Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:58 (1623669): wrapper (7.7.26015): starting
01:20:58 (1623669): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 01:20:58] Arguments: --nthreads 3
[2025-11-27 01:20:58] Threads: 3
[2025-11-27 01:20:58] Checking for CVMFS
[2025-11-27 01:20:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:20:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:20:59] 2.9.2.0 1414835 44 56200 153341 3 88 35789392 36864000 0 130560 0 626070 100.000 1367 28479 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 01:20:59] CVMFS is ok
[2025-11-27 01:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:20:59] Further information can be found at the LHC@home message board.
[2025-11-27 01:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:20:59] Checking for apptainer binary...
[2025-11-27 01:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:20:59] Running /usr/bin/apptainer --version
[2025-11-27 01:20:59] apptainer version 1.4.1-1.1
[2025-11-27 01:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:20:59] thA335
[2025-11-27 01:20:59] apptainer works
[2025-11-27 01:20:59] Set ATHENA_PROC_NUMBER=3
[2025-11-27 01:20:59] Set ATHENA_CORE_NUMBER=3
[2025-11-27 01:20:59] Starting ATLAS job with PandaID=6897139684
[2025-11-27 01:20:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:25:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:25:15] 2025-11-27 00:24:24,094 | INFO     | sufficient remaining disk space (826229653504 B)
[2025-11-27 01:25:15] 2025-11-27 00:24:24,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:25:15] 2025-11-27 00:24:24,094 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:25:15] 2025-11-27 00:24:24,094 | INFO     | update_server=False
[2025-11-27 01:25:15] 2025-11-27 00:24:24,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:25:15] 2025-11-27 00:24:24,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:25:15] 2025-11-27 00:24:24,095 | INFO     | aborting loop
[2025-11-27 01:25:15] 2025-11-27 00:24:24,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:25:15] 2025-11-27 00:24:24,224 | INFO     | all job control threads have been joined
[2025-11-27 01:25:15] 2025-11-27 00:24:24,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:25:15] 2025-11-27 00:24:25,046 | INFO     | all data control threads have been joined
[2025-11-27 01:25:15] 2025-11-27 00:24:25,100 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:25,101 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:25,102 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:25,126 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:25,230 | INFO     | [job] control thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:25,369 | INFO     | all payload control threads have been joined
[2025-11-27 01:25:15] 2025-11-27 00:24:25,969 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,052 | INFO     | [data] control thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,228 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,256 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,347 | INFO     | [job] validate thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,369 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,374 | INFO     | [payload] control thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,415 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,483 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:26,852 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:27,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:25:15] 2025-11-27 00:24:31,035 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:25:15] 2025-11-27 00:24:54,515 | INFO     | PID=1627394 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 01:25:15] 2025-11-27 00:24:54,515 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:25:15] 2025-11-27 00:24:54,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:25:15] 2025-11-27 00:24:54,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:25:15] 2025-11-27 00:25:09,639 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:25:15] 2025-11-27 00:25:10,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520746952512)>', '<ExcThread(monitor, started 140519980132096)>']
[2025-11-27 01:25:15] 2025-11-27 00:25:11,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:25:15] 2025-11-27 00:25:11,605 | INFO     | [monitor] control thread has ended
[2025-11-27 01:25:15] 2025-11-27 00:25:15,832 | INFO     | all workflow threads have been joined
[2025-11-27 01:25:15] 2025-11-27 00:25:15,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:25:15] 2025-11-27 00:25:15,833 | INFO     | traces error code: 0
