Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:37:10 (3261309): wrapper (7.7.26015): starting
21:37:10 (3261309): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:37:10] Arguments: --nthreads 8
[2025-11-26 21:37:10] Threads: 8
[2025-11-26 21:37:10] Checking for CVMFS
[2025-11-26 21:37:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:37:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:37:12] 2.13.3.0 9239 30852 346296 153343 1 373 22667819 32935937 25662 16776704 0 115634504 99.512 139388171 37823 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 21:37:12] CVMFS is ok
[2025-11-26 21:37:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:37:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:37:13] Further information can be found at the LHC@home message board.
[2025-11-26 21:37:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:37:13] Checking for apptainer binary...
[2025-11-26 21:37:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:37:13] Running /usr/bin/apptainer --version
[2025-11-26 21:37:13] apptainer version 1.4.4-1.el9
[2025-11-26 21:37:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:37:13] c6-6-39-3.aglt2.org
[2025-11-26 21:37:13] apptainer works
[2025-11-26 21:37:13] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:37:13] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:37:13] Starting ATLAS job with PandaID=6898377083
[2025-11-26 21:37:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:57:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:57:28] 2025-11-27 20:56:24,241 | INFO     | time since job start (65879s) is within the limit (172800.0s)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,335 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 15:57:28] 2025-11-27 20:56:24,344 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2892.7603392857154
[2025-11-27 15:57:28] 2025-11-27 20:56:24,355 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898377083/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,356 | INFO     | extracted standard info from prmon json
[2025-11-27 15:57:28] 2025-11-27 20:56:24,356 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:57:28] 2025-11-27 20:56:24,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:57:28] 2025-11-27 20:56:24,377 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:57:28] 2025-11-27 20:56:24,379 | INFO     | sum of square deviations: 387363370122.8823
[2025-11-27 15:57:28] 2025-11-27 20:56:24,401 | INFO     | sum of deviations: 2946577495304.274
[2025-11-27 15:57:28] 2025-11-27 20:56:24,401 | INFO     | mean x: 1764244083.7864437
[2025-11-27 15:57:28] 2025-11-27 20:56:24,401 | INFO     | mean y: 2888458.9229340763
[2025-11-27 15:57:28] 2025-11-27 20:56:24,401 | INFO     | intersect: -13417280598.000908
[2025-11-27 15:57:28] 2025-11-27 20:56:24,403 | INFO     | chi2: 13.329735196277449
[2025-11-27 15:57:28] 2025-11-27 20:56:24,404 | INFO     | sum of square deviations: 381993846936.8504
[2025-11-27 15:57:28] 2025-11-27 20:56:24,431 | INFO     | sum of deviations: 3295440973940.1357
[2025-11-27 15:57:28] 2025-11-27 20:56:24,432 | INFO     | mean x: 1764243931.2947762
[2025-11-27 15:57:28] 2025-11-27 20:56:24,432 | INFO     | mean y: 2898367.7369402987
[2025-11-27 15:57:28] 2025-11-27 20:56:24,432 | INFO     | intersect: -15217141917.820776
[2025-11-27 15:57:28] 2025-11-27 20:56:24,433 | INFO     | chi2: 10.431303365941602
[2025-11-27 15:57:28] 2025-11-27 20:56:24,433 | INFO     | current chi2=10.431303365941602 (change=21.744106598196204 %)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,433 | INFO     | right removable region: 1071
[2025-11-27 15:57:28] 2025-11-27 20:56:24,434 | INFO     | sum of square deviations: 381992673296.8508
[2025-11-27 15:57:28] 2025-11-27 20:56:24,455 | INFO     | sum of deviations: 2503702589455.752
[2025-11-27 15:57:28] 2025-11-27 20:56:24,456 | INFO     | mean x: 1764244236.2947762
[2025-11-27 15:57:28] 2025-11-27 20:56:24,456 | INFO     | mean y: 2901033.1875
[2025-11-27 15:57:28] 2025-11-27 20:56:24,456 | INFO     | intersect: -11560521963.177158
[2025-11-27 15:57:28] 2025-11-27 20:56:24,457 | INFO     | chi2: 8.902435639055204
[2025-11-27 15:57:28] 2025-11-27 20:56:24,457 | INFO     | current chi2=8.902435639055204 (change=33.21370974015029 %)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,458 | INFO     | sum of square deviations: 376671837870.66956
[2025-11-27 15:57:28] 2025-11-27 20:56:24,529 | INFO     | sum of deviations: 2130243649732.5693
[2025-11-27 15:57:28] 2025-11-27 20:56:24,534 | INFO     | mean x: 1764244388.8031864
[2025-11-27 15:57:28] 2025-11-27 20:56:24,534 | INFO     | mean y: 2911737.4789128397
[2025-11-27 15:57:28] 2025-11-27 20:56:24,535 | INFO     | intersect: -9974660323.840706
[2025-11-27 15:57:28] 2025-11-27 20:56:24,536 | INFO     | chi2: 5.898695968906055
[2025-11-27 15:57:28] 2025-11-27 20:56:24,536 | INFO     | current chi2=5.898695968906055 (change=33.74065022129078 %)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,537 | INFO     | sum of square deviations: 371400696127.45746
[2025-11-27 15:57:28] 2025-11-27 20:56:24,599 | INFO     | sum of deviations: 1908314461835.3186
[2025-11-27 15:57:28] 2025-11-27 20:56:24,599 | INFO     | mean x: 1764244541.3107345
