Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:16:42 (9120): wrapper (7.7.26015): starting
19:16:42 (9120): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 19:16:42] Arguments: --nthreads 12
[2025-11-26 19:16:42] Threads: 12
[2025-11-26 19:16:42] Checking for CVMFS
[2025-11-26 19:16:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:16:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:16:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:16:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:16:43] 2.11.2.0 2925 288390 94008 153341 1 9 20105793 20275200 1 130560 1 128614426 99.975 15809538 13723 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 19:16:43] CVMFS is ok
[2025-11-26 19:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:16:43] Further information can be found at the LHC@home message board.
[2025-11-26 19:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:16:43] Checking for apptainer binary...
[2025-11-26 19:16:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:16:43] Running /usr/bin/apptainer --version
[2025-11-26 19:16:43] apptainer version 1.3.2-1.el7
[2025-11-26 19:16:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:16:44] c-205-10.aglt2.org
[2025-11-26 19:16:44] apptainer works
[2025-11-26 19:16:44] Set ATHENA_PROC_NUMBER=12
[2025-11-26 19:16:44] Set ATHENA_CORE_NUMBER=12
[2025-11-26 19:16:44] Starting ATLAS job with PandaID=6896990116
[2025-11-26 19:16:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:32:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:32:59] 2025-11-27 09:32:23,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:32:59] 2025-11-27 09:32:25,906 | INFO     | time since job start (33324s) is within the limit (172800.0s)
[2025-11-27 04:32:59] 2025-11-27 09:32:26,415 | INFO     | monitor loop #2505: job 0:6896990116 is in state 'finished'
[2025-11-27 04:32:59] 2025-11-27 09:32:26,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,483 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 04:32:59] 2025-11-27 09:32:27,486 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-27 04:32:59] 2025-11-27 09:32:27,488 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896990116/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,488 | INFO     | extracted standard info from prmon json
[2025-11-27 04:32:59] 2025-11-27 09:32:27,488 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:32:59] 2025-11-27 09:32:27,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:32:59] 2025-11-27 09:32:27,497 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:32:59] 2025-11-27 09:32:27,497 | INFO     | sum of square deviations: 50472485987.85529
[2025-11-27 04:32:59] 2025-11-27 09:32:27,503 | INFO     | sum of deviations: 592786960533.7223
[2025-11-27 04:32:59] 2025-11-27 09:32:27,504 | INFO     | mean x: 1764219273.569597
[2025-11-27 04:32:59] 2025-11-27 09:32:27,504 | INFO     | mean y: 3439827.0073260074
[2025-11-27 04:32:59] 2025-11-27 09:32:27,504 | INFO     | intersect: -20716882551.129055
[2025-11-27 04:32:59] 2025-11-27 09:32:27,504 | INFO     | chi2: 6.167546881049175
[2025-11-27 04:32:59] 2025-11-27 09:32:27,505 | INFO     | sum of square deviations: 49098546235.33082
[2025-11-27 04:32:59] 2025-11-27 09:32:27,511 | INFO     | sum of deviations: 805767160535.3517
[2025-11-27 04:32:59] 2025-11-27 09:32:27,511 | INFO     | mean x: 1764219121.0702403
[2025-11-27 04:32:59] 2025-11-27 09:32:27,511 | INFO     | mean y: 3463453.990757856
[2025-11-27 04:32:59] 2025-11-27 09:32:27,511 | INFO     | intersect: -28949528859.33375
[2025-11-27 04:32:59] 2025-11-27 09:32:27,512 | INFO     | chi2: 3.045825037643451
[2025-11-27 04:32:59] 2025-11-27 09:32:27,512 | INFO     | current chi2=3.045825037643451 (change=50.615291681004315 %)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,513 | INFO     | sum of square deviations: 47749769745.30608
