Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:51 (4011497): wrapper (7.7.26015): starting
00:03:51 (4011497): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:03:51] Arguments: --nthreads 9
[2025-11-27 00:03:51] Threads: 9
[2025-11-27 00:03:51] Checking for CVMFS
[2025-11-27 00:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:54] 2.13.3.0 12601 31046 379176 153347 2 558 16739456 32935937 45092 16776704 0 152561164 99.504 188023571 33698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:54] CVMFS is ok
[2025-11-27 00:03:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:54] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:54] Checking for apptainer binary...
[2025-11-27 00:03:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:54] Running /usr/bin/apptainer --version
[2025-11-27 00:03:54] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:55] c6-12-27-4.aglt2.org
[2025-11-27 00:03:55] apptainer works
[2025-11-27 00:03:55] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:03:55] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:03:55] Starting ATLAS job with PandaID=6898039673
[2025-11-27 00:03:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:25:13]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:25:13] 2025-11-27 21:24:16,075 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:25:13] 2025-11-27 21:24:16,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:25:13] 2025-11-27 21:24:16,113 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:25:13] 2025-11-27 21:24:16,115 | INFO     | sum of square deviations: 274352746147.22443
[2025-11-27 16:25:13] 2025-11-27 21:24:16,135 | INFO     | sum of deviations: 2838215417816.511
[2025-11-27 16:25:13] 2025-11-27 21:24:16,135 | INFO     | mean x: 1764249343.2135417
[2025-11-27 16:25:13] 2025-11-27 21:24:16,136 | INFO     | mean y: 2990729.714583333
[2025-11-27 16:25:13] 2025-11-27 21:24:16,136 | INFO     | intersect: -18248401892.00999
[2025-11-27 16:25:13] 2025-11-27 21:24:16,137 | INFO     | chi2: 13.265800639901125
[2025-11-27 16:25:13] 2025-11-27 21:24:16,138 | INFO     | sum of square deviations: 270090115698.1469
[2025-11-27 16:25:13] 2025-11-27 21:24:16,155 | INFO     | sum of deviations: 3186404212569.632
[2025-11-27 16:25:13] 2025-11-27 21:24:16,155 | INFO     | mean x: 1764249190.7434554
[2025-11-27 16:25:13] 2025-11-27 21:24:16,155 | INFO     | mean y: 3003187.7413612567
[2025-11-27 16:25:13] 2025-11-27 21:24:16,155 | INFO     | intersect: -20810831627.636448
[2025-11-27 16:25:13] 2025-11-27 21:24:16,156 | INFO     | chi2: 9.92918538877807
[2025-11-27 16:25:13] 2025-11-27 21:24:16,156 | INFO     | current chi2=9.92918538877807 (change=25.152008097326 %)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,158 | INFO     | sum of square deviations: 265871904684.84247
[2025-11-27 16:25:13] 2025-11-27 21:24:16,174 | INFO     | sum of deviations: 3283234087351.7046
[2025-11-27 16:25:13] 2025-11-27 21:24:16,175 | INFO     | mean x: 1764249038.2736843
[2025-11-27 16:25:13] 2025-11-27 21:24:16,175 | INFO     | mean y: 3006681.6242105262
[2025-11-27 16:25:13] 2025-11-27 21:24:16,175 | INFO     | intersect: -21783584827.18463
[2025-11-27 16:25:13] 2025-11-27 21:24:16,176 | INFO     | chi2: 9.43590959156225
[2025-11-27 16:25:13] 2025-11-27 21:24:16,176 | INFO     | current chi2=9.43590959156225 (change=4.967938233617008 %)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,176 | INFO     | right removable region: 949
[2025-11-27 16:25:13] 2025-11-27 21:24:16,177 | INFO     | sum of square deviations: 270086769848.14682
[2025-11-27 16:25:13] 2025-11-27 21:24:16,194 | INFO     | sum of deviations: 2430384815628.317
[2025-11-27 16:25:13] 2025-11-27 21:24:16,194 | INFO     | mean x: 1764249495.7434554
[2025-11-27 16:25:13] 2025-11-27 21:24:16,195 | INFO     | mean y: 3005309.0910994764
[2025-11-27 16:25:13] 2025-11-27 21:24:16,195 | INFO     | intersect: -15872652679.804758
[2025-11-27 16:25:13] 2025-11-27 21:24:16,196 | INFO     | chi2: 8.842242096305373
[2025-11-27 16:25:13] 2025-11-27 21:24:16,196 | INFO     | current chi2=8.842242096305373 (change=33.34558285378184 %)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,197 | INFO     | sum of square deviations: 265865212984.8422
[2025-11-27 16:25:13] 2025-11-27 21:24:16,214 | INFO     | sum of deviations: 2072724454232.019
[2025-11-27 16:25:13] 2025-11-27 21:24:16,214 | INFO     | mean x: 1764249648.2736843
[2025-11-27 16:25:13] 2025-11-27 21:24:16,214 | INFO     | mean y: 3018230.8768421053
[2025-11-27 16:25:13] 2025-11-27 21:24:16,214 | INFO     | intersect: -13751332510.585485
[2025-11-27 16:25:13] 2025-11-27 21:24:16,216 | INFO     | chi2: 5.5923408753518835
[2025-11-27 16:25:13] 2025-11-27 21:24:16,216 | INFO     | current chi2=5.5923408753518835 (change=36.75426645818058 %)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,217 | INFO     | sum of square deviations: 261687900711.39078
[2025-11-27 16:25:13] 2025-11-27 21:24:16,234 | INFO     | sum of deviations: 1844217598527.4465
[2025-11-27 16:25:13] 2025-11-27 21:24:16,234 | INFO     | mean x: 1764249800.8031745
