Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:23:35 (690): wrapper (7.7.26015): starting
19:23:35 (690): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:23:35] Arguments: --nthreads 8
[2025-11-26 19:23:35] Threads: 8
[2025-11-26 19:23:35] Checking for CVMFS
[2025-11-26 19:23:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:23:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:23:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:23:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:23:35] 2.11.2.0 28705 118558 145036 153341 0 82 10627688 18432001 1617 130560 0 87014158 99.975 5046405 32093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 19:23:35] CVMFS is ok
[2025-11-26 19:23:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:23:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:23:35] Further information can be found at the LHC@home message board.
[2025-11-26 19:23:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:23:35] Checking for apptainer binary...
[2025-11-26 19:23:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:23:35] Running /usr/bin/apptainer --version
[2025-11-26 19:23:35] apptainer version 1.3.2-1.el7
[2025-11-26 19:23:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:23:36] c-206-27.aglt2.org
[2025-11-26 19:23:36] apptainer works
[2025-11-26 19:23:36] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:23:36] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:23:36] Starting ATLAS job with PandaID=6898039443
[2025-11-26 19:23:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:41:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:41:48] 2025-11-27 19:41:13,398 | INFO     | time since job start (69446s) is within the limit (172800.0s)
[2025-11-27 14:41:48] 2025-11-27 19:41:13,850 | INFO     | monitor loop #4971: job 0:6898039443 is in state 'finished'
[2025-11-27 14:41:48] 2025-11-27 19:41:13,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,543 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 14:41:48] 2025-11-27 19:41:14,546 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2072.9583333333335
[2025-11-27 14:41:48] 2025-11-27 19:41:14,549 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898039443/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,550 | INFO     | extracted standard info from prmon json
[2025-11-27 14:41:48] 2025-11-27 19:41:14,550 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:41:48] 2025-11-27 19:41:14,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:41:48] 2025-11-27 19:41:14,565 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:41:48] 2025-11-27 19:41:14,566 | INFO     | sum of square deviations: 456987227291.77826
[2025-11-27 14:41:48] 2025-11-27 19:41:14,590 | INFO     | sum of deviations: 2174370813279.1567
[2025-11-27 14:41:48] 2025-11-27 19:41:14,590 | INFO     | mean x: 1764237732.1265378
[2025-11-27 14:41:48] 2025-11-27 19:41:14,590 | INFO     | mean y: 2870043.4086115994
[2025-11-27 14:41:48] 2025-11-27 19:41:14,590 | INFO     | intersect: -8391471862.284234
[2025-11-27 14:41:48] 2025-11-27 19:41:14,591 | INFO     | chi2: 4.429758101558444
[2025-11-27 14:41:48] 2025-11-27 19:41:14,592 | INFO     | sum of square deviations: 450990299752.30725
[2025-11-27 14:41:48] 2025-11-27 19:41:14,615 | INFO     | sum of deviations: 2465550044059.7007
[2025-11-27 14:41:48] 2025-11-27 19:41:14,615 | INFO     | mean x: 1764237579.6293027
[2025-11-27 14:41:48] 2025-11-27 19:41:14,615 | INFO     | mean y: 2877443.8040600177
[2025-11-27 14:41:48] 2025-11-27 19:41:14,616 | INFO     | intersect: -9642154931.783201
[2025-11-27 14:41:48] 2025-11-27 19:41:14,617 | INFO     | chi2: 2.4455104755619392
[2025-11-27 14:41:48] 2025-11-27 19:41:14,617 | INFO     | current chi2=2.4455104755619392 (change=44.79358873565628 %)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,618 | INFO     | sum of square deviations: 445046070875.3184
