Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:11:16 (2729891): wrapper (7.7.26015): starting
19:11:16 (2729891): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 19:11:16] Arguments: --nthreads 9
[2025-11-26 19:11:16] Threads: 9
[2025-11-26 19:11:16] Checking for CVMFS
[2025-11-26 19:11:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:11:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:11:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:11:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:11:18] 2.13.3.0 9239 30706 352464 153340 3 614 21280524 32935936 24129 16776704 0 115076586 99.511 139045184 37829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:11:18] CVMFS is ok
[2025-11-26 19:11:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:11:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:11:18] Further information can be found at the LHC@home message board.
[2025-11-26 19:11:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:11:18] Checking for apptainer binary...
[2025-11-26 19:11:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:11:18] Running /usr/bin/apptainer --version
[2025-11-26 19:11:18] apptainer version 1.4.4-1.el9
[2025-11-26 19:11:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:11:18] c6-6-39-3.aglt2.org
[2025-11-26 19:11:18] apptainer works
[2025-11-26 19:11:19] Set ATHENA_PROC_NUMBER=9
[2025-11-26 19:11:19] Set ATHENA_CORE_NUMBER=9
[2025-11-26 19:11:19] Starting ATLAS job with PandaID=6898039424
[2025-11-26 19:11:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:38:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:38:49] 2025-11-27 15:37:52,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:38:49] 2025-11-27 15:37:53,598 | INFO     | time since job start (55549s) is within the limit (172800.0s)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,662 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 10:38:49] 2025-11-27 15:37:54,683 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2938.7273571428564
[2025-11-27 10:38:49] 2025-11-27 15:37:54,692 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6898039424/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,694 | INFO     | extracted standard info from prmon json
[2025-11-27 10:38:49] 2025-11-27 15:37:54,694 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:38:49] 2025-11-27 15:37:54,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:38:49] 2025-11-27 15:37:54,711 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:38:49] 2025-11-27 15:37:54,712 | INFO     | sum of square deviations: 232900751292.45053
[2025-11-27 10:38:49] 2025-11-27 15:37:54,728 | INFO     | sum of deviations: 2265563712549.291
[2025-11-27 10:38:49] 2025-11-27 15:37:54,730 | INFO     | mean x: 1764230108.6512651
[2025-11-27 10:38:49] 2025-11-27 15:37:54,730 | INFO     | mean y: 3061612.1397139714
[2025-11-27 10:38:49] 2025-11-27 15:37:54,731 | INFO     | intersect: -17158650802.124884
[2025-11-27 10:38:49] 2025-11-27 15:37:54,732 | INFO     | chi2: 11.321076945389745
[2025-11-27 10:38:49] 2025-11-27 15:37:54,733 | INFO     | sum of square deviations: 229079072303.74213
[2025-11-27 10:38:49] 2025-11-27 15:37:54,753 | INFO     | sum of deviations: 2542602076105.998
[2025-11-27 10:38:49] 2025-11-27 15:37:54,753 | INFO     | mean x: 1764229956.1603982
[2025-11-27 10:38:49] 2025-11-27 15:37:54,753 | INFO     | mean y: 3072662.3517699116
[2025-11-27 10:38:49] 2025-11-27 15:37:54,753 | INFO     | intersect: -19578527281.068928
[2025-11-27 10:38:49] 2025-11-27 15:37:54,754 | INFO     | chi2: 8.972431782103621
[2025-11-27 10:38:49] 2025-11-27 15:37:54,754 | INFO     | current chi2=8.972431782103621 (change=20.74577511146196 %)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,754 | INFO     | right removable region: 903
[2025-11-27 10:38:49] 2025-11-27 15:37:54,755 | INFO     | sum of square deviations: 229078156693.74213
[2025-11-27 10:38:49] 2025-11-27 15:37:54,773 | INFO     | sum of deviations: 1890586491967.1926
[2025-11-27 10:38:49] 2025-11-27 15:37:54,774 | INFO     | mean x: 1764230261.1603982
[2025-11-27 10:38:49] 2025-11-27 15:37:54,774 | INFO     | mean y: 3076568.357300885
[2025-11-27 10:38:49] 2025-11-27 15:37:54,774 | INFO     | intersect: -14557150162.158894
[2025-11-27 10:38:49] 2025-11-27 15:37:54,775 | INFO     | chi2: 7.327317032052369
[2025-11-27 10:38:49] 2025-11-27 15:37:54,775 | INFO     | current chi2=7.327317032052369 (change=35.277208454658066 %)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,776 | INFO     | sum of square deviations: 225297609394.88144
[2025-11-27 10:38:49] 2025-11-27 15:37:54,793 | INFO     | sum of deviations: 1537001779742.3083
[2025-11-27 10:38:49] 2025-11-27 15:37:54,793 | INFO     | mean x: 1764230413.669633
[2025-11-27 10:38:49] 2025-11-27 15:37:54,793 | INFO     | mean y: 3090827.6340378197
[2025-11-27 10:38:49] 2025-11-27 15:37:54,793 | INFO     | intersect: -12032657323.306355
[2025-11-27 10:38:49] 2025-11-27 15:37:54,801 | INFO     | chi2: 3.882198265823754
[2025-11-27 10:38:49] 2025-11-27 15:37:54,802 | INFO     | current chi2=3.882198265823754 (change=47.01746561747503 %)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,803 | INFO     | sum of square deviations: 221559040991.42752
