Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:05:49 (2207578): wrapper (7.7.26015): starting
19:05:49 (2207578): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:05:49] Arguments: --nthreads 8
[2025-11-26 19:05:49] Threads: 8
[2025-11-26 19:05:49] Checking for CVMFS
[2025-11-26 19:05:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:05:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:05:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:05:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:05:50] 2.13.3.0 10121 30700 439048 153340 1 492 22084552 32935936 61624 16776704 0 347505871 99.785 180910571 27427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:05:50] CVMFS is ok
[2025-11-26 19:05:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:05:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:05:50] Further information can be found at the LHC@home message board.
[2025-11-26 19:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:05:50] Checking for apptainer binary...
[2025-11-26 19:05:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:05:50] Running /usr/bin/apptainer --version
[2025-11-26 19:05:50] apptainer version 1.4.4-1.el9
[2025-11-26 19:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:05:50] lc-10-11.aglt2.org
[2025-11-26 19:05:50] apptainer works
[2025-11-26 19:05:51] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:05:51] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:05:51] Starting ATLAS job with PandaID=6897394512
[2025-11-26 19:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:07:57]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:07:57] 2025-11-27 20:07:04,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:07:57] 2025-11-27 20:07:04,182 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:07:57] 2025-11-27 20:07:04,184 | INFO     | sum of square deviations: 508212734344.7027
[2025-11-27 15:07:57] 2025-11-27 20:07:04,394 | INFO     | time since job start (72028s) is within the limit (172800.0s)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,455 | INFO     | sum of deviations: 2077459008479.0344
[2025-11-27 15:07:57] 2025-11-27 20:07:04,455 | INFO     | mean x: 1764238012.1603053
[2025-11-27 15:07:57] 2025-11-27 20:07:04,455 | INFO     | mean y: 2912398.338422392
[2025-11-27 15:07:57] 2025-11-27 20:07:04,455 | INFO     | intersect: -7208894594.631653
[2025-11-27 15:07:57] 2025-11-27 20:07:04,457 | INFO     | chi2: 10.723262082376188
[2025-11-27 15:07:57] 2025-11-27 20:07:04,480 | INFO     | sum of square deviations: 501775680846.7438
[2025-11-27 15:07:57] 2025-11-27 20:07:04,522 | INFO     | sum of deviations: 2483274055471.3384
[2025-11-27 15:07:57] 2025-11-27 20:07:04,522 | INFO     | mean x: 1764237859.6720614
[2025-11-27 15:07:57] 2025-11-27 20:07:04,523 | INFO     | mean y: 2922011.31516184
[2025-11-27 15:07:57] 2025-11-27 20:07:04,523 | INFO     | intersect: -8728242674.08939
[2025-11-27 15:07:57] 2025-11-27 20:07:04,524 | INFO     | chi2: 7.50257641968781
[2025-11-27 15:07:57] 2025-11-27 20:07:04,524 | INFO     | current chi2=7.50257641968781 (change=30.034570058504993 %)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,526 | INFO     | sum of square deviations: 495393233023.4572
[2025-11-27 15:07:57] 2025-11-27 20:07:04,562 | INFO     | sum of deviations: 2833570054429.387
[2025-11-27 15:07:57] 2025-11-27 20:07:04,563 | INFO     | mean x: 1764237707.1839178
[2025-11-27 15:07:57] 2025-11-27 20:07:04,564 | INFO     | mean y: 2930373.4354148847
[2025-11-27 15:07:57] 2025-11-27 20:07:04,564 | INFO     | intersect: -10088227120.70581
[2025-11-27 15:07:57] 2025-11-27 20:07:04,565 | INFO     | chi2: 4.773895141810874
[2025-11-27 15:07:57] 2025-11-27 20:07:04,566 | INFO     | current chi2=4.773895141810874 (change=36.36992314688718 %)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,567 | INFO     | sum of square deviations: 489064375396.54675