[2025-11-27 01:25:15] 2025-11-27 00:25:15,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:25:15] 2025-11-27 00:25:15,880 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:25:15] 2025-11-27 00:25:15,883 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:25:15] 2025-11-27 00:25:15,886 [wrapper] pilotpid: 1627394
[2025-11-27 01:25:15] 2025-11-27 00:25:15,889 [wrapper] Pilot exit status: 0
[2025-11-27 01:25:15] 2025-11-27 00:25:15,896 [wrapper] pandaids: 6897139684
[2025-11-27 01:25:15] 2025-11-27 00:25:15,913 [wrapper] cleanup supervisor_pilot 1627400 1627395
[2025-11-27 01:25:15] 2025-11-27 00:25:15,916 [wrapper] Test setup, not cleaning
[2025-11-27 01:25:15] 2025-11-27 00:25:15,919 [wrapper] apfmon messages muted
[2025-11-27 01:25:15] 2025-11-27 00:25:15,921 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:25:15] 2025-11-27 00:25:15,924 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:25:15]  *** Error codes and diagnostics ***
[2025-11-27 01:25:15]     "exeErrorCode": 65,
[2025-11-27 01:25:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 01:25:15]     "pilotErrorCode": 1305,
[2025-11-27 01:25:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 01:25:15]  *** Listing of results directory ***
[2025-11-27 01:25:15] total 401916
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:55 queuedata.json
[2025-11-27 01:25:15] -rwx------ 1 boinc boinc     36292 Nov 25 17:56 runpilot2-wrapper.sh
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc       100 Nov 27 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:25:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 01:20 run_atlas
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc       105 Nov 27 01:20 job.xml
[2025-11-27 01:25:15] -rw-r--r-- 2 boinc boinc 407379188 Nov 27 01:20 EVNT.47483658._002195.pool.root.1
[2025-11-27 01:25:15] drwxrwx--x 2 boinc boinc      4096 Nov 27 01:20 shared
[2025-11-27 01:25:15] -rw-r--r-- 2 boinc boinc    590107 Nov 27 01:20 input.tar.gz
[2025-11-27 01:25:15] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:20 start_atlas.sh
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:20 boinc_setup_complete
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc      6196 Nov 27 01:20 init_data.xml
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc         0 Nov 27 01:20 boinc_lockfile
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc      2786 Nov 27 01:20 pandaJob.out
[2025-11-27 01:25:15] -rw------- 1 boinc boinc    991546 Nov 27 01:21 agis_schedconf.cvmfs.json
[2025-11-27 01:25:15] -rw------- 1 boinc boinc   1516240 Nov 27 01:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:25:15] drwx------ 5 boinc boinc      4096 Nov 27 01:21 pilot3
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc       523 Nov 27 01:22 boinc_task_state.xml
[2025-11-27 01:25:15] -rw------- 1 boinc boinc       958 Nov 27 01:22 memory_monitor_summary.json
[2025-11-27 01:25:15] -rw------- 1 boinc boinc     55641 Nov 27 01:22 log.47556161._001782.job.log.tgz.1
[2025-11-27 01:25:15] -rw------- 1 boinc boinc        95 Nov 27 01:24 pilot_heartbeat.json
[2025-11-27 01:25:15] -rw------- 1 boinc boinc      8404 Nov 27 01:24 heartbeat.json
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc      8192 Nov 27 01:25 boinc_mmap_file
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc        22 Nov 27 01:25 wrapper_checkpoint.txt
[2025-11-27 01:25:15] -rw------- 1 boinc boinc      4752 Nov 27 01:25 pilotlog.txt
[2025-11-27 01:25:15] -rw------- 1 boinc boinc     93561 Nov 27 01:25 log.47556161._001782.job.log.1
[2025-11-27 01:25:15] -rw------- 1 boinc boinc       186 Nov 27 01:25 output.list
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc       620 Nov 27 01:25 runtime_log
[2025-11-27 01:25:15] -rw------- 1 boinc boinc    163840 Nov 27 01:25 result.tar.gz
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc      8744 Nov 27 01:25 runtime_log.err
[2025-11-27 01:25:15] -rw------- 1 boinc boinc       649 Nov 27 01:25 kHINDmbWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzXJKDmC0F9vn.diag
[2025-11-27 01:25:15] -rw-r--r-- 1 boinc boinc      8125 Nov 27 01:25 stderr.txt
[2025-11-27 01:25:15] No HITS result produced
[2025-11-27 01:25:15]  *** Contents of shared directory: ***
[2025-11-27 01:25:15] total 398592
[2025-11-27 01:25:15] -rw-r--r-- 2 boinc boinc 407379188 Nov 27 01:20 ATLAS.root_0
[2025-11-27 01:25:15] -rw-r--r-- 2 boinc boinc    590107 Nov 27 01:20 input.tar.gz
[2025-11-27 01:25:15] -rw-r--r-- 2 boinc boinc     15847 Nov 27 01:20 start_atlas.sh
[2025-11-27 01:25:15] -rw------- 1 boinc boinc    163840 Nov 27 01:25 result.tar.gz
01:25:17 (1623669): run_atlas exited; CPU time 31.551998
01:25:17 (1623669): called boinc_finish(0)

</stderr_txt>
]]>

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