Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:34:03 (21440): wrapper (7.7.26015): starting
19:34:03 (21440): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:34:03] Arguments: --nthreads 8
[2025-11-26 19:34:03] Threads: 8
[2025-11-26 19:34:03] Checking for CVMFS
[2025-11-26 19:34:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:34:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:34:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:34:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:34:04] 2.11.2.0 2830 49590 84436 153341 0 81 18634253 20275201 1 130560 0 9379216 99.740 3046010 27539 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 19:34:04] CVMFS is ok
[2025-11-26 19:34:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:34:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:34:04] Further information can be found at the LHC@home message board.
[2025-11-26 19:34:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:34:04] Checking for apptainer binary...
[2025-11-26 19:34:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:34:04] Running /usr/bin/apptainer --version
[2025-11-26 19:34:04] apptainer version 1.3.2-1.el7
[2025-11-26 19:34:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:34:04] c-204-5.aglt2.org
[2025-11-26 19:34:04] apptainer works
[2025-11-26 19:34:05] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:34:05] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:34:05] Starting ATLAS job with PandaID=6897998759
[2025-11-26 19:34:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:07:42]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:07:42] 2025-11-27 13:06:53,929 | INFO     | monitor loop #3321: job 0:6897998759 is in state 'finished'
[2025-11-27 08:07:42] 2025-11-27 13:06:53,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:07:42] 2025-11-27 13:06:54,251 | INFO     | time since job start (45152s) is within the limit (172800.0s)
[2025-11-27 08:07:42] 2025-11-27 13:06:55,368 | INFO     | PID=25194 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 08:07:42] 2025-11-27 13:06:55,963 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 08:07:42] 2025-11-27 13:06:55,966 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-27 08:07:42] 2025-11-27 13:06:55,968 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897998759/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:07:42] 2025-11-27 13:06:55,969 | INFO     | extracted standard info from prmon json
[2025-11-27 08:07:42] 2025-11-27 13:06:55,969 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:07:42] 2025-11-27 13:06:55,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:07:42] 2025-11-27 13:06:55,983 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:07:42] 2025-11-27 13:06:55,984 | INFO     | sum of square deviations: 125653092232.19485
[2025-11-27 08:07:42] 2025-11-27 13:06:55,995 | INFO     | sum of deviations: 882146000620.1722
[2025-11-27 08:07:42] 2025-11-27 13:06:55,995 | INFO     | mean x: 1764226233.1027026
[2025-11-27 08:07:42] 2025-11-27 13:06:55,995 | INFO     | mean y: 3009201.0635135137
[2025-11-27 08:07:42] 2025-11-27 13:06:55,996 | INFO     | intersect: -12382719538.861473
[2025-11-27 08:07:42] 2025-11-27 13:06:55,996 | INFO     | chi2: 5.391572127260048
[2025-11-27 08:07:42] 2025-11-27 13:06:55,997 | INFO     | sum of square deviations: 123123376175.36595
[2025-11-27 08:07:42] 2025-11-27 13:06:56,008 | INFO     | sum of deviations: 1120306561523.9272
[2025-11-27 08:07:42] 2025-11-27 13:06:56,008 | INFO     | mean x: 1764226080.6068027
[2025-11-27 08:07:42] 2025-11-27 13:06:56,008 | INFO     | mean y: 3023544.854421769
[2025-11-27 08:07:42] 2025-11-27 13:06:56,009 | INFO     | intersect: -16049769316.351145
[2025-11-27 08:07:42] 2025-11-27 13:06:56,009 | INFO     | chi2: 2.6097995705065977