[2025-11-27 15:07:57] 2025-11-27 20:07:04,597 | INFO     | sum of deviations: 2912893546452.0356
[2025-11-27 15:07:57] 2025-11-27 20:07:04,597 | INFO     | mean x: 1764237554.6864262
[2025-11-27 15:07:57] 2025-11-27 20:07:04,597 | INFO     | mean y: 2932281.3754295534
[2025-11-27 15:07:57] 2025-11-27 20:07:04,597 | INFO     | intersect: -10504960842.689354
[2025-11-27 15:07:57] 2025-11-27 20:07:04,598 | INFO     | chi2: 4.500188869783827
[2025-11-27 15:07:57] 2025-11-27 20:07:04,599 | INFO     | current chi2=4.500188869783827 (change=5.733395139534262 %)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,599 | INFO     | right removable region: 1163
[2025-11-27 15:07:57] 2025-11-27 20:07:04,600 | INFO     | sum of square deviations: 501773551572.0519
[2025-11-27 15:07:57] 2025-11-27 20:07:04,631 | INFO     | sum of deviations: 1638300729006.0024
[2025-11-27 15:07:57] 2025-11-27 20:07:04,631 | INFO     | mean x: 1764238164.673765
[2025-11-27 15:07:57] 2025-11-27 20:07:04,631 | INFO     | mean y: 2922797.1592844976
[2025-11-27 15:07:57] 2025-11-27 20:07:04,631 | INFO     | intersect: -5757350262.809286
[2025-11-27 15:07:57] 2025-11-27 20:07:04,633 | INFO     | chi2: 7.232364395302958
[2025-11-27 15:07:57] 2025-11-27 20:07:04,633 | INFO     | current chi2=7.232364395302958 (change=32.55443782177592 %)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,635 | INFO     | sum of square deviations: 495389117468.71875
[2025-11-27 15:07:57] 2025-11-27 20:07:04,665 | INFO     | sum of deviations: 1455868551863.9714
[2025-11-27 15:07:57] 2025-11-27 20:07:04,665 | INFO     | mean x: 1764238317.1856287
[2025-11-27 15:07:57] 2025-11-27 20:07:04,666 | INFO     | mean y: 2927150.7005988024
[2025-11-27 15:07:57] 2025-11-27 20:07:04,666 | INFO     | intersect: -5181884128.780442
[2025-11-27 15:07:57] 2025-11-27 20:07:04,667 | INFO     | chi2: 6.5982110608834335
[2025-11-27 15:07:57] 2025-11-27 20:07:04,668 | INFO     | current chi2=6.5982110608834335 (change=8.768271339195435 %)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,668 | INFO     | left removable region: 20
[2025-11-27 15:07:57] 2025-11-27 20:07:04,669 | INFO     | sum of square deviations: 463067274721.561
[2025-11-27 15:07:57] 2025-11-27 20:07:04,698 | INFO     | sum of deviations: 2122481533697.373
[2025-11-27 15:07:57] 2025-11-27 20:07:04,698 | INFO     | mean x: 1764238134.231846
[2025-11-27 15:07:57] 2025-11-27 20:07:04,698 | INFO     | mean y: 2951388.885389326
[2025-11-27 15:07:57] 2025-11-27 20:07:04,698 | INFO     | intersect: -8083482408.889198
[2025-11-27 15:07:57] 2025-11-27 20:07:04,700 | INFO     | chi2: 0.18733053174800895
[2025-11-27 15:07:57] 2025-11-27 20:07:04,700 | INFO     | current memory leak: 4.58 B/s (using 1143 data points, chi2=0.19)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | could have reported an average CPU frequency of 2712 MHz (43 samples)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | ..............................
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | . Timing measurements:
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | . get job = 0 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | . initial setup = 3 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | . payload setup = 23 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | . stage-in = 0 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,702 | INFO     | . payload execution = 71921 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,703 | INFO     | . stage-out = 9 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,703 | INFO     | . log creation = 1 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,703 | INFO     | ..............................