[2025-11-27 14:41:48] 2025-11-27 19:41:14,640 | INFO     | sum of deviations: 2554667804933.239
[2025-11-27 14:41:48] 2025-11-27 19:41:14,640 | INFO     | mean x: 1764237427.1320922
[2025-11-27 14:41:48] 2025-11-27 19:41:14,640 | INFO     | mean y: 2879725.266843972
[2025-11-27 14:41:48] 2025-11-27 19:41:14,641 | INFO     | intersect: -10124252835.387249
[2025-11-27 14:41:48] 2025-11-27 19:41:14,641 | INFO     | chi2: 2.0783703237089513
[2025-11-27 14:41:48] 2025-11-27 19:41:14,642 | INFO     | current chi2=2.0783703237089513 (change=15.012822701919731 %)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,642 | INFO     | right removable region: 1127
[2025-11-27 14:41:48] 2025-11-27 19:41:14,643 | INFO     | sum of square deviations: 450989864822.3072
[2025-11-27 14:41:48] 2025-11-27 19:41:14,668 | INFO     | sum of deviations: 1906821232212.855
[2025-11-27 14:41:48] 2025-11-27 19:41:14,668 | INFO     | mean x: 1764237884.6293027
[2025-11-27 14:41:48] 2025-11-27 19:41:14,668 | INFO     | mean y: 2876837.2091791704
[2025-11-27 14:41:48] 2025-11-27 19:41:14,669 | INFO     | intersect: -7456462095.852918
[2025-11-27 14:41:48] 2025-11-27 19:41:14,670 | INFO     | chi2: 2.5962169077251858
[2025-11-27 14:41:48] 2025-11-27 19:41:14,670 | INFO     | current chi2=2.5962169077251858 (change=41.39145189865324 %)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,672 | INFO     | sum of square deviations: 445045201015.31854
[2025-11-27 14:41:48] 2025-11-27 19:41:14,707 | INFO     | sum of deviations: 1829532741044.102
[2025-11-27 14:41:48] 2025-11-27 19:41:14,707 | INFO     | mean x: 1764238037.1320922
[2025-11-27 14:41:48] 2025-11-27 19:41:14,707 | INFO     | mean y: 2878819.314716312
[2025-11-27 14:41:48] 2025-11-27 19:41:14,707 | INFO     | intersect: -7249713152.38805
[2025-11-27 14:41:48] 2025-11-27 19:41:14,708 | INFO     | chi2: 2.537212575718754
[2025-11-27 14:41:48] 2025-11-27 19:41:14,708 | INFO     | current chi2=2.537212575718754 (change=2.272704250205803 %)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,708 | INFO     | left removable region: 20
[2025-11-27 14:41:48] 2025-11-27 19:41:14,709 | INFO     | sum of square deviations: 420648926094.3417
[2025-11-27 14:41:48] 2025-11-27 19:41:14,733 | INFO     | sum of deviations: 2102385922084.3977
[2025-11-27 14:41:48] 2025-11-27 19:41:14,734 | INFO     | mean x: 1764238006.6422765
[2025-11-27 14:41:48] 2025-11-27 19:41:14,734 | INFO     | mean y: 2891278.5085817524
[2025-11-27 14:41:48] 2025-11-27 19:41:14,734 | INFO     | intersect: -8814697257.398191
[2025-11-27 14:41:48] 2025-11-27 19:41:14,735 | INFO     | chi2: 0.15786364380986442
[2025-11-27 14:41:48] 2025-11-27 19:41:14,735 | INFO     | current memory leak: 5.00 B/s (using 1107 data points, chi2=0.16)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | could have reported an average CPU frequency of 2596 MHz (41 samples)
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | ..............................
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | . Timing measurements:
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | . get job = 0 s
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | . initial setup = 2 s
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | . payload setup = 5 s
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | . stage-in = 0 s
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | . payload execution = 69411 s
[2025-11-27 14:41:48] 2025-11-27 19:41:14,736 | INFO     | . stage-out = 3 s
[2025-11-27 14:41:48] 2025-11-27 19:41:14,737 | INFO     | . log creation = 0 s
[2025-11-27 14:41:48] 2025-11-27 19:41:14,737 | INFO     | ..............................
