Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:03:20 (623827): wrapper (7.7.26015): starting
19:03:20 (623827): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:03:20] Arguments: --nthreads 8
[2025-11-26 19:03:20] Threads: 8
[2025-11-26 19:03:20] Checking for CVMFS
[2025-11-26 19:03:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:03:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:03:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:03:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:03:22] 2.13.2.0 7884 37344 227196 153340 1 626 24120710 40960000 28821 16776704 0 385892379 99.728 275314673 47221 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 19:03:22] CVMFS is ok
[2025-11-26 19:03:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:03:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:03:22] Further information can be found at the LHC@home message board.
[2025-11-26 19:03:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:03:22] Checking for apptainer binary...
[2025-11-26 19:03:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:03:22] Running /usr/bin/apptainer --version
[2025-11-26 19:03:22] apptainer version 1.4.4-1.el9
[2025-11-26 19:03:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:03:23] c-208-38.aglt2.org
[2025-11-26 19:03:23] apptainer works
[2025-11-26 19:03:23] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:03:23] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:03:23] Starting ATLAS job with PandaID=6898377042
[2025-11-26 19:03:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:35:08]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:35:08] 2025-11-27 19:34:22,470 | INFO     | time since job start (70182s) is within the limit (172800.0s)
[2025-11-27 14:35:08] 2025-11-27 19:34:22,878 | INFO     | monitor loop #4303: job 0:6898377042 is in state 'finished'
[2025-11-27 14:35:08] 2025-11-27 19:34:22,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:35:08] 2025-11-27 19:34:24,479 | INFO     | time since job start (70184s) is within the limit (172800.0s)
[2025-11-27 14:35:08] 2025-11-27 19:34:25,383 | INFO     | monitor loop #4304: job 0:6898377042 is in state 'finished'
[2025-11-27 14:35:08] 2025-11-27 19:34:25,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:35:08] 2025-11-27 19:34:26,494 | INFO     | time since job start (70186s) is within the limit (172800.0s)
[2025-11-27 14:35:08] 2025-11-27 19:34:27,888 | INFO     | monitor loop #4305: job 0:6898377042 is in state 'finished'
[2025-11-27 14:35:08] 2025-11-27 19:34:27,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:35:08] 2025-11-27 19:34:28,501 | INFO     | time since job start (70188s) is within the limit (172800.0s)
[2025-11-27 14:35:08] 2025-11-27 19:34:30,393 | INFO     | monitor loop #4306: job 0:6898377042 is in state 'finished'
[2025-11-27 14:35:08] 2025-11-27 19:34:30,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:35:08] 2025-11-27 19:34:30,507 | INFO     | time since job start (70190s) is within the limit (172800.0s)
[2025-11-27 14:35:08] 2025-11-27 19:34:32,519 | INFO     | time since job start (70192s) is within the limit (172800.0s)
[2025-11-27 14:35:08] 2025-11-27 19:34:32,900 | INFO     | monitor loop #4307: job 0:6898377042 is in state 'finished'
[2025-11-27 14:35:08] 2025-11-27 19:34:32,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,060 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 14:35:08] 2025-11-27 19:34:33,069 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3733.1018984375014
[2025-11-27 14:35:08] 2025-11-27 19:34:33,094 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6898377042/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,094 | INFO     | extracted standard info from prmon json
[2025-11-27 14:35:08] 2025-11-27 19:34:33,094 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:35:08] 2025-11-27 19:34:33,094 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:35:08] 2025-11-27 19:34:33,107 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:35:08] 2025-11-27 19:34:33,108 | INFO     | sum of square deviations: 469133469424.9438
[2025-11-27 14:35:08] 2025-11-27 19:34:33,123 | INFO     | sum of deviations: 3819397453913.3745
[2025-11-27 14:35:08] 2025-11-27 19:34:33,124 | INFO     | mean x: 1764237015.0783973
[2025-11-27 14:35:08] 2025-11-27 19:34:33,124 | INFO     | mean y: 2887345.1846689894
[2025-11-27 14:35:08] 2025-11-27 19:34:33,124 | INFO     | intersect: -14360450175.265297
[2025-11-27 14:35:08] 2025-11-27 19:34:33,124 | INFO     | chi2: 43.23042028451364
[2025-11-27 14:35:08] 2025-11-27 19:34:33,125 | INFO     | sum of square deviations: 463031482285.6395
[2025-11-27 14:35:08] 2025-11-27 19:34:33,141 | INFO     | sum of deviations: 4206132045121.1333
[2025-11-27 14:35:08] 2025-11-27 19:34:33,141 | INFO     | mean x: 1764236862.5940506
[2025-11-27 14:35:08] 2025-11-27 19:34:33,142 | INFO     | mean y: 2897007.6964129484
[2025-11-27 14:35:08] 2025-11-27 19:34:33,142 | INFO     | intersect: -16023255612.230848
[2025-11-27 14:35:08] 2025-11-27 19:34:33,142 | INFO     | chi2: 39.56200791903174
[2025-11-27 14:35:08] 2025-11-27 19:34:33,142 | INFO     | current chi2=39.56200791903174 (change=8.485719873503122 %)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,142 | INFO     | right removable region: 1142