[2025-11-27 08:07:42] 2025-11-27 13:06:56,010 | INFO     | current chi2=2.6097995705065977 (change=51.59483154623258 %)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,010 | INFO     | sum of square deviations: 120627802093.23305
[2025-11-27 08:07:42] 2025-11-27 13:06:56,021 | INFO     | sum of deviations: 1139500077513.726
[2025-11-27 08:07:42] 2025-11-27 13:06:56,021 | INFO     | mean x: 1764225928.109589
[2025-11-27 08:07:42] 2025-11-27 13:06:56,022 | INFO     | mean y: 3024709.6534246574
[2025-11-27 08:07:42] 2025-11-27 13:06:56,022 | INFO     | intersect: -16662582612.602325
[2025-11-27 08:07:42] 2025-11-27 13:06:56,022 | INFO     | chi2: 2.497033363442447
[2025-11-27 08:07:42] 2025-11-27 13:06:56,023 | INFO     | current chi2=2.497033363442447 (change=4.320876144609887 %)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,023 | INFO     | right removable region: 729
[2025-11-27 08:07:42] 2025-11-27 13:06:56,023 | INFO     | sum of square deviations: 123123104115.36598
[2025-11-27 08:07:42] 2025-11-27 13:06:56,035 | INFO     | sum of deviations: 667227373469.3738
[2025-11-27 08:07:42] 2025-11-27 13:06:56,035 | INFO     | mean x: 1764226385.6068027
[2025-11-27 08:07:42] 2025-11-27 13:06:56,035 | INFO     | mean y: 3022133.925170068
[2025-11-27 08:07:42] 2025-11-27 13:06:56,035 | INFO     | intersect: -9557654117.144789
[2025-11-27 08:07:42] 2025-11-27 13:06:56,036 | INFO     | chi2: 3.0479593353987875
[2025-11-27 08:07:42] 2025-11-27 13:06:56,036 | INFO     | current chi2=3.0479593353987875 (change=43.46807826258767 %)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,037 | INFO     | sum of square deviations: 120627436947.66565
[2025-11-27 08:07:42] 2025-11-27 13:06:56,048 | INFO     | sum of deviations: 621004329268.5867
[2025-11-27 08:07:42] 2025-11-27 13:06:56,048 | INFO     | mean x: 1764226538.1068494
[2025-11-27 08:07:42] 2025-11-27 13:06:56,048 | INFO     | mean y: 3024956.902739726
[2025-11-27 08:07:42] 2025-11-27 13:06:56,048 | INFO     | intersect: -9079422168.706078
[2025-11-27 08:07:42] 2025-11-27 13:06:56,049 | INFO     | chi2: 3.002190672247242
[2025-11-27 08:07:42] 2025-11-27 13:06:56,049 | INFO     | current chi2=3.002190672247242 (change=1.5016165937646022 %)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,049 | INFO     | left removable region: 20
[2025-11-27 08:07:42] 2025-11-27 13:06:56,050 | INFO     | sum of square deviations: 110513784347.4161
[2025-11-27 08:07:42] 2025-11-27 13:06:56,060 | INFO     | sum of deviations: 822671385278.8993
[2025-11-27 08:07:42] 2025-11-27 13:06:56,060 | INFO     | mean x: 1764226507.6177716
[2025-11-27 08:07:42] 2025-11-27 13:06:56,060 | INFO     | mean y: 3044125.4682651623
[2025-11-27 08:07:42] 2025-11-27 13:06:56,060 | INFO     | intersect: -13129966145.94772
[2025-11-27 08:07:42] 2025-11-27 13:06:56,061 | INFO     | chi2: 0.07319583229615863
[2025-11-27 08:07:42] 2025-11-27 13:06:56,061 | INFO     | current memory leak: 7.44 B/s (using 709 data points, chi2=0.07)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,062 | INFO     | could have reported an average CPU frequency of 2160 MHz (28 samples)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,062 | INFO     | ..............................
[2025-11-27 08:07:42] 2025-11-27 13:06:56,062 | INFO     | . Timing measurements:
[2025-11-27 08:07:42] 2025-11-27 13:06:56,062 | INFO     | . get job = 0 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,062 | INFO     | . initial setup = 2 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,062 | INFO     | . payload setup = 8 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,063 | INFO     | . stage-in = 0 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,063 | INFO     | . payload execution = 45113 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,063 | INFO     | . stage-out = 3 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,063 | INFO     | . log creation = 0 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,063 | INFO     | ..............................