[2025-11-27 10:38:49] 2025-11-27 15:37:54,831 | INFO     | sum of deviations: 1387416694010.507
[2025-11-27 10:38:49] 2025-11-27 15:37:54,832 | INFO     | mean x: 1764230566.1756153
[2025-11-27 10:38:49] 2025-11-27 15:37:54,832 | INFO     | mean y: 3096921.124161074
[2025-11-27 10:38:49] 2025-11-27 15:37:54,832 | INFO     | intersect: -11044626198.829062
[2025-11-27 10:38:49] 2025-11-27 15:37:54,835 | INFO     | chi2: 3.237981610526864
[2025-11-27 10:38:49] 2025-11-27 15:37:54,836 | INFO     | current chi2=3.237981610526864 (change=16.594120423166874 %)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,836 | INFO     | left removable region: 30
[2025-11-27 10:38:49] 2025-11-27 15:37:54,837 | INFO     | sum of square deviations: 206309645629.76862
[2025-11-27 10:38:49] 2025-11-27 15:37:54,851 | INFO     | sum of deviations: 1511727329374.5042
[2025-11-27 10:38:49] 2025-11-27 15:37:54,851 | INFO     | mean x: 1764230840.69874
[2025-11-27 10:38:49] 2025-11-27 15:37:54,851 | INFO     | mean y: 3117842.184421535
[2025-11-27 10:38:49] 2025-11-27 15:37:54,851 | INFO     | intersect: -12924227212.713068
[2025-11-27 10:38:49] 2025-11-27 15:37:54,852 | INFO     | chi2: 0.47188311513356773
[2025-11-27 10:38:49] 2025-11-27 15:37:54,852 | INFO     | current memory leak: 7.33 B/s (using 873 data points, chi2=0.47)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,853 | INFO     | could have reported an average CPU frequency of 2915 MHz (34 samples)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | ..............................
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . Timing measurements:
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . get job = 0 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . initial setup = 3 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . payload setup = 26 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . stage-in = 0 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . payload execution = 55461 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . stage-out = 4 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | . log creation = 0 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,854 | INFO     | ..............................
[2025-11-27 10:38:49] 2025-11-27 15:37:54,942 | INFO     | 
[2025-11-27 10:38:49] 2025-11-27 15:37:54,942 | INFO     | job summary report
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | --------------------------------------------------
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | PanDA job id: 6898039424
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | task id: 47556161
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | errors: (none)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | pilot state: finished 
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | transexitcode: 0
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | exeerrorcode: 0
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | exeerrordiag: 
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | exitcode: 0
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | exitmsg: OK
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | cpuconsumptiontime: 249923 s
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | nevents: 1000
[2025-11-27 10:38:49] 2025-11-27 15:37:54,943 | INFO     | neventsw: 0
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | pid: 2743258
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | pgrp: 2743258
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | corecount: 9
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | event service: False
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | sizes: {0: 2283436, 1: 2284121, 2: 2284320, 13: 2284320, 19: 2284638, 24: 2284666, 55488: 2335849, 55489: 2335848, 55493: 2344898, 55494: 2344954, 55506: 2345200}
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | --------------------------------------------------
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | 
[2025-11-27 10:38:49] 2025-11-27 15:37:54,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 10:38:49] 2025-11-27 15:37:54,966 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,967 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,969 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:38:49] 2025-11-27 15:37:54,969 | INFO     | job 6898039424 has completed (purged errors)
[2025-11-27 10:38:49] 2025-11-27 15:37:54,969 | INFO     | overall cleanup function is called
[2025-11-27 10:38:49] 2025-11-27 15:37:55,986 | INFO     | --- collectZombieJob: --- 10, [2743258]
[2025-11-27 10:38:49] 2025-11-27 15:37:55,986 | INFO     | zombie collector waiting for pid 2743258
[2025-11-27 10:38:49] 2025-11-27 15:37:55,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:38:49] 2025-11-27 15:37:55,986 | INFO     | collected zombie processes
[2025-11-27 10:38:49] 2025-11-27 15:37:55,987 | INFO     | will attempt to kill all subprocesses of pid=2743258
[2025-11-27 10:38:49] 2025-11-27 15:37:56,445 | INFO     | process IDs to be killed: [2743258] (in reverse order)
