Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:13 (1317622): wrapper (7.7.26015): starting
00:02:13 (1317622): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:02:13] Arguments: --nthreads 8
[2025-11-27 00:02:13] Threads: 8
[2025-11-27 00:02:13] Checking for CVMFS
[2025-11-27 00:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:16] 2.13.3.0 11379 31044 343700 153347 3 571 20760588 32935936 35369 16776704 0 116979565 99.439 163343757 38923 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:16] CVMFS is ok
[2025-11-27 00:02:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:16] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:16] Checking for apptainer binary...
[2025-11-27 00:02:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:16] Running /usr/bin/apptainer --version
[2025-11-27 00:02:16] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:17] c6-4-5-1.aglt2.org
[2025-11-27 00:02:17] apptainer works
[2025-11-27 00:02:17] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:02:17] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:02:17] Starting ATLAS job with PandaID=6898040307
[2025-11-27 00:02:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:50:58]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:50:58] 2025-11-27 17:50:17,120 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:50:58] 2025-11-27 17:50:17,121 | INFO     | sum of square deviations: 131865757936.83916
[2025-11-27 12:50:58] 2025-11-27 17:50:17,136 | INFO     | sum of deviations: 863208041385.67
[2025-11-27 12:50:58] 2025-11-27 17:50:17,136 | INFO     | mean x: 1764242859.6103723
[2025-11-27 12:50:58] 2025-11-27 17:50:17,136 | INFO     | mean y: 2847994.5039893617
[2025-11-27 12:50:58] 2025-11-27 17:50:17,136 | INFO     | intersect: -11546083640.214731
[2025-11-27 12:50:58] 2025-11-27 17:50:17,137 | INFO     | chi2: 10.462262631543082
[2025-11-27 12:50:58] 2025-11-27 17:50:17,138 | INFO     | sum of square deviations: 129253392959.42178
[2025-11-27 12:50:58] 2025-11-27 17:50:17,155 | INFO     | monitor loop #2934: job 0:6898040307 is in state 'finished'
[2025-11-27 12:50:58] 2025-11-27 17:50:17,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,160 | INFO     | sum of deviations: 1123926752283.9575
[2025-11-27 12:50:58] 2025-11-27 17:50:17,160 | INFO     | mean x: 1764242707.124498
[2025-11-27 12:50:58] 2025-11-27 17:50:17,161 | INFO     | mean y: 2863213.548862115
[2025-11-27 12:50:58] 2025-11-27 17:50:17,161 | INFO     | intersect: -15338162121.713366
[2025-11-27 12:50:58] 2025-11-27 17:50:17,164 | INFO     | chi2: 6.980162006787991
[2025-11-27 12:50:58] 2025-11-27 17:50:17,164 | INFO     | current chi2=6.980162006787991 (change=33.282481499334295 %)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,165 | INFO     | sum of square deviations: 126675772819.20251
[2025-11-27 12:50:58] 2025-11-27 17:50:17,191 | INFO     | sum of deviations: 1338318273610.4875
[2025-11-27 12:50:58] 2025-11-27 17:50:17,196 | INFO     | mean x: 1764242554.638814
[2025-11-27 12:50:58] 2025-11-27 17:50:17,196 | INFO     | mean y: 2875885.281671159
[2025-11-27 12:50:58] 2025-11-27 17:50:17,196 | INFO     | intersect: -18636189797.185253
[2025-11-27 12:50:58] 2025-11-27 17:50:17,197 | INFO     | chi2: 4.417573946334946
[2025-11-27 12:50:58] 2025-11-27 17:50:17,197 | INFO     | current chi2=4.417573946334946 (change=36.71244389401001 %)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,198 | INFO     | sum of square deviations: 124132574802.28212
[2025-11-27 12:50:58] 2025-11-27 17:50:17,224 | INFO     | sum of deviations: 1394030457649.9507