[2025-11-27 04:32:59] 2025-11-27 09:32:27,519 | INFO     | sum of deviations: 861238171703.8177
[2025-11-27 04:32:59] 2025-11-27 09:32:27,519 | INFO     | mean x: 1764218968.5708954
[2025-11-27 04:32:59] 2025-11-27 09:32:27,519 | INFO     | mean y: 3469704.3600746267
[2025-11-27 04:32:59] 2025-11-27 09:32:27,519 | INFO     | intersect: -31816845389.96674
[2025-11-27 04:32:59] 2025-11-27 09:32:27,519 | INFO     | chi2: 2.656058151058514
[2025-11-27 04:32:59] 2025-11-27 09:32:27,520 | INFO     | current chi2=2.656058151058514 (change=12.796758900061404 %)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,520 | INFO     | right removable region: 535
[2025-11-27 04:32:59] 2025-11-27 09:32:27,520 | INFO     | sum of square deviations: 49098523055.3308
[2025-11-27 04:32:59] 2025-11-27 09:32:27,526 | INFO     | sum of deviations: 403857560306.11304
[2025-11-27 04:32:59] 2025-11-27 09:32:27,526 | INFO     | mean x: 1764219426.0702403
[2025-11-27 04:32:59] 2025-11-27 09:32:27,527 | INFO     | mean y: 3460752.2865064694
[2025-11-27 04:32:59] 2025-11-27 09:32:27,527 | INFO     | intersect: -14508042016.4311
[2025-11-27 04:32:59] 2025-11-27 09:32:27,527 | INFO     | chi2: 3.700438884054768
[2025-11-27 04:32:59] 2025-11-27 09:32:27,527 | INFO     | current chi2=3.700438884054768 (change=40.00144700277854 %)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,528 | INFO     | sum of square deviations: 47749723385.30607
[2025-11-27 04:32:59] 2025-11-27 09:32:27,534 | INFO     | sum of deviations: 356173104190.1717
[2025-11-27 04:32:59] 2025-11-27 09:32:27,534 | INFO     | mean x: 1764219578.5708954
[2025-11-27 04:32:59] 2025-11-27 09:32:27,534 | INFO     | mean y: 3466140.100746269
[2025-11-27 04:32:59] 2025-11-27 09:32:27,534 | INFO     | intersect: -13156140224.572744
[2025-11-27 04:32:59] 2025-11-27 09:32:27,535 | INFO     | chi2: 3.623091148492375
[2025-11-27 04:32:59] 2025-11-27 09:32:27,535 | INFO     | current chi2=3.623091148492375 (change=2.090231401893584 %)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,535 | INFO     | left removable region: 20
[2025-11-27 04:32:59] 2025-11-27 09:32:27,536 | INFO     | sum of square deviations: 42354350123.19605
[2025-11-27 04:32:59] 2025-11-27 09:32:27,541 | INFO     | sum of deviations: 562689099578.1398
[2025-11-27 04:32:59] 2025-11-27 09:32:27,541 | INFO     | mean x: 1764219548.0737865
[2025-11-27 04:32:59] 2025-11-27 09:32:27,541 | INFO     | mean y: 3503906.9436893202
[2025-11-27 04:32:59] 2025-11-27 09:32:27,541 | INFO     | intersect: -23434634231.790718
[2025-11-27 04:32:59] 2025-11-27 09:32:27,542 | INFO     | chi2: 0.04875567459694398
[2025-11-27 04:32:59] 2025-11-27 09:32:27,542 | INFO     | current memory leak: 13.29 B/s (using 515 data points, chi2=0.05)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,542 | INFO     | could have reported an average CPU frequency of 2437 MHz (22 samples)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | ..............................
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . Timing measurements:
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . get job = 0 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . initial setup = 2 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . payload setup = 8 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . stage-in = 0 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . payload execution = 33283 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . stage-out = 3 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,543 | INFO     | . log creation = 0 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,544 | INFO     | ..............................