[2025-11-27 14:41:48] 2025-11-27 19:41:15,052 | INFO     | 
[2025-11-27 14:41:48] 2025-11-27 19:41:15,052 | INFO     | job summary report
[2025-11-27 14:41:48] 2025-11-27 19:41:15,052 | INFO     | --------------------------------------------------
[2025-11-27 14:41:48] 2025-11-27 19:41:15,053 | INFO     | PanDA job id: 6898039443
[2025-11-27 14:41:48] 2025-11-27 19:41:15,053 | INFO     | task id: 47556173
[2025-11-27 14:41:48] 2025-11-27 19:41:15,053 | INFO     | errors: (none)
[2025-11-27 14:41:48] 2025-11-27 19:41:15,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:41:48] 2025-11-27 19:41:15,053 | INFO     | pilot state: finished 
[2025-11-27 14:41:48] 2025-11-27 19:41:15,053 | INFO     | transexitcode: 0
[2025-11-27 14:41:48] 2025-11-27 19:41:15,054 | INFO     | exeerrorcode: 0
[2025-11-27 14:41:48] 2025-11-27 19:41:15,054 | INFO     | exeerrordiag: 
[2025-11-27 14:41:48] 2025-11-27 19:41:15,054 | INFO     | exitcode: 0
[2025-11-27 14:41:48] 2025-11-27 19:41:15,054 | INFO     | exitmsg: OK
[2025-11-27 14:41:48] 2025-11-27 19:41:15,054 | INFO     | cpuconsumptiontime: 534595 s
[2025-11-27 14:41:48] 2025-11-27 19:41:15,054 | INFO     | nevents: 1000
[2025-11-27 14:41:48] 2025-11-27 19:41:15,055 | INFO     | neventsw: 0
[2025-11-27 14:41:48] 2025-11-27 19:41:15,055 | INFO     | pid: 11253
[2025-11-27 14:41:48] 2025-11-27 19:41:15,055 | INFO     | pgrp: 11253
[2025-11-27 14:41:48] 2025-11-27 19:41:15,055 | INFO     | corecount: 8
[2025-11-27 14:41:48] 2025-11-27 19:41:15,055 | INFO     | event service: False
[2025-11-27 14:41:48] 2025-11-27 19:41:15,055 | INFO     | sizes: {0: 2284264, 4: 2284526, 11: 2284554, 69420: 2340812, 69424: 2349806, 69426: 2349862, 69432: 2350332}
[2025-11-27 14:41:48] 2025-11-27 19:41:15,056 | INFO     | --------------------------------------------------
[2025-11-27 14:41:48] 2025-11-27 19:41:15,056 | INFO     | 
[2025-11-27 14:41:48] 2025-11-27 19:41:15,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,075 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:41:48] 2025-11-27 19:41:15,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,075 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:41:48] 2025-11-27 19:41:15,075 | INFO     | job 6898039443 has completed (purged errors)
[2025-11-27 14:41:48] 2025-11-27 19:41:15,075 | INFO     | overall cleanup function is called
[2025-11-27 14:41:48] 2025-11-27 19:41:16,088 | INFO     | --- collectZombieJob: --- 10, [11253]
[2025-11-27 14:41:48] 2025-11-27 19:41:16,088 | INFO     | zombie collector waiting for pid 11253
[2025-11-27 14:41:48] 2025-11-27 19:41:16,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:41:48] 2025-11-27 19:41:16,090 | INFO     | collected zombie processes
[2025-11-27 14:41:48] 2025-11-27 19:41:16,090 | INFO     | will attempt to kill all subprocesses of pid=11253
[2025-11-27 14:41:48] 2025-11-27 19:41:16,206 | INFO     | process IDs to be killed: [11253] (in reverse order)
[2025-11-27 14:41:48] 2025-11-27 19:41:16,252 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:41:48] 2025-11-27 19:41:16,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:41:48] 2025-11-27 19:41:16,255 | INFO     | did not find any defunct processes belonging to 11253
[2025-11-27 14:41:48] 2025-11-27 19:41:16,258 | INFO     | did not find any defunct processes belonging to 11253
[2025-11-27 14:41:48] 2025-11-27 19:41:16,260 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:41:48] 2025-11-27 19:41:16,260 | INFO     | ready for new job
[2025-11-27 14:41:48] 2025-11-27 19:41:16,260 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:41:48] 2025-11-27 19:41:16,265 | INFO     | ***************************************
[2025-11-27 14:41:48] 2025-11-27 19:41:16,266 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:41:48] 2025-11-27 19:41:16,266 | INFO     | ***************************************
[2025-11-27 14:41:48] 2025-11-27 19:41:16,266 | INFO     | 
[2025-11-27 14:41:48] 2025-11-27 19:41:16,267 | INFO     | architecture information:
[2025-11-27 14:41:48] 2025-11-27 19:41:16,267 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:41:48] 2025-11-27 19:41:16,278 | INFO     | cat /etc/os-release:
[2025-11-27 14:41:48] NAME="CentOS Linux"
[2025-11-27 14:41:48] VERSION="7 (Core)"
[2025-11-27 14:41:48] ID="centos"
[2025-11-27 14:41:48] ID_LIKE="rhel fedora"
[2025-11-27 14:41:48] VERSION_ID="7"
[2025-11-27 14:41:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:41:48] ANSI_COLOR="0;31"
[2025-11-27 14:41:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:41:48] HOME_URL="https://www.centos.org/"