[2025-11-27 15:07:57] 2025-11-27 20:07:04,817 | INFO     | 
[2025-11-27 15:07:57] 2025-11-27 20:07:04,817 | INFO     | job summary report
[2025-11-27 15:07:57] 2025-11-27 20:07:04,817 | INFO     | --------------------------------------------------
[2025-11-27 15:07:57] 2025-11-27 20:07:04,817 | INFO     | PanDA job id: 6897394512
[2025-11-27 15:07:57] 2025-11-27 20:07:04,817 | INFO     | task id: 47556161
[2025-11-27 15:07:57] 2025-11-27 20:07:04,817 | INFO     | errors: (none)
[2025-11-27 15:07:57] 2025-11-27 20:07:04,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | pilot state: finished 
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | transexitcode: 0
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | exeerrorcode: 0
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | exeerrordiag: 
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | exitcode: 0
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | exitmsg: OK
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | cpuconsumptiontime: 260948 s
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | nevents: 1000
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | neventsw: 0
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | pid: 2231221
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | pgrp: 2231221
[2025-11-27 15:07:57] 2025-11-27 20:07:04,818 | INFO     | corecount: 8
[2025-11-27 15:07:57] 2025-11-27 20:07:04,819 | INFO     | event service: False
[2025-11-27 15:07:57] 2025-11-27 20:07:04,819 | INFO     | sizes: {0: 2284038, 1: 2284293, 2: 2284293, 12: 2284321, 20: 2284611, 23: 2284639, 71949: 2342757, 71959: 2351751, 71961: 2351807, 71989: 2352053}
[2025-11-27 15:07:57] 2025-11-27 20:07:04,819 | INFO     | --------------------------------------------------
[2025-11-27 15:07:57] 2025-11-27 20:07:04,819 | INFO     | 
[2025-11-27 15:07:57] 2025-11-27 20:07:04,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 15:07:57] 2025-11-27 20:07:05,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,017 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,017 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,017 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,017 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:07:57] 2025-11-27 20:07:05,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,019 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:07:57] 2025-11-27 20:07:05,019 | INFO     | job 6897394512 has completed (purged errors)
[2025-11-27 15:07:57] 2025-11-27 20:07:05,019 | INFO     | overall cleanup function is called
[2025-11-27 15:07:57] 2025-11-27 20:07:06,056 | INFO     | --- collectZombieJob: --- 10, [2231221]
[2025-11-27 15:07:57] 2025-11-27 20:07:06,057 | INFO     | zombie collector waiting for pid 2231221
[2025-11-27 15:07:57] 2025-11-27 20:07:06,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:07:57] 2025-11-27 20:07:06,057 | INFO     | collected zombie processes
[2025-11-27 15:07:57] 2025-11-27 20:07:06,057 | INFO     | will attempt to kill all subprocesses of pid=2231221
[2025-11-27 15:07:57] 2025-11-27 20:07:07,337 | INFO     | process IDs to be killed: [2231221] (in reverse order)
[2025-11-27 15:07:57] 2025-11-27 20:07:08,004 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:07:57] 2025-11-27 20:07:08,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:07:57] 2025-11-27 20:07:08,039 | INFO     | did not find any defunct processes belonging to 2231221
[2025-11-27 15:07:57] 2025-11-27 20:07:08,072 | INFO     | did not find any defunct processes belonging to 2231221
[2025-11-27 15:07:57] 2025-11-27 20:07:08,074 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:07:57] 2025-11-27 20:07:08,074 | INFO     | ready for new job
[2025-11-27 15:07:57] 2025-11-27 20:07:08,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:07:57] 2025-11-27 20:07:08,079 | INFO     | ***************************************
[2025-11-27 15:07:57] 2025-11-27 20:07:08,080 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:07:57] 2025-11-27 20:07:08,080 | INFO     | ***************************************
[2025-11-27 15:07:57] 2025-11-27 20:07:08,080 | INFO     | 
[2025-11-27 15:07:57] 2025-11-27 20:07:08,086 | INFO     | architecture information:
[2025-11-27 15:07:57] 2025-11-27 20:07:08,087 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:07:57] 2025-11-27 20:07:08,156 | INFO     | cat /etc/os-release:
[2025-11-27 15:07:57] NAME="CentOS Linux"
[2025-11-27 15:07:57] VERSION="7 (Core)"
[2025-11-27 15:07:57] ID="centos"