[2025-11-27 16:25:13] 2025-11-27 21:24:16,234 | INFO     | mean y: 3026568.7174603175
[2025-11-27 16:25:13] 2025-11-27 21:24:16,234 | INFO     | intersect: -12430335929.108295
[2025-11-27 16:25:13] 2025-11-27 21:24:16,236 | INFO     | chi2: 4.317954644692756
[2025-11-27 16:25:13] 2025-11-27 21:24:16,236 | INFO     | current chi2=4.317954644692756 (change=22.788064230418353 %)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,236 | INFO     | left removable region: 30
[2025-11-27 16:25:13] 2025-11-27 21:24:16,237 | INFO     | sum of square deviations: 240679871053.97192
[2025-11-27 16:25:13] 2025-11-27 21:24:16,253 | INFO     | sum of deviations: 2045863329973.5725
[2025-11-27 16:25:13] 2025-11-27 21:24:16,253 | INFO     | mean x: 1764249922.8955386
[2025-11-27 16:25:13] 2025-11-27 21:24:16,253 | INFO     | mean y: 3052183.7247007615
[2025-11-27 16:25:13] 2025-11-27 21:24:16,253 | INFO     | intersect: -14993691026.891703
[2025-11-27 16:25:13] 2025-11-27 21:24:16,255 | INFO     | chi2: 0.18127263743565222
[2025-11-27 16:25:13] 2025-11-27 21:24:16,255 | INFO     | current memory leak: 8.50 B/s (using 919 data points, chi2=0.18)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | could have reported an average CPU frequency of 2620 MHz (35 samples)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | ..............................
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | . Timing measurements:
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | . get job = 0 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | . initial setup = 8 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | . payload setup = 51 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | . stage-in = 0 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,256 | INFO     | . payload execution = 58577 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,257 | INFO     | . stage-out = 5 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,257 | INFO     | . log creation = 0 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,257 | INFO     | ..............................
[2025-11-27 16:25:13] 2025-11-27 21:24:16,410 | INFO     | 
[2025-11-27 16:25:13] 2025-11-27 21:24:16,410 | INFO     | job summary report
[2025-11-27 16:25:13] 2025-11-27 21:24:16,410 | INFO     | --------------------------------------------------
[2025-11-27 16:25:13] 2025-11-27 21:24:16,410 | INFO     | PanDA job id: 6898039673
[2025-11-27 16:25:13] 2025-11-27 21:24:16,410 | INFO     | task id: 47556161
[2025-11-27 16:25:13] 2025-11-27 21:24:16,410 | INFO     | errors: (none)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | pilot state: finished 
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | transexitcode: 0
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | exeerrorcode: 0
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | exeerrordiag: 
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | exitcode: 0
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | exitmsg: OK
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | cpuconsumptiontime: 263172 s
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | nevents: 1000
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | neventsw: 0
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | pid: 4047892
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | pgrp: 4047892
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | corecount: 9
[2025-11-27 16:25:13] 2025-11-27 21:24:16,411 | INFO     | event service: False
[2025-11-27 16:25:13] 2025-11-27 21:24:16,412 | INFO     | sizes: {0: 2283436, 1: 2284037, 2: 2284149, 3: 2284149, 4: 2284348, 14: 2284376, 26: 2284532, 37: 2284850, 48: 2284850, 58632: 2336211, 58633: 2336210, 58638: 2345
[2025-11-27 16:25:13] 2025-11-27 21:24:16,412 | INFO     | --------------------------------------------------
[2025-11-27 16:25:13] 2025-11-27 21:24:16,412 | INFO     | 
[2025-11-27 16:25:13] 2025-11-27 21:24:16,412 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 16:25:13] 2025-11-27 21:24:16,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,503 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,503 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,503 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,503 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,503 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,503 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,504 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,505 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:25:13] 2025-11-27 21:24:16,505 | INFO     | job 6898039673 has completed (purged errors)
[2025-11-27 16:25:13] 2025-11-27 21:24:16,505 | INFO     | overall cleanup function is called
[2025-11-27 16:25:13] 2025-11-27 21:24:17,551 | INFO     | --- collectZombieJob: --- 10, [4047892]
[2025-11-27 16:25:13] 2025-11-27 21:24:17,551 | INFO     | zombie collector waiting for pid 4047892
[2025-11-27 16:25:13] 2025-11-27 21:24:17,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:25:13] 2025-11-27 21:24:17,552 | INFO     | collected zombie processes
[2025-11-27 16:25:13] 2025-11-27 21:24:17,552 | INFO     | will attempt to kill all subprocesses of pid=4047892