[2025-11-27 14:35:08] 2025-11-27 19:34:33,143 | INFO     | sum of square deviations: 463028976405.63965
[2025-11-27 14:35:08] 2025-11-27 19:34:33,158 | INFO     | sum of deviations: 3326619079775.746
[2025-11-27 14:35:08] 2025-11-27 19:34:33,158 | INFO     | mean x: 1764237167.5940506
[2025-11-27 14:35:08] 2025-11-27 19:34:33,158 | INFO     | mean y: 2899656.0813648296
[2025-11-27 14:35:08] 2025-11-27 19:34:33,158 | INFO     | intersect: -12672214261.252312
[2025-11-27 14:35:08] 2025-11-27 19:34:33,159 | INFO     | chi2: 38.528311600033334
[2025-11-27 14:35:08] 2025-11-27 19:34:33,159 | INFO     | current chi2=38.528311600033334 (change=10.876851655695646 %)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,159 | INFO     | left removable region: 10
[2025-11-27 14:35:08] 2025-11-27 19:34:33,159 | INFO     | sum of square deviations: 449788907901.1695
[2025-11-27 14:35:08] 2025-11-27 19:34:33,174 | INFO     | sum of deviations: 3348733340246.5117
[2025-11-27 14:35:08] 2025-11-27 19:34:33,174 | INFO     | mean x: 1764237137.1289752
[2025-11-27 14:35:08] 2025-11-27 19:34:33,174 | INFO     | mean y: 2922426.051236749
[2025-11-27 14:35:08] 2025-11-27 19:34:33,174 | INFO     | intersect: -13132038479.88331
[2025-11-27 14:35:08] 2025-11-27 19:34:33,175 | INFO     | chi2: 30.57789690746771
[2025-11-27 14:35:08] 2025-11-27 19:34:33,175 | INFO     | current memory leak: 7.45 B/s (using 1132 data points, chi2=30.58)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | could have reported an average CPU frequency of 3739 MHz (42 samples)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | ..............................
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | . Timing measurements:
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | . get job = 0 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | . initial setup = 7 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | . payload setup = 53 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | . stage-in = 0 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,176 | INFO     | . payload execution = 70039 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,177 | INFO     | . stage-out = 6 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,177 | INFO     | . log creation = 0 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,177 | INFO     | ..............................
[2025-11-27 14:35:08] 2025-11-27 19:34:33,235 | INFO     | 
[2025-11-27 14:35:08] 2025-11-27 19:34:33,235 | INFO     | job summary report
[2025-11-27 14:35:08] 2025-11-27 19:34:33,235 | INFO     | --------------------------------------------------
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | PanDA job id: 6898377042
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | task id: 47556173
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | errors: (none)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | pilot state: finished 
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | transexitcode: 0
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | exeerrorcode: 0
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | exeerrordiag: 
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | exitcode: 0
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | exitmsg: OK
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | cpuconsumptiontime: 146545 s
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | nevents: 1000
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | neventsw: 0
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | pid: 647637
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | pgrp: 647637
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | corecount: 8
[2025-11-27 14:35:08] 2025-11-27 19:34:33,236 | INFO     | event service: False
[2025-11-27 14:35:08] 2025-11-27 19:34:33,237 | INFO     | sizes: {0: 2283487, 1: 2284172, 2: 2284371, 13: 2284371, 24: 2284427, 31: 2284717, 35: 2284873, 70098: 2341899, 70106: 2350949, 70132: 2351139}
[2025-11-27 14:35:08] 2025-11-27 19:34:33,238 | INFO     | --------------------------------------------------
[2025-11-27 14:35:08] 2025-11-27 19:34:33,238 | INFO     | 
[2025-11-27 14:35:08] 2025-11-27 19:34:33,238 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 14:35:08] 2025-11-27 19:34:33,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:35:08] 2025-11-27 19:34:33,337 | INFO     | job 6898377042 has completed (purged errors)
[2025-11-27 14:35:08] 2025-11-27 19:34:33,338 | INFO     | overall cleanup function is called
[2025-11-27 14:35:08] 2025-11-27 19:34:34,359 | INFO     | --- collectZombieJob: --- 10, [647637]
[2025-11-27 14:35:08] 2025-11-27 19:34:34,359 | INFO     | zombie collector waiting for pid 647637
[2025-11-27 14:35:08] 2025-11-27 19:34:34,360 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:35:08] 2025-11-27 19:34:34,360 | INFO     | collected zombie processes
[2025-11-27 14:35:08] 2025-11-27 19:34:34,360 | INFO     | will attempt to kill all subprocesses of pid=647637
[2025-11-27 14:35:08] 2025-11-27 19:34:35,022 [wrapper] supervise_pilot (15 min periods counter: 79)