[2025-11-27 15:07:57] ID_LIKE="rhel fedora"
[2025-11-27 15:07:57] VERSION_ID="7"
[2025-11-27 15:07:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:07:57] ANSI_COLOR="0;31"
[2025-11-27 15:07:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:07:57] HOME_URL="https://www.centos.org/"
[2025-11-27 15:07:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:07:57] 
[2025-11-27 15:07:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:07:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:07:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:07:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:07:57] 
[2025-11-27 15:07:57] 2025-11-27 20:07:08,156 | INFO     | ***************************************
[2025-11-27 15:07:57] 2025-11-27 20:07:08,661 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 15:07:57] 2025-11-27 20:07:08,791 | INFO     | sufficient remaining disk space (83665879040 B)
[2025-11-27 15:07:57] 2025-11-27 20:07:08,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:07:57] 2025-11-27 20:07:08,791 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:07:57] 2025-11-27 20:07:08,791 | INFO     | update_server=False
[2025-11-27 15:07:57] 2025-11-27 20:07:08,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:07:57] 2025-11-27 20:07:08,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:07:57] 2025-11-27 20:07:09,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:07:57] 2025-11-27 20:07:09,291 | INFO     | aborting loop
[2025-11-27 15:07:57] 2025-11-27 20:07:09,731 | INFO     | all data control threads have been joined
[2025-11-27 15:07:57] 2025-11-27 20:07:09,797 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:09,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:07:57] 2025-11-27 20:07:09,879 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:09,880 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:09,880 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:09,881 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:09,886 | INFO     | [job] validate thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:09,950 | INFO     | all job control threads have been joined
[2025-11-27 15:07:57] 2025-11-27 20:07:10,055 | INFO     | all payload control threads have been joined
[2025-11-27 15:07:57] 2025-11-27 20:07:10,216 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:10,296 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:10,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:07:57] 2025-11-27 20:07:10,737 | INFO     | [data] control thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:10,813 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:10,871 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:10,954 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:10,955 | INFO     | [job] control thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:10,978 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:11,061 | INFO     | [payload] control thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:14,338 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:07:57] 2025-11-27 20:07:40,223 | INFO     | PID=2217505 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:07:57] 2025-11-27 20:07:40,242 | INFO     | .. there are 98 such processes running
[2025-11-27 15:07:57] 2025-11-27 20:07:40,243 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:07:57] 2025-11-27 20:07:40,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:07:57] 2025-11-27 20:07:40,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:07:57] 2025-11-27 20:07:49,223 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:07:57] 2025-11-27 20:07:51,336 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212648085312)>', '<ExcThread(monitor, started 140211983984384)>']
[2025-11-27 15:07:57] 2025-11-27 20:07:52,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:07:57] 2025-11-27 20:07:52,325 | INFO     | [monitor] control thread has ended
[2025-11-27 15:07:57] 2025-11-27 20:07:56,362 | INFO     | all workflow threads have been joined
[2025-11-27 15:07:57] 2025-11-27 20:07:56,363 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:07:57] 2025-11-27 20:07:56,366 | INFO     | traces error code: 0
[2025-11-27 15:07:57] 2025-11-27 20:07:56,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:07:57] 2025-11-27 20:07:56,699 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:07:57] 2025-11-27 20:07:56,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:07:57] 2025-11-27 20:07:56,731 [wrapper] pilotpid: 2217505