[2025-11-27 04:32:59] 2025-11-27 09:32:27,625 | INFO     | 
[2025-11-27 04:32:59] 2025-11-27 09:32:27,625 | INFO     | job summary report
[2025-11-27 04:32:59] 2025-11-27 09:32:27,625 | INFO     | --------------------------------------------------
[2025-11-27 04:32:59] 2025-11-27 09:32:27,625 | INFO     | PanDA job id: 6896990116
[2025-11-27 04:32:59] 2025-11-27 09:32:27,625 | INFO     | task id: 47556173
[2025-11-27 04:32:59] 2025-11-27 09:32:27,625 | INFO     | errors: (none)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,626 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:32:59] 2025-11-27 09:32:27,626 | INFO     | pilot state: finished 
[2025-11-27 04:32:59] 2025-11-27 09:32:27,626 | INFO     | transexitcode: 0
[2025-11-27 04:32:59] 2025-11-27 09:32:27,626 | INFO     | exeerrorcode: 0
[2025-11-27 04:32:59] 2025-11-27 09:32:27,626 | INFO     | exeerrordiag: 
[2025-11-27 04:32:59] 2025-11-27 09:32:27,626 | INFO     | exitcode: 0
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | exitmsg: OK
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | cpuconsumptiontime: 323462 s
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | nevents: 1000
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | neventsw: 0
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | pid: 19261
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | pgrp: 19261
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | corecount: 12
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | event service: False
[2025-11-27 04:32:59] 2025-11-27 09:32:27,627 | INFO     | sizes: {0: 2284035, 1: 2284290, 6: 2284552, 12: 2284580, 33295: 2325431, 33300: 2334425, 33303: 2334609, 33311: 2334855}
[2025-11-27 04:32:59] 2025-11-27 09:32:27,628 | INFO     | --------------------------------------------------
[2025-11-27 04:32:59] 2025-11-27 09:32:27,628 | INFO     | 
[2025-11-27 04:32:59] 2025-11-27 09:32:27,628 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 04:32:59] 2025-11-27 09:32:27,777 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,777 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,778 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,779 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,780 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,780 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:32:59] 2025-11-27 09:32:27,781 | INFO     | job 6896990116 has completed (purged errors)
[2025-11-27 04:32:59] 2025-11-27 09:32:27,781 | INFO     | overall cleanup function is called
[2025-11-27 04:32:59] 2025-11-27 09:32:28,797 | INFO     | --- collectZombieJob: --- 10, [19261]
[2025-11-27 04:32:59] 2025-11-27 09:32:28,798 | INFO     | zombie collector waiting for pid 19261
[2025-11-27 04:32:59] 2025-11-27 09:32:28,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:32:59] 2025-11-27 09:32:28,798 | INFO     | collected zombie processes
[2025-11-27 04:32:59] 2025-11-27 09:32:28,798 | INFO     | will attempt to kill all subprocesses of pid=19261
[2025-11-27 04:32:59] 2025-11-27 09:32:28,892 | INFO     | process IDs to be killed: [19261] (in reverse order)
[2025-11-27 04:32:59] 2025-11-27 09:32:28,946 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:32:59] 2025-11-27 09:32:28,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:32:59] 2025-11-27 09:32:28,953 | INFO     | did not find any defunct processes belonging to 19261
[2025-11-27 04:32:59] 2025-11-27 09:32:28,956 | INFO     | did not find any defunct processes belonging to 19261
[2025-11-27 04:32:59] 2025-11-27 09:32:28,958 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:32:59] 2025-11-27 09:32:28,959 | INFO     | ready for new job
[2025-11-27 04:32:59] 2025-11-27 09:32:28,959 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:32:59] 2025-11-27 09:32:28,961 | INFO     | ***************************************
[2025-11-27 04:32:59] 2025-11-27 09:32:28,961 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:32:59] 2025-11-27 09:32:28,961 | INFO     | ***************************************
[2025-11-27 04:32:59] 2025-11-27 09:32:28,962 | INFO     | 
[2025-11-27 04:32:59] 2025-11-27 09:32:28,962 | INFO     | architecture information:
[2025-11-27 04:32:59] 2025-11-27 09:32:28,963 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:32:59] 2025-11-27 09:32:28,979 | INFO     | cat /etc/os-release:
[2025-11-27 04:32:59] NAME="CentOS Linux"
[2025-11-27 04:32:59] VERSION="7 (Core)"
[2025-11-27 04:32:59] ID="centos"
[2025-11-27 04:32:59] ID_LIKE="rhel fedora"
[2025-11-27 04:32:59] VERSION_ID="7"
[2025-11-27 04:32:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:32:59] ANSI_COLOR="0;31"
