Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:03 (2211828): wrapper (7.7.26015): starting
00:01:03 (2211828): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 00:01:03] Arguments: --nthreads 12
[2025-11-27 00:01:03] Threads: 12
[2025-11-27 00:01:03] Checking for CVMFS
[2025-11-27 00:01:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:01:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:01:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:01:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:01:05] 2.13.3.0 11541 31041 378420 153347 0 392 18398596 32935936 22480 16776704 0 69536510 99.312 124646675 40216 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:01:05] CVMFS is ok
[2025-11-27 00:01:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:01:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:01:05] Further information can be found at the LHC@home message board.
[2025-11-27 00:01:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:01:05] Checking for apptainer binary...
[2025-11-27 00:01:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:01:05] Running /usr/bin/apptainer --version
[2025-11-27 00:01:05] apptainer version 1.4.4-1.el9
[2025-11-27 00:01:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:01:06] c6-1-26-1.aglt2.org
[2025-11-27 00:01:06] apptainer works
[2025-11-27 00:01:06] Set ATHENA_PROC_NUMBER=12
[2025-11-27 00:01:06] Set ATHENA_CORE_NUMBER=12
[2025-11-27 00:01:06] Starting ATLAS job with PandaID=6892549073
[2025-11-27 00:01:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:33:46]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:33:46] 2025-11-28 03:32:57,231 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:33:46] 2025-11-28 03:32:57,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:33:46] 2025-11-28 03:32:57,257 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:33:46] 2025-11-28 03:32:57,259 | INFO     | sum of square deviations: 724539541682.6157
[2025-11-27 22:33:46] 2025-11-28 03:32:57,296 | INFO     | sum of deviations: 6180563559084.006
[2025-11-27 22:33:46] 2025-11-28 03:32:57,297 | INFO     | mean x: 1764260303.451394
[2025-11-27 22:33:46] 2025-11-28 03:32:57,297 | INFO     | mean y: 3554579.263752826
[2025-11-27 22:33:46] 2025-11-28 03:32:57,297 | INFO     | intersect: -15046173300.221289
[2025-11-27 22:33:46] 2025-11-28 03:32:57,299 | INFO     | chi2: 12.576066071106656
[2025-11-27 22:33:46] 2025-11-28 03:32:57,301 | INFO     | sum of square deviations: 716382050725.9656
[2025-11-27 22:33:46] 2025-11-28 03:32:57,338 | INFO     | sum of deviations: 6749824140406.932
[2025-11-27 22:33:46] 2025-11-28 03:32:57,338 | INFO     | mean x: 1764260150.972012
[2025-11-27 22:33:46] 2025-11-28 03:32:57,339 | INFO     | mean y: 3565218.56580938
[2025-11-27 22:33:46] 2025-11-28 03:32:57,339 | INFO     | intersect: -16619472369.996202
[2025-11-27 22:33:46] 2025-11-28 03:32:57,341 | INFO     | chi2: 9.109631261990426
[2025-11-27 22:33:46] 2025-11-28 03:32:57,341 | INFO     | current chi2=9.109631261990426 (change=27.563745208689046 %)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,343 | INFO     | sum of square deviations: 708286049293.1804
[2025-11-27 22:33:46] 2025-11-28 03:32:57,392 | INFO     | sum of deviations: 7289401663804.841
[2025-11-27 22:33:46] 2025-11-28 03:32:57,392 | INFO     | mean x: 1764259998.4927866
[2025-11-27 22:33:46] 2025-11-28 03:32:57,392 | INFO     | mean y: 3575376.77372817
[2025-11-27 22:33:46] 2025-11-28 03:32:57,392 | INFO     | intersect: -18153495175.76845
[2025-11-27 22:33:46] 2025-11-28 03:32:57,393 | INFO     | chi2: 5.92857898500037
[2025-11-27 22:33:46] 2025-11-28 03:32:57,393 | INFO     | current chi2=5.92857898500037 (change=34.919660143247185 %)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,399 | INFO     | sum of square deviations: 700251063960.8292
[2025-11-27 22:33:46] 2025-11-28 03:32:57,452 | INFO     | sum of deviations: 7576710425156.588
[2025-11-27 22:33:46] 2025-11-28 03:32:57,452 | INFO     | mean x: 1764259846.011433
[2025-11-27 22:33:46] 2025-11-28 03:32:57,452 | INFO     | mean y: 3580826.6272865855
[2025-11-27 22:33:46] 2025-11-28 03:32:57,452 | INFO     | intersect: -19085695371.470318
[2025-11-27 22:33:46] 2025-11-28 03:32:57,454 | INFO     | chi2: 4.808978675508013
[2025-11-27 22:33:46] 2025-11-28 03:32:57,454 | INFO     | current chi2=4.808978675508013 (change=18.884800427303194 %)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,454 | INFO     | right removable region: 1311
[2025-11-27 22:33:46] 2025-11-28 03:32:57,455 | INFO     | sum of square deviations: 716377637985.9651
[2025-11-27 22:33:46] 2025-11-28 03:32:57,540 | INFO     | sum of deviations: 5588215905361.002
[2025-11-27 22:33:46] 2025-11-28 03:32:57,541 | INFO     | mean x: 1764260455.972012
[2025-11-27 22:33:46] 2025-11-28 03:32:57,541 | INFO     | mean y: 3565644.89183056
[2025-11-27 22:33:46] 2025-11-28 03:32:57,541 | INFO     | intersect: -13758824215.545725
[2025-11-27 22:33:46] 2025-11-28 03:32:57,543 | INFO     | chi2: 9.292390202730186
[2025-11-27 22:33:46] 2025-11-28 03:32:57,543 | INFO     | current chi2=9.292390202730186 (change=26.110516991642335 %)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,545 | INFO     | sum of square deviations: 708278433338.7952