[2025-11-27 14:41:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:41:48] 
[2025-11-27 14:41:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:41:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:41:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:41:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:41:48] 
[2025-11-27 14:41:48] 2025-11-27 19:41:16,278 | INFO     | ***************************************
[2025-11-27 14:41:48] 2025-11-27 19:41:16,781 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 14:41:48] 2025-11-27 19:41:16,795 | INFO     | sufficient remaining disk space (26620198912 B)
[2025-11-27 14:41:48] 2025-11-27 19:41:16,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:41:48] 2025-11-27 19:41:16,796 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:41:48] 2025-11-27 19:41:16,796 | INFO     | update_server=False
[2025-11-27 14:41:48] 2025-11-27 19:41:16,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:41:48] 2025-11-27 19:41:16,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:41:48] 2025-11-27 19:41:17,358 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:41:48] 2025-11-27 19:41:17,358 | INFO     | aborting loop
[2025-11-27 14:41:48] 2025-11-27 19:41:17,511 | INFO     | all payload control threads have been joined
[2025-11-27 14:41:48] 2025-11-27 19:41:17,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:41:48] 2025-11-27 19:41:17,634 | INFO     | all data control threads have been joined
[2025-11-27 14:41:48] 2025-11-27 19:41:17,802 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:17,802 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:17,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:17,953 | INFO     | all job control threads have been joined
[2025-11-27 14:41:48] 2025-11-27 19:41:18,054 | INFO     | [job] validate thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,074 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,075 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,351 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,363 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,516 | INFO     | [payload] control thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,639 | INFO     | [data] control thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,798 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,801 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:18,958 | INFO     | [job] control thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:19,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:41:48] 2025-11-27 19:41:19,265 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:19,555 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:23,218 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:41:48] 2025-11-27 19:41:42,269 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:41:48] 2025-11-27 19:41:43,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631368406848)>', '<ExcThread(monitor, started 140630692972288)>']
[2025-11-27 14:41:48] 2025-11-27 19:41:46,615 | INFO     | PID=4588 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 14:41:48] 2025-11-27 19:41:46,616 | INFO     | .. there are 2 such processes running
[2025-11-27 14:41:48] 2025-11-27 19:41:46,616 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:41:48] 2025-11-27 19:41:46,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:41:48] 2025-11-27 19:41:46,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:41:48] 2025-11-27 19:41:46,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:41:48] 2025-11-27 19:41:46,617 | INFO     | [monitor] control thread has ended
[2025-11-27 14:41:48] 2025-11-27 19:41:48,257 | INFO     | all workflow threads have been joined
[2025-11-27 14:41:48] 2025-11-27 19:41:48,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:41:48] 2025-11-27 19:41:48,257 | INFO     | traces error code: 0
[2025-11-27 14:41:48] 2025-11-27 19:41:48,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:41:48] 2025-11-27 19:41:48,346 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:41:48] 2025-11-27 19:41:48,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:41:48] 2025-11-27 19:41:48,351 [wrapper] pilotpid: 4588
[2025-11-27 14:41:48] 2025-11-27 19:41:48,353 [wrapper] Pilot exit status: 0
[2025-11-27 14:41:48] 2025-11-27 19:41:48,361 [wrapper] pandaids: 6898039443
[2025-11-27 14:41:48] 2025-11-27 19:41:48,387 [wrapper] cleanup supervisor_pilot 13699 4589
[2025-11-27 14:41:48] 2025-11-27 19:41:48,390 [wrapper] Test setup, not cleaning