[2025-11-27 15:57:28] 2025-11-27 20:56:24,599 | INFO     | mean y: 2918153.5687382296
[2025-11-27 15:57:28] 2025-11-27 20:56:24,599 | INFO     | intersect: -9062044318.235287
[2025-11-27 15:57:28] 2025-11-27 20:56:24,601 | INFO     | chi2: 4.855244278802437
[2025-11-27 15:57:28] 2025-11-27 20:56:24,601 | INFO     | current chi2=4.855244278802437 (change=17.68953164570595 %)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,601 | INFO     | left removable region: 30
[2025-11-27 15:57:28] 2025-11-27 20:56:24,602 | INFO     | sum of square deviations: 349801153849.52936
[2025-11-27 15:57:28] 2025-11-27 20:56:24,662 | INFO     | sum of deviations: 2142112872484.7378
[2025-11-27 15:57:28] 2025-11-27 20:56:24,662 | INFO     | mean x: 1764244815.8261287
[2025-11-27 15:57:28] 2025-11-27 20:56:24,662 | INFO     | mean y: 2936658.097982709
[2025-11-27 15:57:28] 2025-11-27 20:56:24,662 | INFO     | intersect: -10800948602.444305
[2025-11-27 15:57:28] 2025-11-27 20:56:24,668 | INFO     | chi2: 1.0067139063348318
[2025-11-27 15:57:28] 2025-11-27 20:56:24,669 | INFO     | current memory leak: 6.12 B/s (using 1041 data points, chi2=1.01)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,670 | INFO     | could have reported an average CPU frequency of 2906 MHz (39 samples)
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | ..............................
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . Timing measurements:
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . get job = 0 s
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . initial setup = 5 s
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . payload setup = 43 s
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . stage-in = 0 s
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . payload execution = 65721 s
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . stage-out = 5 s
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | . log creation = 1 s
[2025-11-27 15:57:28] 2025-11-27 20:56:24,671 | INFO     | ..............................
[2025-11-27 15:57:28] 2025-11-27 20:56:25,145 | INFO     | 
[2025-11-27 15:57:28] 2025-11-27 20:56:25,145 | INFO     | job summary report
[2025-11-27 15:57:28] 2025-11-27 20:56:25,146 | INFO     | --------------------------------------------------
[2025-11-27 15:57:28] 2025-11-27 20:56:25,146 | INFO     | PanDA job id: 6898377083
[2025-11-27 15:57:28] 2025-11-27 20:56:25,146 | INFO     | task id: 47556161
[2025-11-27 15:57:28] 2025-11-27 20:56:25,146 | INFO     | errors: (none)
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | pilot state: finished 
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | transexitcode: 0
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | exeerrorcode: 0
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | exeerrordiag: 
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | exitcode: 0
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | exitmsg: OK
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | cpuconsumptiontime: 255038 s
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | nevents: 1000
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | neventsw: 0
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | pid: 3278701
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | pgrp: 3278701
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | corecount: 8
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | event service: False
[2025-11-27 15:57:28] 2025-11-27 20:56:25,147 | INFO     | sizes: {0: 2284088, 1: 2284172, 2: 2284371, 13: 2284371, 25: 2284427, 36: 2284455, 37: 2284873, 47: 2284901, 65770: 2340627, 65777: 2349621, 65779: 2349677, 65799:
[2025-11-27 15:57:28] 2025-11-27 20:56:25,148 | INFO     | --------------------------------------------------
[2025-11-27 15:57:28] 2025-11-27 20:56:25,148 | INFO     | 
[2025-11-27 15:57:28] 2025-11-27 20:56:25,148 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 15:57:28] 2025-11-27 20:56:25,351 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,351 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,353 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:57:28] 2025-11-27 20:56:25,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,353 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:57:28] 2025-11-27 20:56:25,353 | INFO     | job 6898377083 has completed (purged errors)
[2025-11-27 15:57:28] 2025-11-27 20:56:25,353 | INFO     | overall cleanup function is called
[2025-11-27 15:57:28] 2025-11-27 20:56:26,058 | INFO     | PID=3265737 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:57:28] 2025-11-27 20:56:26,058 | INFO     | .. there are 31 such processes running
[2025-11-27 15:57:28] 2025-11-27 20:56:26,389 | INFO     | --- collectZombieJob: --- 10, [3278701]
[2025-11-27 15:57:28] 2025-11-27 20:56:26,389 | INFO     | zombie collector waiting for pid 3278701
[2025-11-27 15:57:28] 2025-11-27 20:56:26,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:57:28] 2025-11-27 20:56:26,390 | INFO     | collected zombie processes
[2025-11-27 15:57:28] 2025-11-27 20:56:26,390 | INFO     | will attempt to kill all subprocesses of pid=3278701
[2025-11-27 15:57:28] 2025-11-27 20:56:27,203 | INFO     | process IDs to be killed: [3278701] (in reverse order)