[2025-11-27 22:33:46] 2025-11-28 03:32:57,580 | INFO     | sum of deviations: 5312567029407.428
[2025-11-27 22:33:46] 2025-11-28 03:32:57,580 | INFO     | mean x: 1764260608.4813972
[2025-11-27 22:33:46] 2025-11-28 03:32:57,580 | INFO     | mean y: 3570831.1192103266
[2025-11-27 22:33:46] 2025-11-28 03:32:57,580 | INFO     | intersect: -13229576330.67956
[2025-11-27 22:33:46] 2025-11-28 03:32:57,582 | INFO     | chi2: 8.646407693159595
[2025-11-27 22:33:46] 2025-11-28 03:32:57,582 | INFO     | current chi2=8.646407693159595 (change=6.951736802666712 %)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,582 | INFO     | left removable region: 20
[2025-11-27 22:33:46] 2025-11-28 03:32:57,584 | INFO     | sum of square deviations: 667154435621.0878
[2025-11-27 22:33:46] 2025-11-28 03:32:57,620 | INFO     | sum of deviations: 6433766230435.281
[2025-11-27 22:33:46] 2025-11-28 03:32:57,620 | INFO     | mean x: 1764260425.5662277
[2025-11-27 22:33:46] 2025-11-28 03:32:57,620 | INFO     | mean y: 3603900.6165762977
[2025-11-27 22:33:46] 2025-11-28 03:32:57,620 | INFO     | intersect: -17010206608.091658
[2025-11-27 22:33:46] 2025-11-28 03:32:57,622 | INFO     | chi2: 0.6124073006828018
[2025-11-27 22:33:46] 2025-11-28 03:32:57,622 | INFO     | current memory leak: 9.64 B/s (using 1291 data points, chi2=0.61)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | could have reported an average CPU frequency of 2809 MHz (47 samples)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | ..............................
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . Timing measurements:
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . get job = 0 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . initial setup = 4 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . payload setup = 38 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . stage-in = 0 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . payload execution = 80916 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . stage-out = 5 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | . log creation = 1 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,624 | INFO     | ..............................
[2025-11-27 22:33:46] 2025-11-28 03:32:57,734 | INFO     | 
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | job summary report
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | --------------------------------------------------
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | PanDA job id: 6892549073
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | task id: 47493029
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | errors: (none)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | pilot state: finished 
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | transexitcode: 0
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | exeerrorcode: 0
[2025-11-27 22:33:46] 2025-11-28 03:32:57,735 | INFO     | exeerrordiag: 
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | exitcode: 0
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | exitmsg: OK
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | cpuconsumptiontime: 253342 s
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | nevents: 1000
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | neventsw: 0
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | pid: 2224578
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | pgrp: 2224578
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | corecount: 12
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | event service: False
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 23: 2284360, 29: 2284650, 34: 2284678, 80959: 2345852, 80960: 2345851, 80966: 2354901, 80968: 2354957, 80989: 2355203}
[2025-11-27 22:33:46] 2025-11-28 03:32:57,736 | INFO     | --------------------------------------------------
[2025-11-27 22:33:46] 2025-11-28 03:32:57,737 | INFO     | 
[2025-11-27 22:33:46] 2025-11-28 03:32:57,737 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 22:33:46] 2025-11-28 03:32:57,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | job 6892549073 has completed (purged errors)
[2025-11-27 22:33:46] 2025-11-28 03:32:57,777 | INFO     | overall cleanup function is called
[2025-11-27 22:33:46] 2025-11-28 03:32:58,795 | INFO     | --- collectZombieJob: --- 10, [2224578]
[2025-11-27 22:33:46] 2025-11-28 03:32:58,795 | INFO     | zombie collector waiting for pid 2224578
[2025-11-27 22:33:46] 2025-11-28 03:32:58,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:33:46] 2025-11-28 03:32:58,796 | INFO     | collected zombie processes
[2025-11-27 22:33:46] 2025-11-28 03:32:58,796 | INFO     | will attempt to kill all subprocesses of pid=2224578
[2025-11-27 22:33:46] 2025-11-28 03:32:59,660 | INFO     | process IDs to be killed: [2224578] (in reverse order)
[2025-11-27 22:33:46] 2025-11-28 03:32:59,779 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:33:46] 2025-11-28 03:32:59,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:33:46] 2025-11-28 03:32:59,797 | INFO     | did not find any defunct processes belonging to 2224578