[2025-11-27 16:25:13] 2025-11-27 21:24:18,268 | INFO     | process IDs to be killed: [4047892] (in reverse order)
[2025-11-27 16:25:13] 2025-11-27 21:24:18,482 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:25:13] 2025-11-27 21:24:18,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:25:13] 2025-11-27 21:24:18,534 | INFO     | did not find any defunct processes belonging to 4047892
[2025-11-27 16:25:13] 2025-11-27 21:24:18,556 | INFO     | did not find any defunct processes belonging to 4047892
[2025-11-27 16:25:13] 2025-11-27 21:24:18,558 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:25:13] 2025-11-27 21:24:18,558 | INFO     | ready for new job
[2025-11-27 16:25:13] 2025-11-27 21:24:18,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:25:13] 2025-11-27 21:24:18,562 | INFO     | ***************************************
[2025-11-27 16:25:13] 2025-11-27 21:24:18,562 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:25:13] 2025-11-27 21:24:18,562 | INFO     | ***************************************
[2025-11-27 16:25:13] 2025-11-27 21:24:18,562 | INFO     | 
[2025-11-27 16:25:13] 2025-11-27 21:24:18,568 | INFO     | architecture information:
[2025-11-27 16:25:13] 2025-11-27 21:24:18,568 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:25:13] 2025-11-27 21:24:18,588 | INFO     | cat /etc/os-release:
[2025-11-27 16:25:13] NAME="CentOS Linux"
[2025-11-27 16:25:13] VERSION="7 (Core)"
[2025-11-27 16:25:13] ID="centos"
[2025-11-27 16:25:13] ID_LIKE="rhel fedora"
[2025-11-27 16:25:13] VERSION_ID="7"
[2025-11-27 16:25:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:25:13] ANSI_COLOR="0;31"
[2025-11-27 16:25:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:25:13] HOME_URL="https://www.centos.org/"
[2025-11-27 16:25:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:25:13] 
[2025-11-27 16:25:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:25:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:25:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:25:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:25:13] 
[2025-11-27 16:25:13] 2025-11-27 21:24:18,588 | INFO     | ***************************************
[2025-11-27 16:25:13] 2025-11-27 21:24:19,091 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 16:25:13] 2025-11-27 21:24:19,209 | INFO     | sufficient remaining disk space (87448092672 B)
[2025-11-27 16:25:13] 2025-11-27 21:24:19,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:25:13] 2025-11-27 21:24:19,210 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:25:13] 2025-11-27 21:24:19,210 | INFO     | update_server=False
[2025-11-27 16:25:13] 2025-11-27 21:24:19,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:25:13] 2025-11-27 21:24:19,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:25:13] 2025-11-27 21:24:19,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:25:13] 2025-11-27 21:24:19,211 | INFO     | aborting loop
[2025-11-27 16:25:13] 2025-11-27 21:24:19,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:25:13] 2025-11-27 21:24:19,841 | INFO     | all payload control threads have been joined
[2025-11-27 16:25:13] 2025-11-27 21:24:19,841 | INFO     | all data control threads have been joined
[2025-11-27 16:25:13] 2025-11-27 21:24:20,216 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,217 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,460 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,544 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,551 | INFO     | all job control threads have been joined
[2025-11-27 16:25:13] 2025-11-27 21:24:20,672 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,700 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,847 | INFO     | [payload] control thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,851 | INFO     | [data] control thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:20,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:21,150 | INFO     | [job] validate thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:21,167 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:21,374 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:21,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:25:13] 2025-11-27 21:24:21,485 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:21,557 | INFO     | [job] control thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:22,430 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:23,223 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:25:13] 2025-11-27 21:24:49,752 | INFO     | PID=4020842 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:25:13] 2025-11-27 21:24:49,752 | INFO     | .. there are 52 such processes running
[2025-11-27 16:25:13] 2025-11-27 21:24:49,752 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:25:13] 2025-11-27 21:24:49,752 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:25:13] 2025-11-27 21:24:49,752 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:25:13] 2025-11-27 21:25:06,738 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:25:13] 2025-11-27 21:25:08,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226053056320)>', '<ExcThread(monitor, started 140225539974912)>']
