kill all subprocesses of pid=20352
[2025-11-27 10:10:49] 2025-11-27 09:10:14,332 | INFO     | process IDs to be killed: [20352] (in reverse order)
[2025-11-27 10:10:49] 2025-11-27 09:10:14,374 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:10:49] 2025-11-27 09:10:14,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:10:49] 2025-11-27 09:10:14,380 | INFO     | did not find any defunct processes belonging to 20352
[2025-11-27 10:10:49] 2025-11-27 09:10:14,384 | INFO     | did not find any defunct processes belonging to 20352
[2025-11-27 10:10:49] 2025-11-27 09:10:14,384 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:10:49] 2025-11-27 09:10:14,384 | INFO     | ready for new job
[2025-11-27 10:10:49] 2025-11-27 09:10:14,384 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:10:49] 2025-11-27 09:10:14,385 | INFO     | ***************************************
[2025-11-27 10:10:49] 2025-11-27 09:10:14,385 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:10:49] 2025-11-27 09:10:14,385 | INFO     | ***************************************
[2025-11-27 10:10:49] 2025-11-27 09:10:14,385 | INFO     | 
[2025-11-27 10:10:49] 2025-11-27 09:10:14,400 | INFO     | architecture information:
[2025-11-27 10:10:49] 2025-11-27 09:10:14,400 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:10:49] 2025-11-27 09:10:14,408 | INFO     | cat /etc/os-release:
[2025-11-27 10:10:49] NAME="CentOS Linux"
[2025-11-27 10:10:49] VERSION="7 (Core)"
[2025-11-27 10:10:49] ID="centos"
[2025-11-27 10:10:49] ID_LIKE="rhel fedora"
[2025-11-27 10:10:49] VERSION_ID="7"
[2025-11-27 10:10:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:10:49] ANSI_COLOR="0;31"
[2025-11-27 10:10:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:10:49] HOME_URL="https://www.centos.org/"
[2025-11-27 10:10:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:10:49] 
[2025-11-27 10:10:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:10:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:10:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:10:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:10:49] 
[2025-11-27 10:10:49] 2025-11-27 09:10:14,408 | INFO     | ***************************************
[2025-11-27 10:10:49] 2025-11-27 09:10:14,911 | INFO     | executing command: df -mP /tmp/job_10928618/atlas/pilot/slots/0
[2025-11-27 10:10:49] 2025-11-27 09:10:14,920 | INFO     | sufficient remaining disk space (215311450112 B)
[2025-11-27 10:10:49] 2025-11-27 09:10:14,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:10:49] 2025-11-27 09:10:14,921 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:10:49] 2025-11-27 09:10:14,921 | INFO     | update_server=False
[2025-11-27 10:10:49] 2025-11-27 09:10:14,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:10:49] 2025-11-27 09:10:14,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:10:49] 2025-11-27 09:10:14,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:10:49] 2025-11-27 09:10:15,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:10:49] 2025-11-27 09:10:15,747 | INFO     | aborting loop
[2025-11-27 10:10:49] 2025-11-27 09:10:15,847 | INFO     | all data control threads have been joined
[2025-11-27 10:10:49] 2025-11-27 09:10:15,921 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:15,921 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:15,951 | INFO     | all job control threads have been joined
[2025-11-27 10:10:49] 2025-11-27 09:10:16,002 | INFO     | all payload control threads have been joined
[2025-11-27 10:10:49] 2025-11-27 09:10:16,019 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:16,165 | INFO     | [job] validate thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:16,227 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:16,642 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:16,752 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:16,851 | INFO     | [data] control thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:16,926 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:16,956 | INFO     | [job] control thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:17,007 | INFO     | [payload] control thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:17,030 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:17,172 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:17,413 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:17,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:10:49] 2025-11-27 09:10:21,645 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:25,718 | INFO     | job.realtimelogging is not enabled
[2025-11-27 10:10:49] 2025-11-27 09:10:26,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:10:49] 2025-11-27 09:10:42,831 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:10:49] 2025-11-27 09:10:43,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-11-27 10:10:49] 2025-11-27 09:10:44,473 | INFO     | PID=1489 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 10:10:49] 2025-11-27 09:10:44,473 | INFO     | .. there are 6 such processes running
[2025-11-27 10:10:49] 2025-11-27 09:10:44,473 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:10:49] 2025-11-27 09:10:44,473 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:10:49] 2025-11-27 09:10:44,473 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:10:49] 2025-11-27 09:10:44,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:10:49] 2025-11-27 09:10:44,473 | INFO     | [monitor] control thread has ended