[2025-11-27 22:33:46] 2025-11-28 03:32:59,818 | INFO     | did not find any defunct processes belonging to 2224578
[2025-11-27 22:33:46] 2025-11-28 03:32:59,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:33:46] 2025-11-28 03:32:59,821 | INFO     | ready for new job
[2025-11-27 22:33:46] 2025-11-28 03:32:59,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:33:46] 2025-11-28 03:32:59,827 | INFO     | ***************************************
[2025-11-27 22:33:46] 2025-11-28 03:32:59,828 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:33:46] 2025-11-28 03:32:59,828 | INFO     | ***************************************
[2025-11-27 22:33:46] 2025-11-28 03:32:59,828 | INFO     | 
[2025-11-27 22:33:46] 2025-11-28 03:32:59,832 | INFO     | architecture information:
[2025-11-27 22:33:46] 2025-11-28 03:32:59,833 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:33:46] 2025-11-28 03:32:59,884 | INFO     | cat /etc/os-release:
[2025-11-27 22:33:46] NAME="CentOS Linux"
[2025-11-27 22:33:46] VERSION="7 (Core)"
[2025-11-27 22:33:46] ID="centos"
[2025-11-27 22:33:46] ID_LIKE="rhel fedora"
[2025-11-27 22:33:46] VERSION_ID="7"
[2025-11-27 22:33:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:33:46] ANSI_COLOR="0;31"
[2025-11-27 22:33:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:33:46] HOME_URL="https://www.centos.org/"
[2025-11-27 22:33:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:33:46] 
[2025-11-27 22:33:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:33:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:33:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:33:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:33:46] 
[2025-11-27 22:33:46] 2025-11-28 03:32:59,884 | INFO     | ***************************************
[2025-11-27 22:33:46] 2025-11-28 03:33:00,389 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 22:33:46] 2025-11-28 03:33:00,527 | INFO     | sufficient remaining disk space (70146588672 B)
[2025-11-27 22:33:46] 2025-11-28 03:33:00,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:33:46] 2025-11-28 03:33:00,527 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:33:46] 2025-11-28 03:33:00,527 | INFO     | update_server=False
[2025-11-27 22:33:46] 2025-11-28 03:33:00,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:33:46] 2025-11-28 03:33:00,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:33:46] 2025-11-28 03:33:00,528 | INFO     | aborting loop
[2025-11-27 22:33:46] 2025-11-28 03:33:00,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:33:46] 2025-11-28 03:33:00,744 | INFO     | all payload control threads have been joined
[2025-11-27 22:33:46] 2025-11-28 03:33:00,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:33:46] 2025-11-28 03:33:00,994 | INFO     | all data control threads have been joined
[2025-11-27 22:33:46] 2025-11-28 03:33:00,995 | INFO     | all job control threads have been joined
[2025-11-27 22:33:46] 2025-11-28 03:33:01,533 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:01,534 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:01,583 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:01,675 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:01,750 | INFO     | [payload] control thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:01,867 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:01,992 | INFO     | [job] validate thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:02,000 | INFO     | [data] control thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:02,001 | INFO     | [job] control thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:02,068 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:02,162 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:02,535 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:02,677 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:02,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:33:46] 2025-11-28 03:33:03,013 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:03,781 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:04,802 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:33:46] 2025-11-28 03:33:30,326 | INFO     | PID=2216855 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 22:33:46] 2025-11-28 03:33:30,327 | INFO     | .. there are 25 such processes running
[2025-11-27 22:33:46] 2025-11-28 03:33:30,327 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:33:46] 2025-11-28 03:33:30,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:33:46] 2025-11-28 03:33:30,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:33:46] 2025-11-28 03:33:40,895 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:33:46] 2025-11-28 03:33:41,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140582969739072)>', '<ExcThread(monitor, started 140582257157888)>']
[2025-11-27 22:33:46] 2025-11-28 03:33:41,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:33:46] 2025-11-28 03:33:41,394 | INFO     | [monitor] control thread has ended
[2025-11-27 22:33:46] 2025-11-28 03:33:46,363 | INFO     | all workflow threads have been joined