[2025-11-27 10:38:49] 2025-11-27 15:37:56,581 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:38:49] 2025-11-27 15:37:56,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:38:49] 2025-11-27 15:37:56,598 | INFO     | did not find any defunct processes belonging to 2743258
[2025-11-27 10:38:49] 2025-11-27 15:37:56,615 | INFO     | did not find any defunct processes belonging to 2743258
[2025-11-27 10:38:49] 2025-11-27 15:37:56,618 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:38:49] 2025-11-27 15:37:56,618 | INFO     | ready for new job
[2025-11-27 10:38:49] 2025-11-27 15:37:56,619 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:38:49] 2025-11-27 15:37:56,627 | INFO     | ***************************************
[2025-11-27 10:38:49] 2025-11-27 15:37:56,628 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:38:49] 2025-11-27 15:37:56,628 | INFO     | ***************************************
[2025-11-27 10:38:49] 2025-11-27 15:37:56,628 | INFO     | 
[2025-11-27 10:38:49] 2025-11-27 15:37:56,631 | INFO     | architecture information:
[2025-11-27 10:38:49] 2025-11-27 15:37:56,633 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:38:49] 2025-11-27 15:37:56,660 | INFO     | cat /etc/os-release:
[2025-11-27 10:38:49] NAME="CentOS Linux"
[2025-11-27 10:38:49] VERSION="7 (Core)"
[2025-11-27 10:38:49] ID="centos"
[2025-11-27 10:38:49] ID_LIKE="rhel fedora"
[2025-11-27 10:38:49] VERSION_ID="7"
[2025-11-27 10:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:38:49] ANSI_COLOR="0;31"
[2025-11-27 10:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:38:49] HOME_URL="https://www.centos.org/"
[2025-11-27 10:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:38:49] 
[2025-11-27 10:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:38:49] 
[2025-11-27 10:38:49] 2025-11-27 15:37:56,661 | INFO     | ***************************************
[2025-11-27 10:38:49] 2025-11-27 15:37:57,165 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 10:38:49] 2025-11-27 15:37:57,197 | INFO     | sufficient remaining disk space (69645369344 B)
[2025-11-27 10:38:49] 2025-11-27 15:37:57,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:38:49] 2025-11-27 15:37:57,198 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:38:49] 2025-11-27 15:37:57,198 | INFO     | update_server=False
[2025-11-27 10:38:49] 2025-11-27 15:37:57,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:38:49] 2025-11-27 15:37:57,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:38:49] 2025-11-27 15:37:57,199 | INFO     | aborting loop
[2025-11-27 10:38:49] 2025-11-27 15:37:57,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:38:49] 2025-11-27 15:37:58,066 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:38:49] 2025-11-27 15:37:58,169 | INFO     | all data control threads have been joined
[2025-11-27 10:38:49] 2025-11-27 15:37:58,204 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:58,209 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:58,217 | INFO     | all payload control threads have been joined
[2025-11-27 10:38:49] 2025-11-27 15:37:58,383 | INFO     | all job control threads have been joined
[2025-11-27 10:38:49] 2025-11-27 15:37:58,794 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,035 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,090 | INFO     | [job] validate thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,134 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,148 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,174 | INFO     | [data] control thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,223 | INFO     | [payload] control thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,389 | INFO     | [job] control thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,494 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,651 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:37:59,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:38:49] 2025-11-27 15:38:00,073 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:38:00,972 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:38:01,702 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:38:07,622 | INFO     | job.realtimelogging is not enabled
[2025-11-27 10:38:49] 2025-11-27 15:38:08,627 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:38:49] 2025-11-27 15:38:27,162 | INFO     | PID=2736188 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:38:49] 2025-11-27 15:38:27,162 | INFO     | .. there are 32 such processes running
[2025-11-27 10:38:49] 2025-11-27 15:38:27,162 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:38:49] 2025-11-27 15:38:27,162 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:38:49] 2025-11-27 15:38:27,162 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:38:49] 2025-11-27 15:38:42,263 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:38:49] 2025-11-27 15:38:44,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139889168090944)>', '<ExcThread(monitor, started 139888158570240)>']
[2025-11-27 10:38:49] 2025-11-27 15:38:44,265 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:38:49] 2025-11-27 15:38:44,265 | INFO     | [monitor] control thread has ended
[2025-11-27 10:38:49] 2025-11-27 15:38:49,039 | INFO     | all workflow threads have been joined