[2025-11-27 15:57:28] 2025-11-27 20:56:27,401 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:57:28] 2025-11-27 20:56:27,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:57:28] 2025-11-27 20:56:27,437 | INFO     | did not find any defunct processes belonging to 3278701
[2025-11-27 15:57:28] 2025-11-27 20:56:27,474 | INFO     | did not find any defunct processes belonging to 3278701
[2025-11-27 15:57:28] 2025-11-27 20:56:27,475 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:57:28] 2025-11-27 20:56:27,475 | INFO     | ready for new job
[2025-11-27 15:57:28] 2025-11-27 20:56:27,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:57:28] 2025-11-27 20:56:27,485 | INFO     | ***************************************
[2025-11-27 15:57:28] 2025-11-27 20:56:27,485 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:57:28] 2025-11-27 20:56:27,485 | INFO     | ***************************************
[2025-11-27 15:57:28] 2025-11-27 20:56:27,485 | INFO     | 
[2025-11-27 15:57:28] 2025-11-27 20:56:27,492 | INFO     | architecture information:
[2025-11-27 15:57:28] 2025-11-27 20:56:27,500 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:57:28] 2025-11-27 20:56:27,536 | INFO     | cat /etc/os-release:
[2025-11-27 15:57:28] NAME="CentOS Linux"
[2025-11-27 15:57:28] VERSION="7 (Core)"
[2025-11-27 15:57:28] ID="centos"
[2025-11-27 15:57:28] ID_LIKE="rhel fedora"
[2025-11-27 15:57:28] VERSION_ID="7"
[2025-11-27 15:57:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:57:28] ANSI_COLOR="0;31"
[2025-11-27 15:57:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:57:28] HOME_URL="https://www.centos.org/"
[2025-11-27 15:57:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:57:28] 
[2025-11-27 15:57:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:57:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:57:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:57:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:57:28] 
[2025-11-27 15:57:28] 2025-11-27 20:56:27,536 | INFO     | ***************************************
[2025-11-27 15:57:28] 2025-11-27 20:56:28,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 15:57:28] 2025-11-27 20:56:28,099 | INFO     | sufficient remaining disk space (71300022272 B)
[2025-11-27 15:57:28] 2025-11-27 20:56:28,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:57:28] 2025-11-27 20:56:28,099 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:57:28] 2025-11-27 20:56:28,099 | INFO     | update_server=False
[2025-11-27 15:57:28] 2025-11-27 20:56:28,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:57:28] 2025-11-27 20:56:28,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:57:28] 2025-11-27 20:56:28,101 | INFO     | aborting loop
[2025-11-27 15:57:28] 2025-11-27 20:56:28,168 | INFO     | all payload control threads have been joined
[2025-11-27 15:57:28] 2025-11-27 20:56:28,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:57:28] 2025-11-27 20:56:28,595 | INFO     | all data control threads have been joined
[2025-11-27 15:57:28] 2025-11-27 20:56:28,729 | INFO     | all job control threads have been joined
[2025-11-27 15:57:28] 2025-11-27 20:56:28,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:57:28] 2025-11-27 20:56:29,106 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,107 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,174 | INFO     | [payload] control thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,199 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,366 | INFO     | [job] validate thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,434 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,601 | INFO     | [data] control thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,667 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,748 | INFO     | [job] control thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:29,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:57:28] 2025-11-27 20:56:30,042 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:30,043 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:30,261 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:30,339 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:30,954 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:33,004 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:57:28] 2025-11-27 20:56:58,918 | INFO     | PID=3265737 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:57:28] 2025-11-27 20:56:58,918 | INFO     | .. there are 31 such processes running
[2025-11-27 15:57:28] 2025-11-27 20:56:58,919 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:57:28] 2025-11-27 20:56:58,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:57:28] 2025-11-27 20:56:58,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:57:28] 2025-11-27 20:57:21,284 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:57:28] 2025-11-27 20:57:22,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663715354432)>', '<ExcThread(monitor, started 140662846510848)>']
[2025-11-27 15:57:28] 2025-11-27 20:57:23,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:57:28] 2025-11-27 20:57:23,066 | INFO     | [monitor] control thread has ended