[2025-11-27 22:33:46] 2025-11-28 03:33:46,363 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:33:46] 2025-11-28 03:33:46,364 | INFO     | traces error code: 0
[2025-11-27 22:33:46] 2025-11-28 03:33:46,364 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:33:46] 2025-11-28 03:33:46,538 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:33:46] 2025-11-28 03:33:46,541 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:33:46] 2025-11-28 03:33:46,543 [wrapper] pilotpid: 2216855
[2025-11-27 22:33:46] 2025-11-28 03:33:46,545 [wrapper] Pilot exit status: 0
[2025-11-27 22:33:46] 2025-11-28 03:33:46,557 [wrapper] pandaids: 6892549073
[2025-11-27 22:33:46] 2025-11-28 03:33:46,623 [wrapper] cleanup supervisor_pilot 1733178 2216856
[2025-11-27 22:33:46] 2025-11-28 03:33:46,626 [wrapper] Test setup, not cleaning
[2025-11-27 22:33:46] 2025-11-28 03:33:46,629 [wrapper] apfmon messages muted
[2025-11-27 22:33:46] 2025-11-28 03:33:46,632 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:33:46] 2025-11-28 03:33:46,634 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:33:46]  *** Error codes and diagnostics ***
[2025-11-27 22:33:46]     "exeErrorCode": 0,
[2025-11-27 22:33:46]     "exeErrorDiag": "",
[2025-11-27 22:33:46]     "pilotErrorCode": 0,
[2025-11-27 22:33:46]     "pilotErrorDiag": "",
[2025-11-27 22:33:46]  *** Listing of results directory ***
[2025-11-27 22:33:46] total 1329804
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-27 22:33:46] -rwx------. 1 boincer umatlas     36292 Nov 19 03:48 runpilot2-wrapper.sh
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 03:48 queuedata.json
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:33:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:01 run_atlas
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:01 job.xml
[2025-11-27 22:33:46] -rw-r--r--. 2 boincer umatlas 411177234 Nov 27 00:01 EVNT.47493027._000351.pool.root.1
[2025-11-27 22:33:46] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:01 start_atlas.sh
[2025-11-27 22:33:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:01 shared
[2025-11-27 22:33:46] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 00:01 input.tar.gz
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:01 boinc_lockfile
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 00:01 pandaJob.out
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas    991570 Nov 27 00:02 agis_schedconf.cvmfs.json
[2025-11-27 22:33:46] drwx------. 5 boincer umatlas      4096 Nov 27 00:02 pilot3
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas       533 Nov 27 22:12 boinc_task_state.xml
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas      6845 Nov 27 22:30 init_data.xml
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas 921506023 Nov 27 22:31 HITS.47493029._003463.pool.root.1
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas      1058 Nov 27 22:32 memory_monitor_summary.json
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas   1516240 Nov 27 22:32 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas   2777261 Nov 27 22:32 log.47493029._003463.job.log.tgz.1
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas      8639 Nov 27 22:32 heartbeat.json
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas        95 Nov 27 22:33 pilot_heartbeat.json
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas        29 Nov 27 22:33 wrapper_checkpoint.txt
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas      4824 Nov 27 22:33 pilotlog.txt
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas   9782251 Nov 27 22:33 log.47493029._003463.job.log.1
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas       353 Nov 27 22:33 output.list
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas       620 Nov 27 22:33 runtime_log
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas  12574720 Nov 27 22:33 result.tar.gz
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas      8711 Nov 27 22:33 runtime_log.err
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas       662 Nov 27 22:33 JYQODm52sf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmR9FKDmr9iXrn.diag
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas     21171 Nov 27 22:33 stderr.txt
[2025-11-27 22:33:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 22:33 boinc_mmap_file
[2025-11-27 22:33:46] HITS file was successfully produced:
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas 921506023 Nov 27 22:31 shared/HITS.pool.root.1
[2025-11-27 22:33:46]  *** Contents of shared directory: ***
[2025-11-27 22:33:46] total 1314336
[2025-11-27 22:33:46] -rw-r--r--. 2 boincer umatlas 411177234 Nov 27 00:01 ATLAS.root_0
[2025-11-27 22:33:46] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:01 start_atlas.sh
[2025-11-27 22:33:46] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 00:01 input.tar.gz
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas 921506023 Nov 27 22:31 HITS.pool.root.1
[2025-11-27 22:33:46] -rw-------. 1 boincer umatlas  12574720 Nov 27 22:33 result.tar.gz
22:33:48 (2211828): run_atlas exited; CPU time 254792.928922
22:33:48 (2211828): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN