Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:25:20 (1644498): wrapper (7.7.26015): starting
01:25:20 (1644498): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 01:25:20] Arguments: --nthreads 3
[2025-11-27 01:25:20] Threads: 3
[2025-11-27 01:25:20] Checking for CVMFS
[2025-11-27 01:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:25:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:25:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:25:20] 2.9.2.0 1414835 48 56672 153341 3 88 35789410 36864000 0 130560 0 688676 100.000 1368 27918 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 01:25:20] CVMFS is ok
[2025-11-27 01:25:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:25:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:25:20] Further information can be found at the LHC@home message board.
[2025-11-27 01:25:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:25:20] Checking for apptainer binary...
[2025-11-27 01:25:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:25:20] Running /usr/bin/apptainer --version
[2025-11-27 01:25:20] apptainer version 1.4.1-1.1
[2025-11-27 01:25:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:25:20] thA335
[2025-11-27 01:25:20] apptainer works
[2025-11-27 01:25:20] Set ATHENA_PROC_NUMBER=3
[2025-11-27 01:25:20] Set ATHENA_CORE_NUMBER=3
[2025-11-27 01:25:20] Starting ATLAS job with PandaID=6898377134
[2025-11-27 01:25:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:29:40]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:29:40] 2025-11-27 00:28:47,230 | INFO     | sufficient remaining disk space (827045445632 B)
[2025-11-27 01:29:40] 2025-11-27 00:28:47,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:29:40] 2025-11-27 00:28:47,230 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:29:40] 2025-11-27 00:28:47,230 | INFO     | update_server=False
[2025-11-27 01:29:40] 2025-11-27 00:28:47,230 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | INFO     | aborting loop
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:29:40] 2025-11-27 00:28:47,231 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:29:40] 2025-11-27 00:28:47,732 | INFO     | all payload control threads have been joined
[2025-11-27 01:29:40] 2025-11-27 00:28:47,819 | INFO     | all data control threads have been joined
[2025-11-27 01:29:40] 2025-11-27 00:28:48,115 | INFO     | all job control threads have been joined
[2025-11-27 01:29:40] 2025-11-27 00:28:48,236 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,237 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,237 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,272 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,432 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:29:40] 2025-11-27 00:28:48,616 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,728 | INFO     | [job] validate thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,738 | INFO     | [payload] control thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,790 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,808 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,825 | INFO     | [data] control thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:48,866 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:49,121 | INFO     | [job] control thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:49,513 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:50,521 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:28:51,238 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:29:40] 2025-11-27 00:29:33,598 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:29:40] 2025-11-27 00:29:34,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272643766080)>', '<ExcThread(monitor, started 140271979308800)>']
[2025-11-27 01:29:40] 2025-11-27 00:29:35,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:29:40] 2025-11-27 00:29:35,486 | INFO     | [monitor] control thread has ended
[2025-11-27 01:29:40] 2025-11-27 00:29:39,618 | INFO     | all workflow threads have been joined
[2025-11-27 01:29:40] 2025-11-27 00:29:39,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:29:40] 2025-11-27 00:29:39,619 | INFO     | traces error code: 0
[2025-11-27 01:29:40] 2025-11-27 00:29:39,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:29:40] 2025-11-27 00:29:39,665 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:29:40] 2025-11-27 00:29:39,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:29:40] 2025-11-27 00:29:39,672 [wrapper] pilotpid: 1648230
[2025-11-27 01:29:40] 2025-11-27 00:29:39,675 [wrapper] Pilot exit status: 0
[2025-11-27 01:29:40] 2025-11-27 00:29:39,682 [wrapper] pandaids: 6898377134
[2025-11-27 01:29:40] 2025-11-27 00:29:39,699 [wrapper] cleanup supervisor_pilot 1648236 1648231
[2025-11-27 01:29:40] 2025-11-27 00:29:39,701 [wrapper] Test setup, not cleaning
[2025-11-27 01:29:40] 2025-11-27 00:29:39,704 [wrapper] apfmon messages muted
[2025-11-27 01:29:40] 2025-11-27 00:29:39,707 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:29:40] 2025-11-27 00:29:39,709 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:29:40]  *** Error codes and diagnostics ***
[2025-11-27 01:29:40]     "exeErrorCode": 65,
[2025-11-27 01:29:40]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 01:29:40]     "pilotErrorCode": 1305,
[2025-11-27 01:29:40]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 01:29:40]  *** Listing of results directory ***
[2025-11-27 01:29:40] total 404052
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc    576529 Nov 26 17:12 pilot3.tar.gz
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc      5112 Nov 26 17:18 queuedata.json
[2025-11-27 01:29:40] -rwx------ 1 boinc boinc     36292 Nov 26 17:20 runpilot2-wrapper.sh
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc       100 Nov 27 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:29:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 01:25 run_atlas
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc       105 Nov 27 01:25 job.xml
[2025-11-27 01:29:40] -rw-r--r-- 2 boinc boinc 409560181 Nov 27 01:25 EVNT.47483658._002572.pool.root.1
[2025-11-27 01:29:40] -rw-r--r-- 2 boinc boinc    590105 Nov 27 01:25 input.tar.gz
[2025-11-27 01:29:40] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:25 start_atlas.sh
[2025-11-27 01:29:40] drwxrwx--x 2 boinc boinc      4096 Nov 27 01:25 shared
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:25 boinc_setup_complete
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc      6196 Nov 27 01:25 init_data.xml
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:25 boinc_lockfile
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc      2786 Nov 27 01:25 pandaJob.out
[2025-11-27 01:29:40] -rw------- 1 boinc boinc    991546 Nov 27 01:25 agis_schedconf.cvmfs.json
[2025-11-27 01:29:40] -rw------- 1 boinc boinc   1516240 Nov 27 01:25 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:29:40] drwx------ 5 boinc boinc      4096 Nov 27 01:25 pilot3
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc       523 Nov 27 01:26 boinc_task_state.xml
[2025-11-27 01:29:40] -rw------- 1 boinc boinc       966 Nov 27 01:26 memory_monitor_summary.json
[2025-11-27 01:29:40] -rw------- 1 boinc boinc     55715 Nov 27 01:26 log.47556161._005549.job.log.tgz.1
[2025-11-27 01:29:40] -rw------- 1 boinc boinc        95 Nov 27 01:28 pilot_heartbeat.json
[2025-11-27 01:29:40] -rw------- 1 boinc boinc      8412 Nov 27 01:28 heartbeat.json
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc      8192 Nov 27 01:29 boinc_mmap_file
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc        23 Nov 27 01:29 wrapper_checkpoint.txt
[2025-11-27 01:29:40] -rw------- 1 boinc boinc      4556 Nov 27 01:29 pilotlog.txt
[2025-11-27 01:29:40] -rw------- 1 boinc boinc     93115 Nov 27 01:29 log.47556161._005549.job.log.1
[2025-11-27 01:29:40] -rw------- 1 boinc boinc       186 Nov 27 01:29 output.list
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc       620 Nov 27 01:29 runtime_log
[2025-11-27 01:29:40] -rw------- 1 boinc boinc    163840 Nov 27 01:29 result.tar.gz
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc      8744 Nov 27 01:29 runtime_log.err
[2025-11-27 01:29:40] -rw------- 1 boinc boinc       649 Nov 27 01:29 IFZKDmtQXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDml8MKDmHMC4An.diag
[2025-11-27 01:29:40] -rw-r--r-- 1 boinc boinc      8047 Nov 27 01:29 stderr.txt
[2025-11-27 01:29:40] No HITS result produced
[2025-11-27 01:29:40]  *** Contents of shared directory: ***
[2025-11-27 01:29:40] total 400724
[2025-11-27 01:29:40] -rw-r--r-- 2 boinc boinc 409560181 Nov 27 01:25 ATLAS.root_0
[2025-11-27 01:29:40] -rw-r--r-- 2 boinc boinc    590105 Nov 27 01:25 input.tar.gz
[2025-11-27 01:29:40] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:25 start_atlas.sh
[2025-11-27 01:29:40] -rw------- 1 boinc boinc    163840 Nov 27 01:29 result.tar.gz
01:29:41 (1644498): run_atlas exited; CPU time 31.701816
01:29:41 (1644498): called boinc_finish(0)

</stderr_txt>
]]>

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