[2025-11-27 15:07:57] 2025-11-27 20:07:56,754 [wrapper] Pilot exit status: 0
[2025-11-27 15:07:57] 2025-11-27 20:07:56,853 [wrapper] pandaids: 6897394512
[2025-11-27 15:07:57] 2025-11-27 20:07:57,089 [wrapper] cleanup supervisor_pilot 2931043 2217506
[2025-11-27 15:07:57] 2025-11-27 20:07:57,126 [wrapper] Test setup, not cleaning
[2025-11-27 15:07:57] 2025-11-27 20:07:57,149 [wrapper] apfmon messages muted
[2025-11-27 15:07:57] 2025-11-27 20:07:57,165 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:07:57] 2025-11-27 20:07:57,172 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:07:57]  *** Error codes and diagnostics ***
[2025-11-27 15:07:57]     "exeErrorCode": 0,
[2025-11-27 15:07:57]     "exeErrorDiag": "",
[2025-11-27 15:07:57]     "pilotErrorCode": 0,
[2025-11-27 15:07:57]     "pilotErrorDiag": "",
[2025-11-27 15:07:57]  *** Listing of results directory ***
[2025-11-27 15:07:57] total 1338768
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 15:07:57] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:07:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:05 run_atlas
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:05 job.xml
[2025-11-27 15:07:57] -rw-r--r--. 2 boincer umatlas 410280163 Nov 26 19:05 EVNT.47483658._002221.pool.root.1
[2025-11-27 15:07:57] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:05 start_atlas.sh
[2025-11-27 15:07:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:05 shared
[2025-11-27 15:07:57] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 19:05 input.tar.gz
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:05 boinc_lockfile
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 19:05 pandaJob.out
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas        57 Nov 26 19:05 setup.sh.local
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas    991538 Nov 26 19:06 agis_schedconf.cvmfs.json
[2025-11-27 15:07:57] drwx------. 5 boincer umatlas      4096 Nov 26 19:06 pilot3
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas       533 Nov 27 14:51 boinc_task_state.xml
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas      6888 Nov 27 15:00 init_data.xml
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas 935601953 Nov 27 15:05 HITS.47556161._002050.pool.root.1
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas      1059 Nov 27 15:06 memory_monitor_summary.json
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas   2221397 Nov 27 15:06 log.47556161._002050.job.log.tgz.1
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas      8634 Nov 27 15:07 heartbeat.json
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas        95 Nov 27 15:07 pilot_heartbeat.json
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:07 boinc_mmap_file
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:07 wrapper_checkpoint.txt
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas      4824 Nov 27 15:07 pilotlog.txt
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas   8322868 Nov 27 15:07 log.47556161._002050.job.log.1
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas       353 Nov 27 15:07 output.list
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:07 runtime_log
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas  10567680 Nov 27 15:07 result.tar.gz
[2025-11-27 15:07:57] -rw-------. 1 boincer umatlas       660 Nov 27 15:07 vPwLDmDXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1UMKDma92ESo.diag
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 15:07 runtime_log.err
[2025-11-27 15:07:57] -rw-r--r--. 1 boincer umatlas     21167 Nov 27 15:07 stderr.txt
[2025-11-27 15:07:58] HITS file was successfully produced:
[2025-11-27 15:07:58] -rw-------. 1 boincer umatlas 935601953 Nov 27 15:05 shared/HITS.pool.root.1
[2025-11-27 15:07:58]  *** Contents of shared directory: ***
[2025-11-27 15:07:58] total 1325268
[2025-11-27 15:07:58] -rw-r--r--. 2 boincer umatlas 410280163 Nov 26 19:05 ATLAS.root_0
[2025-11-27 15:07:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:05 start_atlas.sh
[2025-11-27 15:07:58] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 19:05 input.tar.gz
[2025-11-27 15:07:58] -rw-------. 1 boincer umatlas 935601953 Nov 27 15:05 HITS.pool.root.1
[2025-11-27 15:07:58] -rw-------. 1 boincer umatlas  10567680 Nov 27 15:07 result.tar.gz
15:07:59 (2207578): run_atlas exited; CPU time 264964.714732
15:07:59 (2207578): called boinc_finish(0)

</stderr_txt>
]]>

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