[2025-11-27 08:07:42] 2025-11-27 13:06:56,151 | INFO     | 
[2025-11-27 08:07:42] 2025-11-27 13:06:56,151 | INFO     | job summary report
[2025-11-27 08:07:42] 2025-11-27 13:06:56,151 | INFO     | --------------------------------------------------
[2025-11-27 08:07:42] 2025-11-27 13:06:56,151 | INFO     | PanDA job id: 6897998759
[2025-11-27 08:07:42] 2025-11-27 13:06:56,151 | INFO     | task id: 47556161
[2025-11-27 08:07:42] 2025-11-27 13:06:56,152 | INFO     | errors: (none)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,152 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:07:42] 2025-11-27 13:06:56,152 | INFO     | pilot state: finished 
[2025-11-27 08:07:42] 2025-11-27 13:06:56,152 | INFO     | transexitcode: 0
[2025-11-27 08:07:42] 2025-11-27 13:06:56,152 | INFO     | exeerrorcode: 0
[2025-11-27 08:07:42] 2025-11-27 13:06:56,152 | INFO     | exeerrordiag: 
[2025-11-27 08:07:42] 2025-11-27 13:06:56,153 | INFO     | exitcode: 0
[2025-11-27 08:07:42] 2025-11-27 13:06:56,153 | INFO     | exitmsg: OK
[2025-11-27 08:07:42] 2025-11-27 13:06:56,153 | INFO     | cpuconsumptiontime: 350697 s
[2025-11-27 08:07:42] 2025-11-27 13:06:56,153 | INFO     | nevents: 1000
[2025-11-27 08:07:42] 2025-11-27 13:06:56,153 | INFO     | neventsw: 0
[2025-11-27 08:07:42] 2025-11-27 13:06:56,153 | INFO     | pid: 32569
[2025-11-27 08:07:42] 2025-11-27 13:06:56,154 | INFO     | pgrp: 32569
[2025-11-27 08:07:42] 2025-11-27 13:06:56,154 | INFO     | corecount: 8
[2025-11-27 08:07:42] 2025-11-27 13:06:56,154 | INFO     | event service: False
[2025-11-27 08:07:42] 2025-11-27 13:06:56,154 | INFO     | sizes: {0: 2283436, 1: 2284292, 7: 2284554, 12: 2284582, 45126: 2330563, 45130: 2339557, 45131: 2339741, 45137: 2339987}
[2025-11-27 08:07:42] 2025-11-27 13:06:56,154 | INFO     | --------------------------------------------------
[2025-11-27 08:07:42] 2025-11-27 13:06:56,154 | INFO     | 
[2025-11-27 08:07:42] 2025-11-27 13:06:56,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 08:07:42] 2025-11-27 13:06:56,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,183 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:07:42] 2025-11-27 13:06:56,187 | INFO     | job 6897998759 has completed (purged errors)
[2025-11-27 08:07:42] 2025-11-27 13:06:56,187 | INFO     | overall cleanup function is called
[2025-11-27 08:07:42] 2025-11-27 13:06:57,202 | INFO     | --- collectZombieJob: --- 10, [32569]
[2025-11-27 08:07:42] 2025-11-27 13:06:57,202 | INFO     | zombie collector waiting for pid 32569
[2025-11-27 08:07:42] 2025-11-27 13:06:57,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:07:42] 2025-11-27 13:06:57,203 | INFO     | collected zombie processes
[2025-11-27 08:07:42] 2025-11-27 13:06:57,203 | INFO     | will attempt to kill all subprocesses of pid=32569
[2025-11-27 08:07:42] 2025-11-27 13:06:57,293 | INFO     | process IDs to be killed: [32569] (in reverse order)
[2025-11-27 08:07:42] 2025-11-27 13:06:57,351 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:07:42] 2025-11-27 13:06:57,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:07:42] 2025-11-27 13:06:57,356 | INFO     | did not find any defunct processes belonging to 32569
[2025-11-27 08:07:42] 2025-11-27 13:06:57,360 | INFO     | did not find any defunct processes belonging to 32569
[2025-11-27 08:07:42] 2025-11-27 13:06:57,362 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:07:42] 2025-11-27 13:06:57,362 | INFO     | ready for new job
[2025-11-27 08:07:42] 2025-11-27 13:06:57,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:07:42] 2025-11-27 13:06:57,366 | INFO     | ***************************************
[2025-11-27 08:07:42] 2025-11-27 13:06:57,366 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:07:42] 2025-11-27 13:06:57,366 | INFO     | ***************************************
[2025-11-27 08:07:42] 2025-11-27 13:06:57,366 | INFO     | 
[2025-11-27 08:07:42] 2025-11-27 13:06:57,367 | INFO     | architecture information:
[2025-11-27 08:07:42] 2025-11-27 13:06:57,368 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:07:42] 2025-11-27 13:06:57,386 | INFO     | cat /etc/os-release:
[2025-11-27 08:07:42] NAME="CentOS Linux"
[2025-11-27 08:07:42] VERSION="7 (Core)"
[2025-11-27 08:07:42] ID="centos"
[2025-11-27 08:07:42] ID_LIKE="rhel fedora"
[2025-11-27 08:07:42] VERSION_ID="7"
[2025-11-27 08:07:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:07:42] ANSI_COLOR="0;31"
[2025-11-27 08:07:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:07:42] HOME_URL="https://www.centos.org/"