[2025-11-27 14:35:08] 2025-11-27 19:34:35,131 | INFO     | process IDs to be killed: [647637] (in reverse order)
[2025-11-27 14:35:08] 2025-11-27 19:34:35,502 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:35:08] 2025-11-27 19:34:35,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:35:08] 2025-11-27 19:34:35,522 | INFO     | did not find any defunct processes belonging to 647637
[2025-11-27 14:35:08] 2025-11-27 19:34:35,542 | INFO     | did not find any defunct processes belonging to 647637
[2025-11-27 14:35:08] 2025-11-27 19:34:35,543 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:35:08] 2025-11-27 19:34:35,543 | INFO     | ready for new job
[2025-11-27 14:35:08] 2025-11-27 19:34:35,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:35:08] 2025-11-27 19:34:35,545 | INFO     | ***************************************
[2025-11-27 14:35:08] 2025-11-27 19:34:35,545 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:35:08] 2025-11-27 19:34:35,545 | INFO     | ***************************************
[2025-11-27 14:35:08] 2025-11-27 19:34:35,545 | INFO     | 
[2025-11-27 14:35:08] 2025-11-27 19:34:35,550 | INFO     | architecture information:
[2025-11-27 14:35:08] 2025-11-27 19:34:35,550 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:35:08] 2025-11-27 19:34:35,582 | INFO     | cat /etc/os-release:
[2025-11-27 14:35:08] NAME="CentOS Linux"
[2025-11-27 14:35:08] VERSION="7 (Core)"
[2025-11-27 14:35:08] ID="centos"
[2025-11-27 14:35:08] ID_LIKE="rhel fedora"
[2025-11-27 14:35:08] VERSION_ID="7"
[2025-11-27 14:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:35:08] ANSI_COLOR="0;31"
[2025-11-27 14:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:35:08] HOME_URL="https://www.centos.org/"
[2025-11-27 14:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:35:08] 
[2025-11-27 14:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:35:08] 
[2025-11-27 14:35:08] 2025-11-27 19:34:35,583 | INFO     | ***************************************
[2025-11-27 14:35:08] 2025-11-27 19:34:36,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 14:35:08] 2025-11-27 19:34:36,131 | INFO     | sufficient remaining disk space (164565614592 B)
[2025-11-27 14:35:08] 2025-11-27 19:34:36,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:35:08] 2025-11-27 19:34:36,131 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:35:08] 2025-11-27 19:34:36,131 | INFO     | update_server=False
[2025-11-27 14:35:08] 2025-11-27 19:34:36,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:35:08] 2025-11-27 19:34:36,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:35:08] 2025-11-27 19:34:36,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:35:08] 2025-11-27 19:34:36,423 | INFO     | aborting loop
[2025-11-27 14:35:08] 2025-11-27 19:34:36,865 | INFO     | all data control threads have been joined
[2025-11-27 14:35:08] 2025-11-27 19:34:37,153 | INFO     | [job] validate thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:37,158 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:37,167 | INFO     | all job control threads have been joined
[2025-11-27 14:35:08] 2025-11-27 19:34:37,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:35:08] 2025-11-27 19:34:37,321 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:37,430 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:37,539 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:37,565 | INFO     | all payload control threads have been joined
[2025-11-27 14:35:08] 2025-11-27 19:34:37,872 | INFO     | [data] control thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:38,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:38,173 | INFO     | [job] control thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:38,177 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:38,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:35:08] 2025-11-27 19:34:38,384 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:38,417 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:38,449 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:38,571 | INFO     | [payload] control thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:39,253 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:39,272 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:40,157 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:35:08] 2025-11-27 19:34:43,649 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:35:08] 2025-11-27 19:34:44,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009561917248)>', '<ExcThread(monitor, started 140009071957760)>']
[2025-11-27 14:35:08] 2025-11-27 19:34:49,618 | INFO     | all workflow threads have been joined
[2025-11-27 14:35:08] 2025-11-27 19:34:49,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:35:08] 2025-11-27 19:34:49,619 | INFO     | traces error code: 0
[2025-11-27 14:35:08] 2025-11-27 19:34:49,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:35:08] 2025-11-27 19:35:06,836 | INFO     | PID=632146 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 14:35:08] 2025-11-27 19:35:06,836 | INFO     | .. there are 30 such processes running