[2025-11-27 04:32:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:32:59] HOME_URL="https://www.centos.org/"
[2025-11-27 04:32:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:32:59] 
[2025-11-27 04:32:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:32:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:32:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:32:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:32:59] 
[2025-11-27 04:32:59] 2025-11-27 09:32:28,979 | INFO     | ***************************************
[2025-11-27 04:32:59] 2025-11-27 09:32:29,482 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 04:32:59] 2025-11-27 09:32:29,499 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-27 04:32:59] 2025-11-27 09:32:29,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:32:59] 2025-11-27 09:32:29,499 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:32:59] 2025-11-27 09:32:29,499 | INFO     | update_server=False
[2025-11-27 04:32:59] 2025-11-27 09:32:29,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:32:59] 2025-11-27 09:32:29,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:32:59] 2025-11-27 09:32:29,536 | INFO     | all data control threads have been joined
[2025-11-27 04:32:59] 2025-11-27 09:32:29,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:32:59] 2025-11-27 09:32:29,924 | INFO     | aborting loop
[2025-11-27 04:32:59] 2025-11-27 09:32:30,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:32:59] 2025-11-27 09:32:30,392 | INFO     | all payload control threads have been joined
[2025-11-27 04:32:59] 2025-11-27 09:32:30,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:32:59] 2025-11-27 09:32:30,505 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:30,506 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:30,542 | INFO     | [data] control thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:30,643 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:30,900 | INFO     | all job control threads have been joined
[2025-11-27 04:32:59] 2025-11-27 09:32:30,929 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:30,952 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:30,978 | INFO     | [job] validate thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:31,398 | INFO     | [payload] control thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:31,423 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:31,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:31,701 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:31,872 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:31,885 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:31,906 | INFO     | [job] control thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:32,262 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:34,457 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:32:59] 2025-11-27 09:32:51,018 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:32:59] 2025-11-27 09:32:51,618 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286646036288)>', '<ExcThread(monitor, started 140285837305600)>']
[2025-11-27 04:32:59] 2025-11-27 09:32:56,643 | INFO     | all workflow threads have been joined
[2025-11-27 04:32:59] 2025-11-27 09:32:56,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:32:59] 2025-11-27 09:32:56,644 | INFO     | traces error code: 0
[2025-11-27 04:32:59] 2025-11-27 09:32:56,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:32:59] 2025-11-27 09:32:59,108 | INFO     | PID=12816 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 04:32:59] 2025-11-27 09:32:59,108 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:32:59] 2025-11-27 09:32:59,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:32:59] 2025-11-27 09:32:59,108 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:32:59] 2025-11-27 09:32:59,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:32:59] 2025-11-27 09:32:59,109 | INFO     | [monitor] control thread has ended
[2025-11-27 04:32:59] 2025-11-27 09:32:59,209 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:32:59] 2025-11-27 09:32:59,213 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:32:59] 2025-11-27 09:32:59,217 [wrapper] pilotpid: 12816
[2025-11-27 04:32:59] 2025-11-27 09:32:59,221 [wrapper] Pilot exit status: 0
[2025-11-27 04:32:59] 2025-11-27 09:32:59,236 [wrapper] pandaids: 6896990116
[2025-11-27 04:32:59] 2025-11-27 09:32:59,276 [wrapper] cleanup supervisor_pilot 23669 12817
[2025-11-27 04:32:59] 2025-11-27 09:32:59,280 [wrapper] Test setup, not cleaning