[2025-11-27 10:10:49] 2025-11-27 09:10:48,997 | INFO     | all workflow threads have been joined
[2025-11-27 10:10:49] 2025-11-27 09:10:48,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:10:49] 2025-11-27 09:10:48,997 | INFO     | traces error code: 0
[2025-11-27 10:10:49] 2025-11-27 09:10:48,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:10:49] 2025-11-27 09:10:49,059 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:10:49] 2025-11-27 09:10:49,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:10:49] 2025-11-27 09:10:49,062 [wrapper] pilotpid: 1489
[2025-11-27 10:10:49] 2025-11-27 09:10:49,063 [wrapper] Pilot exit status: 0
[2025-11-27 10:10:49] 2025-11-27 09:10:49,068 [wrapper] pandaids: 6892549240
[2025-11-27 10:10:49] 2025-11-27 09:10:49,094 [wrapper] cleanup supervisor_pilot 20634 1490
[2025-11-27 10:10:49] 2025-11-27 09:10:49,095 [wrapper] Test setup, not cleaning
[2025-11-27 10:10:49] 2025-11-27 09:10:49,096 [wrapper] apfmon messages muted
[2025-11-27 10:10:49] 2025-11-27 09:10:49,097 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:10:49] 2025-11-27 09:10:49,098 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:10:49]  *** Error codes and diagnostics ***
[2025-11-27 10:10:49]     "exeErrorCode": 0,
[2025-11-27 10:10:49]     "exeErrorDiag": "",
[2025-11-27 10:10:49]     "pilotErrorCode": 0,
[2025-11-27 10:10:49]     "pilotErrorDiag": "",
[2025-11-27 10:10:49]  *** Listing of results directory ***
[2025-11-27 10:10:49] total 1320256
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user    576529 Nov 19 09:32 pilot3.tar.gz
[2025-11-27 10:10:49] -rwx------ 1 mf493845 unix-user     36292 Nov 19 09:48 runpilot2-wrapper.sh
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      5112 Nov 19 09:48 queuedata.json
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user       100 Nov 27 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:10:49] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 27 04:01 run_atlas
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user       105 Nov 27 04:01 job.xml
[2025-11-27 10:10:49] -rw-r--r-- 2 mf493845 unix-user 408382297 Nov 27 05:45 EVNT.47493027._000353.pool.root.1
[2025-11-27 10:10:49] -rw-r--r-- 2 mf493845 unix-user     15120 Nov 27 05:45 start_atlas.sh
[2025-11-27 10:10:49] drwxrwx--x 2 mf493845 unix-user       100 Nov 27 05:45 shared
[2025-11-27 10:10:49] -rw-r--r-- 2 mf493845 unix-user    590098 Nov 27 05:45 input.tar.gz
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      6391 Nov 27 05:45 init_data.xml
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user         0 Nov 27 05:45 boinc_setup_complete
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      8192 Nov 27 05:45 boinc_mmap_file
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user         0 Nov 27 05:45 boinc_lockfile
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      2773 Nov 27 05:45 pandaJob.out
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user    991570 Nov 27 05:45 agis_schedconf.cvmfs.json
[2025-11-27 10:10:49] drwx------ 5 mf493845 unix-user       440 Nov 27 05:45 pilot3
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user 932012006 Nov 27 10:09 HITS.47493029._003484.pool.root.1
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      1026 Nov 27 10:10 memory_monitor_summary.json
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user   1516240 Nov 27 10:10 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user   1560021 Nov 27 10:10 log.47493029._003484.job.log.tgz.1
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      8591 Nov 27 10:10 heartbeat.json
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user        95 Nov 27 10:10 pilot_heartbeat.json
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      4906 Nov 27 10:10 pilotlog.txt
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user   2272331 Nov 27 10:10 log.47493029._003484.job.log.1
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user       353 Nov 27 10:10 output.list
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user       620 Nov 27 10:10 runtime_log
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user   3850240 Nov 27 10:10 result.tar.gz
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user       651 Nov 27 10:10 UknKDm62sf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmk9FKDmxN9L9m.diag
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user      9077 Nov 27 10:10 runtime_log.err
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user     22229 Nov 27 10:10 stderr.txt
[2025-11-27 10:10:49] HITS file was successfully produced:
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user 932012006 Nov 27 10:09 shared/HITS.pool.root.1
[2025-11-27 10:10:49]  *** Contents of shared directory: ***
[2025-11-27 10:10:49] total 1313336
[2025-11-27 10:10:49] -rw-r--r-- 2 mf493845 unix-user 408382297 Nov 27 05:45 ATLAS.root_0
[2025-11-27 10:10:49] -rw-r--r-- 2 mf493845 unix-user     15120 Nov 27 05:45 start_atlas.sh
[2025-11-27 10:10:49] -rw-r--r-- 2 mf493845 unix-user    590098 Nov 27 05:45 input.tar.gz
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user 932012006 Nov 27 10:09 HITS.pool.root.1
[2025-11-27 10:10:49] -rw------- 1 mf493845 unix-user   3850240 Nov 27 10:10 result.tar.gz
10:10:50 (27175): run_atlas exited; CPU time 122005.499552
10:10:50 (27175): called boinc_finish(0)

</stderr_txt>
]]>

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