[2025-11-27 12:50:58] 2025-11-27 17:50:17,224 | INFO     | mean x: 1764242402.1506107
[2025-11-27 12:50:58] 2025-11-27 17:50:17,224 | INFO     | mean y: 2879218.3337856173
[2025-11-27 12:50:58] 2025-11-27 17:50:17,224 | INFO     | intersect: -19809870554.98558
[2025-11-27 12:50:58] 2025-11-27 17:50:17,225 | INFO     | chi2: 4.108101879831536
[2025-11-27 12:50:58] 2025-11-27 17:50:17,225 | INFO     | current chi2=4.108101879831536 (change=7.005475635787936 %)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,225 | INFO     | right removable region: 736
[2025-11-27 12:50:58] 2025-11-27 17:50:17,226 | INFO     | sum of square deviations: 129252424889.42162
[2025-11-27 12:50:58] 2025-11-27 17:50:17,236 | INFO     | sum of deviations: 585131795368.5176
[2025-11-27 12:50:58] 2025-11-27 17:50:17,236 | INFO     | mean x: 1764243012.124498
[2025-11-27 12:50:58] 2025-11-27 17:50:17,237 | INFO     | mean y: 2864214.7148594377
[2025-11-27 12:50:58] 2025-11-27 17:50:17,237 | INFO     | intersect: -7983946725.458507
[2025-11-27 12:50:58] 2025-11-27 17:50:17,238 | INFO     | chi2: 6.861950668986907
[2025-11-27 12:50:58] 2025-11-27 17:50:17,238 | INFO     | current chi2=6.861950668986907 (change=34.41236460363225 %)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,239 | INFO     | sum of square deviations: 126674064648.55676
[2025-11-27 12:50:58] 2025-11-27 17:50:17,248 | INFO     | sum of deviations: 507031127610.9436
[2025-11-27 12:50:58] 2025-11-27 17:50:17,248 | INFO     | mean x: 1764243164.6320755
[2025-11-27 12:50:58] 2025-11-27 17:50:17,249 | INFO     | mean y: 2868825.867924528
[2025-11-27 12:50:58] 2025-11-27 17:50:17,249 | INFO     | intersect: -7058767694.7968645
[2025-11-27 12:50:58] 2025-11-27 17:50:17,250 | INFO     | chi2: 6.549189716052033
[2025-11-27 12:50:58] 2025-11-27 17:50:17,250 | INFO     | current chi2=6.549189716052033 (change=4.557901506759882 %)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,250 | INFO     | left removable region: 20
[2025-11-27 12:50:58] 2025-11-27 17:50:17,251 | INFO     | sum of square deviations: 113819857224.40211
[2025-11-27 12:50:58] 2025-11-27 17:50:17,259 | INFO     | sum of deviations: 957998686543.9615
[2025-11-27 12:50:58] 2025-11-27 17:50:17,260 | INFO     | mean x: 1764242981.6927373
[2025-11-27 12:50:58] 2025-11-27 17:50:17,260 | INFO     | mean y: 2905523.127094972
[2025-11-27 12:50:58] 2025-11-27 17:50:17,260 | INFO     | intersect: -14846370345.088379
[2025-11-27 12:50:58] 2025-11-27 17:50:17,261 | INFO     | chi2: 0.0624860985783352
[2025-11-27 12:50:58] 2025-11-27 17:50:17,261 | INFO     | current memory leak: 8.42 B/s (using 716 data points, chi2=0.06)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,262 | INFO     | could have reported an average CPU frequency of 3036 MHz (29 samples)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,262 | INFO     | ..............................
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . Timing measurements:
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . get job = 0 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . initial setup = 5 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . payload setup = 40 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . stage-in = 0 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . payload execution = 45871 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . stage-out = 4 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | . log creation = 0 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,263 | INFO     | ..............................