[2025-11-27 10:38:49] 2025-11-27 15:38:49,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:38:49] 2025-11-27 15:38:49,040 | INFO     | traces error code: 0
[2025-11-27 10:38:49] 2025-11-27 15:38:49,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:38:49] 2025-11-27 15:38:49,228 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:38:49] 2025-11-27 15:38:49,232 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:38:49] 2025-11-27 15:38:49,239 [wrapper] pilotpid: 2736188
[2025-11-27 10:38:49] 2025-11-27 15:38:49,244 [wrapper] Pilot exit status: 0
[2025-11-27 10:38:49] 2025-11-27 15:38:49,269 [wrapper] pandaids: 6898039424
[2025-11-27 10:38:49] 2025-11-27 15:38:49,465 [wrapper] cleanup supervisor_pilot 1248783 2736189
[2025-11-27 10:38:49] 2025-11-27 15:38:49,470 [wrapper] Test setup, not cleaning
[2025-11-27 10:38:49] 2025-11-27 15:38:49,479 [wrapper] apfmon messages muted
[2025-11-27 10:38:49] 2025-11-27 15:38:49,482 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:38:49] 2025-11-27 15:38:49,513 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:38:49]  *** Error codes and diagnostics ***
[2025-11-27 10:38:49]     "exeErrorCode": 0,
[2025-11-27 10:38:49]     "exeErrorDiag": "",
[2025-11-27 10:38:49]     "pilotErrorCode": 0,
[2025-11-27 10:38:49]     "pilotErrorDiag": "",
[2025-11-27 10:38:49]  *** Listing of results directory ***
[2025-11-27 10:38:49] total 1334716
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:51 queuedata.json
[2025-11-27 10:38:49] -rwx------. 1 boincer umatlas     36292 Nov 25 21:55 runpilot2-wrapper.sh
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:38:49] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:11 run_atlas
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:11 job.xml
[2025-11-27 10:38:49] -rw-r--r--. 2 boincer umatlas 410616997 Nov 26 19:11 EVNT.47483658._002398.pool.root.1
[2025-11-27 10:38:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:11 start_atlas.sh
[2025-11-27 10:38:49] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:11 shared
[2025-11-27 10:38:49] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 19:11 input.tar.gz
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:11 boinc_lockfile
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 19:11 pandaJob.out
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas        57 Nov 26 19:11 setup.sh.local
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas    991538 Nov 26 19:12 agis_schedconf.cvmfs.json
[2025-11-27 10:38:49] drwx------. 5 boincer umatlas      4096 Nov 26 19:12 pilot3
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas       533 Nov 27 10:26 boinc_task_state.xml
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas 933493063 Nov 27 10:37 HITS.47556161._003808.pool.root.1
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 10:37 init_data.xml
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas      1069 Nov 27 10:37 memory_monitor_summary.json
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas   1516240 Nov 27 10:37 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas   2204456 Nov 27 10:37 log.47556161._003808.job.log.tgz.1
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas        95 Nov 27 10:37 pilot_heartbeat.json
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas      8634 Nov 27 10:37 heartbeat.json
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:38 wrapper_checkpoint.txt
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:38 boinc_mmap_file
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas      4896 Nov 27 10:38 pilotlog.txt
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas   7150932 Nov 27 10:38 log.47556161._003808.job.log.1
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas       353 Nov 27 10:38 output.list
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:38 runtime_log
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas   9379840 Nov 27 10:38 result.tar.gz
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas       661 Nov 27 10:38 z4hMDmcrKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRlMKDmJaJJNo.diag
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 10:38 runtime_log.err
[2025-11-27 10:38:49] -rw-r--r--. 1 boincer umatlas     21365 Nov 27 10:38 stderr.txt
[2025-11-27 10:38:49] HITS file was successfully produced:
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas 933493063 Nov 27 10:37 shared/HITS.pool.root.1
[2025-11-27 10:38:49]  *** Contents of shared directory: ***
[2025-11-27 10:38:49] total 1322376
[2025-11-27 10:38:49] -rw-r--r--. 2 boincer umatlas 410616997 Nov 26 19:11 ATLAS.root_0
[2025-11-27 10:38:49] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:11 start_atlas.sh
[2025-11-27 10:38:49] -rw-r--r--. 2 boincer umatlas    590108 Nov 26 19:11 input.tar.gz
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas 933493063 Nov 27 10:37 HITS.pool.root.1
[2025-11-27 10:38:49] -rw-------. 1 boincer umatlas   9379840 Nov 27 10:38 result.tar.gz
10:38:51 (2729891): run_atlas exited; CPU time 251460.631214
10:38:51 (2729891): called boinc_finish(0)

</stderr_txt>
]]>

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