[2025-11-27 08:07:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:07:42] 
[2025-11-27 08:07:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:07:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:07:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:07:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:07:42] 
[2025-11-27 08:07:42] 2025-11-27 13:06:57,386 | INFO     | ***************************************
[2025-11-27 08:07:42] 2025-11-27 13:06:57,889 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 08:07:42] 2025-11-27 13:06:57,909 | INFO     | sufficient remaining disk space (17456693248 B)
[2025-11-27 08:07:42] 2025-11-27 13:06:57,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:07:42] 2025-11-27 13:06:57,909 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:07:42] 2025-11-27 13:06:57,909 | INFO     | update_server=False
[2025-11-27 08:07:42] 2025-11-27 13:06:57,910 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:07:42] 2025-11-27 13:06:57,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:07:42] 2025-11-27 13:06:57,910 | INFO     | aborting loop
[2025-11-27 08:07:42] 2025-11-27 13:06:57,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:07:42] 2025-11-27 13:06:57,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:07:42] 2025-11-27 13:06:58,309 | INFO     | all job control threads have been joined
[2025-11-27 08:07:42] 2025-11-27 13:06:58,402 | INFO     | all data control threads have been joined
[2025-11-27 08:07:42] 2025-11-27 13:06:58,915 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:58,916 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:58,916 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,022 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,283 | INFO     | all payload control threads have been joined
[2025-11-27 08:07:42] 2025-11-27 13:06:59,315 | INFO     | [job] control thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,365 | INFO     | [job] validate thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,407 | INFO     | [data] control thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,425 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,596 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,635 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,917 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:06:59,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:07:42] 2025-11-27 13:07:00,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:07:00,204 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:07:00,288 | INFO     | [payload] control thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:07:00,470 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:07:03,954 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:07:42] 2025-11-27 13:07:27,579 | INFO     | PID=25194 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 08:07:42] 2025-11-27 13:07:27,580 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:07:42] 2025-11-27 13:07:27,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:07:42] 2025-11-27 13:07:27,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:07:42] 2025-11-27 13:07:36,625 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:07:42] 2025-11-27 13:07:36,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930677872448)>', '<ExcThread(monitor, started 139929430521600)>']
[2025-11-27 08:07:42] 2025-11-27 13:07:37,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:07:42] 2025-11-27 13:07:37,631 | INFO     | [monitor] control thread has ended
[2025-11-27 08:07:42] 2025-11-27 13:07:41,884 | INFO     | all workflow threads have been joined
[2025-11-27 08:07:42] 2025-11-27 13:07:41,885 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:07:42] 2025-11-27 13:07:41,885 | INFO     | traces error code: 0
[2025-11-27 08:07:42] 2025-11-27 13:07:41,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:07:42] 2025-11-27 13:07:41,989 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:07:42] 2025-11-27 13:07:41,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:07:42] 2025-11-27 13:07:41,998 [wrapper] pilotpid: 25194
[2025-11-27 08:07:42] 2025-11-27 13:07:42,002 [wrapper] Pilot exit status: 0
[2025-11-27 08:07:42] 2025-11-27 13:07:42,019 [wrapper] pandaids: 6897998759
[2025-11-27 08:07:42] 2025-11-27 13:07:42,065 [wrapper] cleanup supervisor_pilot 21603 25195
[2025-11-27 08:07:42] 2025-11-27 13:07:42,070 [wrapper] Test setup, not cleaning
[2025-11-27 08:07:42] 2025-11-27 13:07:42,075 [wrapper] apfmon messages muted