[2025-11-27 14:35:08] 2025-11-27 19:35:06,836 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:35:08] 2025-11-27 19:35:06,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:35:08] 2025-11-27 19:35:06,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:35:08] 2025-11-27 19:35:06,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:35:08] 2025-11-27 19:35:06,837 | INFO     | [monitor] control thread has ended
[2025-11-27 14:35:08] 2025-11-27 19:35:07,234 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:35:08] 2025-11-27 19:35:07,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:35:08] 2025-11-27 19:35:07,269 [wrapper] pilotpid: 632146
[2025-11-27 14:35:08] 2025-11-27 19:35:07,283 [wrapper] Pilot exit status: 0
[2025-11-27 14:35:08] 2025-11-27 19:35:07,454 [wrapper] pandaids: 6898377042
[2025-11-27 14:35:08] 2025-11-27 19:35:07,597 [wrapper] cleanup supervisor_pilot 3114887 632147
[2025-11-27 14:35:08] 2025-11-27 19:35:07,611 [wrapper] Test setup, not cleaning
[2025-11-27 14:35:08] 2025-11-27 19:35:07,665 [wrapper] apfmon messages muted
[2025-11-27 14:35:08] 2025-11-27 19:35:07,705 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:35:08] 2025-11-27 19:35:07,712 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:35:08]  *** Error codes and diagnostics ***
[2025-11-27 14:35:08]     "exeErrorCode": 0,
[2025-11-27 14:35:08]     "exeErrorDiag": "",
[2025-11-27 14:35:08]     "pilotErrorCode": 0,
[2025-11-27 14:35:08]     "pilotErrorDiag": "",
[2025-11-27 14:35:08]  *** Listing of results directory ***
[2025-11-27 14:35:08] total 1314812
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:04 pilot3.tar.gz
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:07 queuedata.json
[2025-11-27 14:35:08] -rwx------. 1 boincer umatlas     36292 Nov 26 11:08 runpilot2-wrapper.sh
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:35:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:03 run_atlas
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:03 job.xml
[2025-11-27 14:35:08] -rw-r--r--. 2 boincer umatlas 409250290 Nov 26 19:03 EVNT.47483658._003200.pool.root.1
[2025-11-27 14:35:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:03 start_atlas.sh
[2025-11-27 14:35:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:03 shared
[2025-11-27 14:35:08] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 19:03 input.tar.gz
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:03 boinc_lockfile
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 19:03 pandaJob.out
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas        57 Nov 26 19:03 setup.sh.local
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas    991538 Nov 26 19:04 agis_schedconf.cvmfs.json
[2025-11-27 14:35:08] drwx------. 5 boincer umatlas      4096 Nov 26 19:04 pilot3
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:50 boinc_task_state.xml
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 14:31 init_data.xml
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas 910673425 Nov 27 14:32 HITS.47556173._001564.pool.root.1
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas      1077 Nov 27 14:33 memory_monitor_summary.json
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas   2247465 Nov 27 14:34 log.47556173._001564.job.log.tgz.1
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas      7959 Nov 27 14:34 heartbeat.json
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas       822 Nov 27 14:35 pilotlog.txt
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas        95 Nov 27 14:35 pilot_heartbeat.json
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:35 boinc_mmap_file
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:35 wrapper_checkpoint.txt
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas   9018645 Nov 27 14:35 log.47556173._001564.job.log.1
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas       353 Nov 27 14:35 output.list
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:35 runtime_log
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas  11284480 Nov 27 14:35 result.tar.gz
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 14:35 runtime_log.err
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas       666 Nov 27 14:35 IfkMDm3EXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmI1JKDmcjlhIm.diag
[2025-11-27 14:35:08] -rw-r--r--. 1 boincer umatlas     21771 Nov 27 14:35 stderr.txt
[2025-11-27 14:35:08] HITS file was successfully produced:
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas 910673425 Nov 27 14:32 shared/HITS.pool.root.1
[2025-11-27 14:35:08]  *** Contents of shared directory: ***
[2025-11-27 14:35:08] total 1300616
[2025-11-27 14:35:08] -rw-r--r--. 2 boincer umatlas 409250290 Nov 26 19:03 ATLAS.root_0
[2025-11-27 14:35:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:03 start_atlas.sh
[2025-11-27 14:35:08] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 19:03 input.tar.gz
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas 910673425 Nov 27 14:32 HITS.pool.root.1
[2025-11-27 14:35:08] -rw-------. 1 boincer umatlas  11284480 Nov 27 14:35 result.tar.gz
14:35:09 (623827): run_atlas exited; CPU time 147416.380046
14:35:09 (623827): called boinc_finish(0)

</stderr_txt>
]]>

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