[2025-11-27 04:32:59] 2025-11-27 09:32:59,284 [wrapper] apfmon messages muted
[2025-11-27 04:32:59] 2025-11-27 09:32:59,288 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:32:59] 2025-11-27 09:32:59,292 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:32:59]  *** Error codes and diagnostics ***
[2025-11-27 04:32:59]     "exeErrorCode": 0,
[2025-11-27 04:32:59]     "exeErrorDiag": "",
[2025-11-27 04:32:59]     "pilotErrorCode": 0,
[2025-11-27 04:32:59]     "pilotErrorDiag": "",
[2025-11-27 04:32:59]  *** Listing of results directory ***
[2025-11-27 04:32:59] total 1314528
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 07:49 pilot3.tar.gz
[2025-11-27 04:32:59] -rwx------ 1 boincer umatlas     36292 Nov 25 08:21 runpilot2-wrapper.sh
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 08:21 queuedata.json
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas       100 Nov 26 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:32:59] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 19:16 run_atlas
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas       105 Nov 26 19:16 job.xml
[2025-11-27 04:32:59] -rw-r--r-- 2 boincer umatlas 409931102 Nov 26 19:16 EVNT.47483658._003082.pool.root.1
[2025-11-27 04:32:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:16 start_atlas.sh
[2025-11-27 04:32:59] drwxrwx--x 2 boincer umatlas      4096 Nov 26 19:16 shared
[2025-11-27 04:32:59] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 19:16 input.tar.gz
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas         0 Nov 26 19:16 boinc_lockfile
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas      2784 Nov 26 19:16 pandaJob.out
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas        57 Nov 26 19:16 setup.sh.local
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas    991546 Nov 26 19:16 agis_schedconf.cvmfs.json
[2025-11-27 04:32:59] drwx------ 5 boincer umatlas      4096 Nov 26 19:17 pilot3
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas       533 Nov 27 04:21 boinc_task_state.xml
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas 918325237 Nov 27 04:31 HITS.47556173._000648.pool.root.1
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 04:31 init_data.xml
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas      1062 Nov 27 04:32 memory_monitor_summary.json
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas   1516240 Nov 27 04:32 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas        95 Nov 27 04:32 pilot_heartbeat.json
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas   2286102 Nov 27 04:32 log.47556173._000648.job.log.tgz.1
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas      8676 Nov 27 04:32 heartbeat.json
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 04:32 boinc_mmap_file
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas        29 Nov 27 04:32 wrapper_checkpoint.txt
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas       745 Nov 27 04:32 pilotlog.txt
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas   4664191 Nov 27 04:32 log.47556173._000648.job.log.1
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas       353 Nov 27 04:32 output.list
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas       620 Nov 27 04:32 runtime_log
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas   6973440 Nov 27 04:32 result.tar.gz
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas       670 Nov 27 04:32 xgRMDmt97h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiOMKDmqvL8En.diag
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 04:32 runtime_log.err
[2025-11-27 04:32:59] -rw-r--r-- 1 boincer umatlas     21343 Nov 27 04:32 stderr.txt
[2025-11-27 04:32:59] HITS file was successfully produced:
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas 918325237 Nov 27 04:31 shared/HITS.pool.root.1
[2025-11-27 04:32:59]  *** Contents of shared directory: ***
[2025-11-27 04:32:59] total 1304540
[2025-11-27 04:32:59] -rw-r--r-- 2 boincer umatlas 409931102 Nov 26 19:16 ATLAS.root_0
[2025-11-27 04:32:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:16 start_atlas.sh
[2025-11-27 04:32:59] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 19:16 input.tar.gz
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas 918325237 Nov 27 04:31 HITS.pool.root.1
[2025-11-27 04:32:59] -rw------- 1 boincer umatlas   6973440 Nov 27 04:32 result.tar.gz
04:33:00 (9120): run_atlas exited; CPU time 312027.991258
04:33:00 (9120): called boinc_finish(0)

</stderr_txt>
]]>

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