[2025-11-27 16:25:13] 2025-11-27 21:25:08,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:25:13] 2025-11-27 21:25:08,884 | INFO     | [monitor] control thread has ended
[2025-11-27 16:25:13] 2025-11-27 21:25:13,273 | INFO     | all workflow threads have been joined
[2025-11-27 16:25:13] 2025-11-27 21:25:13,273 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:25:13] 2025-11-27 21:25:13,274 | INFO     | traces error code: 0
[2025-11-27 16:25:13] 2025-11-27 21:25:13,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:25:13] 2025-11-27 21:25:13,472 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:25:13] 2025-11-27 21:25:13,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:25:13] 2025-11-27 21:25:13,492 [wrapper] pilotpid: 4020842
[2025-11-27 16:25:13] 2025-11-27 21:25:13,496 [wrapper] Pilot exit status: 0
[2025-11-27 16:25:13] 2025-11-27 21:25:13,563 [wrapper] pandaids: 6898039673
[2025-11-27 16:25:13] 2025-11-27 21:25:13,729 [wrapper] cleanup supervisor_pilot  128619 4020843
[2025-11-27 16:25:13] 2025-11-27 21:25:13,737 [wrapper] Test setup, not cleaning
[2025-11-27 16:25:13] 2025-11-27 21:25:13,740 [wrapper] apfmon messages muted
[2025-11-27 16:25:13] 2025-11-27 21:25:13,743 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:25:13] 2025-11-27 21:25:13,748 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:25:13]  *** Error codes and diagnostics ***
[2025-11-27 16:25:13]     "exeErrorCode": 0,
[2025-11-27 16:25:13]     "exeErrorDiag": "",
[2025-11-27 16:25:13]     "pilotErrorCode": 0,
[2025-11-27 16:25:13]     "pilotErrorDiag": "",
[2025-11-27 16:25:13]  *** Listing of results directory ***
[2025-11-27 16:25:13] total 1313080
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 16:25:13] -rwx------. 1 boincer umatlas     36292 Nov 25 22:02 runpilot2-wrapper.sh
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:02 queuedata.json
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:25:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 16:25:13] -rw-r--r--. 2 boincer umatlas 409290631 Nov 27 00:03 EVNT.47483658._002403.pool.root.1
[2025-11-27 16:25:13] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:03 input.tar.gz
[2025-11-27 16:25:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 16:25:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:03 pandaJob.out
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 16:25:13] drwx------. 5 boincer umatlas      4096 Nov 27 00:05 pilot3
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas       533 Nov 27 16:13 boinc_task_state.xml
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas      6880 Nov 27 16:21 init_data.xml
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas 912804037 Nov 27 16:23 HITS.47556161._003853.pool.root.1
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas      1059 Nov 27 16:23 memory_monitor_summary.json
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:23 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas   2212882 Nov 27 16:24 log.47556161._003853.job.log.tgz.1
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas        95 Nov 27 16:24 pilot_heartbeat.json
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas      8626 Nov 27 16:24 heartbeat.json
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 16:25 boinc_mmap_file
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas        29 Nov 27 16:25 wrapper_checkpoint.txt
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas      4824 Nov 27 16:25 pilotlog.txt
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas   7072657 Nov 27 16:25 log.47556161._003853.job.log.1
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas       353 Nov 27 16:25 output.list
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:25 runtime_log
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas   9308160 Nov 27 16:25 result.tar.gz
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 16:25 runtime_log.err
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas       662 Nov 27 16:25 EHyLDmeyKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSpJKDmHMdT9m.diag
[2025-11-27 16:25:13] -rw-r--r--. 1 boincer umatlas     21179 Nov 27 16:25 stderr.txt
[2025-11-27 16:25:13] HITS file was successfully produced:
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas 912804037 Nov 27 16:23 shared/HITS.pool.root.1
[2025-11-27 16:25:13]  *** Contents of shared directory: ***
[2025-11-27 16:25:13] total 1300808
[2025-11-27 16:25:13] -rw-r--r--. 2 boincer umatlas 409290631 Nov 27 00:03 ATLAS.root_0
[2025-11-27 16:25:13] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:03 input.tar.gz
[2025-11-27 16:25:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas 912804037 Nov 27 16:23 HITS.pool.root.1
[2025-11-27 16:25:13] -rw-------. 1 boincer umatlas   9308160 Nov 27 16:25 result.tar.gz
16:25:15 (4011497): run_atlas exited; CPU time 265952.951599
16:25:15 (4011497): called boinc_finish(0)

</stderr_txt>
]]>

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