[2025-11-27 14:41:48] 2025-11-27 19:41:48,392 [wrapper] apfmon messages muted
[2025-11-27 14:41:48] 2025-11-27 19:41:48,394 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:41:48] 2025-11-27 19:41:48,395 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:41:48]  *** Error codes and diagnostics ***
[2025-11-27 14:41:48]     "exeErrorCode": 0,
[2025-11-27 14:41:48]     "exeErrorDiag": "",
[2025-11-27 14:41:48]     "pilotErrorCode": 0,
[2025-11-27 14:41:48]     "pilotErrorDiag": "",
[2025-11-27 14:41:48]  *** Listing of results directory ***
[2025-11-27 14:41:48] total 1319148
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 21:56 queuedata.json
[2025-11-27 14:41:48] -rwx------ 1 boincer umatlas     36292 Nov 25 21:56 runpilot2-wrapper.sh
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas       100 Nov 26 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:41:48] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 19:23 run_atlas
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas       105 Nov 26 19:23 job.xml
[2025-11-27 14:41:48] -rw-r--r-- 2 boincer umatlas 409844289 Nov 26 19:23 EVNT.47483658._003156.pool.root.1
[2025-11-27 14:41:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:23 start_atlas.sh
[2025-11-27 14:41:48] drwxrwx--x 2 boincer umatlas      4096 Nov 26 19:23 shared
[2025-11-27 14:41:48] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 19:23 input.tar.gz
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas         0 Nov 26 19:23 boinc_lockfile
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 19:23 pandaJob.out
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas        57 Nov 26 19:23 setup.sh.local
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas    991546 Nov 26 19:23 agis_schedconf.cvmfs.json
[2025-11-27 14:41:48] drwx------ 5 boincer umatlas      4096 Nov 26 19:23 pilot3
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas       533 Nov 27 14:31 boinc_task_state.xml
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 14:39 init_data.xml
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas 913239627 Nov 27 14:40 HITS.47556173._001128.pool.root.1
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas      1067 Nov 27 14:41 memory_monitor_summary.json
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas   1516240 Nov 27 14:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas   2290640 Nov 27 14:41 log.47556173._001128.job.log.tgz.1
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas      8666 Nov 27 14:41 heartbeat.json
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas        29 Nov 27 14:41 wrapper_checkpoint.txt
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 14:41 boinc_mmap_file
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas        95 Nov 27 14:41 pilot_heartbeat.json
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas      4820 Nov 27 14:41 pilotlog.txt
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas   9614124 Nov 27 14:41 log.47556173._001128.job.log.1
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas       353 Nov 27 14:41 output.list
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas       620 Nov 27 14:41 runtime_log
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas  11919360 Nov 27 14:41 result.tar.gz
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 14:41 runtime_log.err
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas       668 Nov 27 14:41 R6ALDmhsKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8oJKDmnXBaVn.diag
[2025-11-27 14:41:48] -rw-r--r-- 1 boincer umatlas     21296 Nov 27 14:41 stderr.txt
[2025-11-27 14:41:48] HITS file was successfully produced:
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas 913239627 Nov 27 14:40 shared/HITS.pool.root.1
[2025-11-27 14:41:48]  *** Contents of shared directory: ***
[2025-11-27 14:41:48] total 1304316
[2025-11-27 14:41:48] -rw-r--r-- 2 boincer umatlas 409844289 Nov 26 19:23 ATLAS.root_0
[2025-11-27 14:41:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:23 start_atlas.sh
[2025-11-27 14:41:48] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 19:23 input.tar.gz
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas 913239627 Nov 27 14:40 HITS.pool.root.1
[2025-11-27 14:41:48] -rw------- 1 boincer umatlas  11919360 Nov 27 14:41 result.tar.gz
14:41:50 (690): run_atlas exited; CPU time 533279.799367
14:41:50 (690): called boinc_finish(0)

</stderr_txt>
]]>

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