[2025-11-27 15:57:28] 2025-11-27 20:57:27,748 | INFO     | all workflow threads have been joined
[2025-11-27 15:57:28] 2025-11-27 20:57:27,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:57:28] 2025-11-27 20:57:27,749 | INFO     | traces error code: 0
[2025-11-27 15:57:28] 2025-11-27 20:57:27,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:57:28] 2025-11-27 20:57:27,969 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:57:28] 2025-11-27 20:57:27,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:57:28] 2025-11-27 20:57:28,009 [wrapper] pilotpid: 3265737
[2025-11-27 15:57:28] 2025-11-27 20:57:28,033 [wrapper] Pilot exit status: 0
[2025-11-27 15:57:28] 2025-11-27 20:57:28,116 [wrapper] pandaids: 6898377083
[2025-11-27 15:57:28] 2025-11-27 20:57:28,307 [wrapper] cleanup supervisor_pilot 2348825 3265738
[2025-11-27 15:57:28] 2025-11-27 20:57:28,314 [wrapper] Test setup, not cleaning
[2025-11-27 15:57:28] 2025-11-27 20:57:28,325 [wrapper] apfmon messages muted
[2025-11-27 15:57:28] 2025-11-27 20:57:28,350 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:57:28] 2025-11-27 20:57:28,368 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:57:28]  *** Error codes and diagnostics ***
[2025-11-27 15:57:28]     "exeErrorCode": 0,
[2025-11-27 15:57:28]     "exeErrorDiag": "",
[2025-11-27 15:57:28]     "pilotErrorCode": 0,
[2025-11-27 15:57:28]     "pilotErrorDiag": "",
[2025-11-27 15:57:28]  *** Listing of results directory ***
[2025-11-27 15:57:28] total 1320416
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:14 queuedata.json
[2025-11-27 15:57:28] -rwx------. 1 boincer umatlas     36292 Nov 26 11:15 runpilot2-wrapper.sh
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas       100 Nov 26 21:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:57:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 21:37 run_atlas
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas       105 Nov 26 21:37 job.xml
[2025-11-27 15:57:28] -rw-r--r--. 2 boincer umatlas 409967235 Nov 26 21:37 EVNT.47483658._002568.pool.root.1
[2025-11-27 15:57:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:37 start_atlas.sh
[2025-11-27 15:57:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 21:37 shared
[2025-11-27 15:57:28] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 21:37 input.tar.gz
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas         0 Nov 26 21:37 boinc_lockfile
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 21:37 pandaJob.out
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas        57 Nov 26 21:37 setup.sh.local
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas    991554 Nov 26 21:38 agis_schedconf.cvmfs.json
[2025-11-27 15:57:28] drwx------. 5 boincer umatlas      4096 Nov 26 21:38 pilot3
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:41 boinc_task_state.xml
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas 916896865 Nov 27 15:55 HITS.47556161._005505.pool.root.1
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 15:55 init_data.xml
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas      1058 Nov 27 15:55 memory_monitor_summary.json
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas   2213927 Nov 27 15:56 log.47556161._005505.job.log.tgz.1
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas        95 Nov 27 15:56 pilot_heartbeat.json
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas      8622 Nov 27 15:56 heartbeat.json
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:57 wrapper_checkpoint.txt
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:57 boinc_mmap_file
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas      4824 Nov 27 15:57 pilotlog.txt
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas   8446336 Nov 27 15:57 log.47556161._005505.job.log.1
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas       353 Nov 27 15:57 output.list
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:57 runtime_log
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas  10680320 Nov 27 15:57 result.tar.gz
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 15:57 runtime_log.err
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas       661 Nov 27 15:57 EfoKDmzLXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK8MKDmaXa7Wo.diag
[2025-11-27 15:57:28] -rw-r--r--. 1 boincer umatlas     21451 Nov 27 15:57 stderr.txt
[2025-11-27 15:57:28] HITS file was successfully produced:
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas 916896865 Nov 27 15:55 shared/HITS.pool.root.1
[2025-11-27 15:57:28]  *** Contents of shared directory: ***
[2025-11-27 15:57:28] total 1306800
[2025-11-27 15:57:28] -rw-r--r--. 2 boincer umatlas 409967235 Nov 26 21:37 ATLAS.root_0
[2025-11-27 15:57:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:37 start_atlas.sh
[2025-11-27 15:57:28] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 21:37 input.tar.gz
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas 916896865 Nov 27 15:55 HITS.pool.root.1
[2025-11-27 15:57:28] -rw-------. 1 boincer umatlas  10680320 Nov 27 15:57 result.tar.gz
15:57:30 (3261309): run_atlas exited; CPU time 256928.888188
15:57:30 (3261309): called boinc_finish(0)

</stderr_txt>
]]>

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