[2025-11-27 12:50:58] 2025-11-27 17:50:17,348 | INFO     | 
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | job summary report
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | --------------------------------------------------
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | PanDA job id: 6898040307
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | task id: 47556173
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | errors: (none)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | pilot state: finished 
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | transexitcode: 0
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | exeerrorcode: 0
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | exeerrordiag: 
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | exitcode: 0
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | exitmsg: OK
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | cpuconsumptiontime: 228534 s
[2025-11-27 12:50:58] 2025-11-27 17:50:17,349 | INFO     | nevents: 1000
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | neventsw: 0
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | pid: 1338857
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | pgrp: 1338857
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | corecount: 8
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | event service: False
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 23: 2284320, 30: 2284610, 34: 2284638, 45916: 2331407, 45922: 2340401, 45925: 2340457, 45938: 2340703}
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | --------------------------------------------------
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | 
[2025-11-27 12:50:58] 2025-11-27 17:50:17,350 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 12:50:58] 2025-11-27 17:50:17,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,375 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | job 6898040307 has completed (purged errors)
[2025-11-27 12:50:58] 2025-11-27 17:50:17,376 | INFO     | overall cleanup function is called
[2025-11-27 12:50:58] 2025-11-27 17:50:18,392 | INFO     | --- collectZombieJob: --- 10, [1338857]
[2025-11-27 12:50:58] 2025-11-27 17:50:18,393 | INFO     | zombie collector waiting for pid 1338857
[2025-11-27 12:50:58] 2025-11-27 17:50:18,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:50:58] 2025-11-27 17:50:18,393 | INFO     | collected zombie processes
[2025-11-27 12:50:58] 2025-11-27 17:50:18,393 | INFO     | will attempt to kill all subprocesses of pid=1338857
[2025-11-27 12:50:58] 2025-11-27 17:50:18,758 | INFO     | process IDs to be killed: [1338857] (in reverse order)
[2025-11-27 12:50:58] 2025-11-27 17:50:18,915 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:50:58] 2025-11-27 17:50:18,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:50:58] 2025-11-27 17:50:19,018 | INFO     | did not find any defunct processes belonging to 1338857
[2025-11-27 12:50:58] 2025-11-27 17:50:19,053 | INFO     | did not find any defunct processes belonging to 1338857
[2025-11-27 12:50:58] 2025-11-27 17:50:19,062 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:50:58] 2025-11-27 17:50:19,062 | INFO     | ready for new job
[2025-11-27 12:50:58] 2025-11-27 17:50:19,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:50:58] 2025-11-27 17:50:19,069 | INFO     | ***************************************
[2025-11-27 12:50:58] 2025-11-27 17:50:19,069 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:50:58] 2025-11-27 17:50:19,069 | INFO     | ***************************************
[2025-11-27 12:50:58] 2025-11-27 17:50:19,069 | INFO     | 
[2025-11-27 12:50:58] 2025-11-27 17:50:19,077 | INFO     | architecture information:
[2025-11-27 12:50:58] 2025-11-27 17:50:19,082 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:50:58] 2025-11-27 17:50:19,128 | INFO     | cat /etc/os-release:
[2025-11-27 12:50:58] NAME="CentOS Linux"
[2025-11-27 12:50:58] VERSION="7 (Core)"
[2025-11-27 12:50:58] ID="centos"
[2025-11-27 12:50:58] ID_LIKE="rhel fedora"
[2025-11-27 12:50:58] VERSION_ID="7"
[2025-11-27 12:50:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:50:58] ANSI_COLOR="0;31"
[2025-11-27 12:50:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:50:58] HOME_URL="https://www.centos.org/"
[2025-11-27 12:50:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:50:58] 
[2025-11-27 12:50:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:50:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:50:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:50:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:50:58] 
[2025-11-27 12:50:58] 2025-11-27 17:50:19,128 | INFO     | ***************************************
[2025-11-27 12:50:58] 2025-11-27 17:50:19,632 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 12:50:58] 2025-11-27 17:50:19,682 | INFO     | sufficient remaining disk space (69833064448 B)
[2025-11-27 12:50:58] 2025-11-27 17:50:19,682 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:50:58] 2025-11-27 17:50:19,682 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:50:58] 2025-11-27 17:50:19,683 | INFO     | update_server=False
[2025-11-27 12:50:58] 2025-11-27 17:50:19,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:50:58] 2025-11-27 17:50:19,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:50:58] 2025-11-27 17:50:19,683 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:50:58] 2025-11-27 17:50:20,322 | INFO     | all job control threads have been joined
[2025-11-27 12:50:58] 2025-11-27 17:50:20,640 | INFO     | all data control threads have been joined
[2025-11-27 12:50:58] 2025-11-27 17:50:20,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:50:58] 2025-11-27 17:50:20,686 | INFO     | aborting loop
[2025-11-27 12:50:58] 2025-11-27 17:50:20,690 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:20,729 | INFO     | [job] validate thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:20,819 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,041 | INFO     | all payload control threads have been joined