[2025-11-27 08:07:42] 2025-11-27 13:07:42,079 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:07:42] 2025-11-27 13:07:42,084 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:07:42]  *** Error codes and diagnostics ***
[2025-11-27 08:07:42]     "exeErrorCode": 0,
[2025-11-27 08:07:42]     "exeErrorDiag": "",
[2025-11-27 08:07:42]     "pilotErrorCode": 0,
[2025-11-27 08:07:42]     "pilotErrorDiag": "",
[2025-11-27 08:07:42]  *** Listing of results directory ***
[2025-11-27 08:07:42] total 1324332
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 08:07:42] -rwx------ 1 boincer umatlas     36292 Nov 25 21:32 runpilot2-wrapper.sh
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 21:32 queuedata.json
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas       100 Nov 26 19:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:07:42] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 19:34 run_atlas
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas       105 Nov 26 19:34 job.xml
[2025-11-27 08:07:42] -rw-r--r-- 2 boincer umatlas 410752273 Nov 26 19:34 EVNT.47483658._002379.pool.root.1
[2025-11-27 08:07:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:34 start_atlas.sh
[2025-11-27 08:07:42] drwxrwx--x 2 boincer umatlas      4096 Nov 26 19:34 shared
[2025-11-27 08:07:42] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 19:34 input.tar.gz
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas         0 Nov 26 19:34 boinc_lockfile
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 19:34 pandaJob.out
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas        57 Nov 26 19:34 setup.sh.local
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas    991546 Nov 26 19:34 agis_schedconf.cvmfs.json
[2025-11-27 08:07:42] drwx------ 5 boincer umatlas      4096 Nov 26 19:34 pilot3
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas       532 Nov 27 07:58 boinc_task_state.xml
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas      5912 Nov 27 08:01 init_data.xml
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas 925035178 Nov 27 08:06 HITS.47556161._003613.pool.root.1
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas        95 Nov 27 08:06 pilot_heartbeat.json
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas      1064 Nov 27 08:06 memory_monitor_summary.json
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas   1516240 Nov 27 08:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas   1985100 Nov 27 08:06 log.47556161._003613.job.log.tgz.1
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas      8660 Nov 27 08:06 heartbeat.json
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 08:07 boinc_mmap_file
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas        29 Nov 27 08:07 wrapper_checkpoint.txt
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas      4746 Nov 27 08:07 pilotlog.txt
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas   6215805 Nov 27 08:07 log.47556161._003613.job.log.1
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas       353 Nov 27 08:07 output.list
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas       620 Nov 27 08:07 runtime_log
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas   8222720 Nov 27 08:07 result.tar.gz
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 08:07 runtime_log.err
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas       667 Nov 27 08:07 LEbLDm0VKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAkMKDmRuUNhn.diag
[2025-11-27 08:07:42] -rw-r--r-- 1 boincer umatlas     21415 Nov 27 08:07 stderr.txt
[2025-11-27 08:07:42] HITS file was successfully produced:
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas 925035178 Nov 27 08:06 shared/HITS.pool.root.1
[2025-11-27 08:07:42]  *** Contents of shared directory: ***
[2025-11-27 08:07:42] total 1313120
[2025-11-27 08:07:42] -rw-r--r-- 2 boincer umatlas 410752273 Nov 26 19:34 ATLAS.root_0
[2025-11-27 08:07:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:34 start_atlas.sh
[2025-11-27 08:07:42] -rw-r--r-- 2 boincer umatlas    590105 Nov 26 19:34 input.tar.gz
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas 925035178 Nov 27 08:06 HITS.pool.root.1
[2025-11-27 08:07:42] -rw------- 1 boincer umatlas   8222720 Nov 27 08:07 result.tar.gz
08:07:43 (21440): run_atlas exited; CPU time 347140.679569
08:07:43 (21440): called boinc_finish(0)

</stderr_txt>
]]>

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