[2025-11-27 12:50:58] 2025-11-27 17:50:21,329 | INFO     | [job] control thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,369 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,406 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,631 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,646 | INFO     | [data] control thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,691 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,698 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,721 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:21,925 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:22,053 | INFO     | [payload] control thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:22,188 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:22,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:50:58] 2025-11-27 17:50:23,376 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:23,700 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:50:58] 2025-11-27 17:50:50,719 | INFO     | PID=1328939 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:50:58] 2025-11-27 17:50:50,719 | INFO     | .. there are 47 such processes running
[2025-11-27 12:50:58] 2025-11-27 17:50:50,720 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:50:58] 2025-11-27 17:50:50,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:50:58] 2025-11-27 17:50:50,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:50:58] 2025-11-27 17:50:51,225 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:50:58] 2025-11-27 17:50:52,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140507421493056)>', '<ExcThread(monitor, started 140507078444800)>']
[2025-11-27 12:50:58] 2025-11-27 17:50:52,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:50:58] 2025-11-27 17:50:52,733 | INFO     | [monitor] control thread has ended
[2025-11-27 12:50:58] 2025-11-27 17:50:57,258 | INFO     | all workflow threads have been joined
[2025-11-27 12:50:58] 2025-11-27 17:50:57,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:50:58] 2025-11-27 17:50:57,258 | INFO     | traces error code: 0
[2025-11-27 12:50:58] 2025-11-27 17:50:57,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:50:58] 2025-11-27 17:50:57,557 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:50:58] 2025-11-27 17:50:57,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:50:58] 2025-11-27 17:50:57,667 [wrapper] pilotpid: 1328939
[2025-11-27 12:50:58] 2025-11-27 17:50:57,699 [wrapper] Pilot exit status: 0
[2025-11-27 12:50:58] 2025-11-27 17:50:57,771 [wrapper] pandaids: 6898040307
[2025-11-27 12:50:58] 2025-11-27 17:50:58,041 [wrapper] cleanup supervisor_pilot  359372 1328940
[2025-11-27 12:50:58] 2025-11-27 17:50:58,055 [wrapper] Test setup, not cleaning
[2025-11-27 12:50:58] 2025-11-27 17:50:58,075 [wrapper] apfmon messages muted
[2025-11-27 12:50:58] 2025-11-27 17:50:58,127 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:50:58] 2025-11-27 17:50:58,186 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:50:58]  *** Error codes and diagnostics ***
[2025-11-27 12:50:58]     "exeErrorCode": 0,
[2025-11-27 12:50:58]     "exeErrorDiag": "",
[2025-11-27 12:50:58]     "pilotErrorCode": 0,
[2025-11-27 12:50:58]     "pilotErrorDiag": "",
[2025-11-27 12:50:58]  *** Listing of results directory ***
[2025-11-27 12:50:58] total 1308956
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:06 queuedata.json
[2025-11-27 12:50:58] -rwx------. 1 boincer umatlas     36292 Nov 25 22:09 runpilot2-wrapper.sh
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:50:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 12:50:58] -rw-r--r--. 2 boincer umatlas 408595963 Nov 27 00:02 EVNT.47483658._003159.pool.root.1
[2025-11-27 12:50:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:50:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 12:50:58] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:02 pandaJob.out
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 12:50:58] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:34 boinc_task_state.xml
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas      6877 Nov 27 12:48 init_data.xml
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas 911836976 Nov 27 12:49 HITS.47556173._001160.pool.root.1
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas      1058 Nov 27 12:49 memory_monitor_summary.json
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:49 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas   1964386 Nov 27 12:50 log.47556173._001160.job.log.tgz.1
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas      8620 Nov 27 12:50 heartbeat.json
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas        95 Nov 27 12:50 pilot_heartbeat.json
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:50 wrapper_checkpoint.txt
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas      4824 Nov 27 12:50 pilotlog.txt
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas   6042951 Nov 27 12:50 log.47556173._001160.job.log.1
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:50 boinc_mmap_file
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas       353 Nov 27 12:50 output.list
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:50 runtime_log
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas   8028160 Nov 27 12:50 result.tar.gz
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 12:50 runtime_log.err
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas       660 Nov 27 12:50 AD1KDmk5Ki8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmpJKDmSBEE6m.diag
[2025-11-27 12:50:58] -rw-r--r--. 1 boincer umatlas     21209 Nov 27 12:50 stderr.txt
[2025-11-27 12:50:58] HITS file was successfully produced:
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas 911836976 Nov 27 12:49 shared/HITS.pool.root.1
[2025-11-27 12:50:58]  *** Contents of shared directory: ***
[2025-11-27 12:50:58] total 1297932
[2025-11-27 12:50:58] -rw-r--r--. 2 boincer umatlas 408595963 Nov 27 00:02 ATLAS.root_0
[2025-11-27 12:50:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:50:58] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas 911836976 Nov 27 12:49 HITS.pool.root.1
[2025-11-27 12:50:58] -rw-------. 1 boincer umatlas   8028160 Nov 27 12:50 result.tar.gz
12:51:19 (1317622): run_atlas exited; CPU time 230019.488556
12:51:19 (1317622): called boinc_finish(0)

</stderr_txt>
]]>

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